Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0353
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.4  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         23   1.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.6  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = +3

Query: 579 VGALTPFFWLFEEREK 626
           +G+L PF WLF+++++
Sbjct: 318 LGSLPPFKWLFKKKKR 333


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 211 KTGRKESTQHDPELRPQ 261
           KTGR++ T+ +P  RP+
Sbjct: 220 KTGREDQTRRNPYYRPR 236


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 397 LPYFDRLDYVSMMCNEQCYSLAVEKLLNI 483
           +P+   + ++ ++  EQ Y L +EK  NI
Sbjct: 304 IPFRVFILWIILVPEEQVYHLEIEKYYNI 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,086
Number of Sequences: 336
Number of extensions: 3571
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)