Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0354
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.3  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   3.1  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   7.1  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 6   CIKILYLPTITRYWSQFSLKVLGLL 80
           C+++L +  +T+YW   S  V  LL
Sbjct: 582 CVRLLRVFKVTKYWQSLSNLVASLL 606


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 409 HGVERDHRGRQSGFEKRQRKP 471
           HGV R    R+ G + R+RKP
Sbjct: 208 HGVNRPLAMRKDGIQTRKRKP 228


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 581 RSLSGPSKNASVRLMKTSRGKVASRSNSTQSF 676
           R L  P+KNAS R   TS   V   +N   +F
Sbjct: 484 RQLGVPTKNASFRNCVTSAACVLGPANPKTNF 515


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,587
Number of Sequences: 2352
Number of extensions: 12756
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)