Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0352
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.5  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   5.9  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   7.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = +2

Query: 134  PAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTNLRVSNSSLKSCE 292
            P  +KP+   E  Q+ P P   +  ++  L E  K+Y    L   N   K C+
Sbjct: 1094 PEVDKPSQPCEPGQYVPDPHNCNAYYRCVLGELRKQYCAGGLH-WNKERKICD 1145


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 162 MRMYNSRLYLNQLMKIFRMILTKKKKNISKLI 257
           M +Y+S   L  + KIF ++  KK   + KL+
Sbjct: 1   MSLYSSINSLVLISKIFALLPVKKHHRLEKLV 32


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = +3

Query: 363 CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCH 461
           C  C+R  G      +  + H   +   CQ CH
Sbjct: 137 CEVCNRSFGYKHVLQNHERTHTGEKPFECQECH 169



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 7/58 (12%)
 Frame = +3

Query: 321 FVLDLNTITSQRLH-------CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCHIFYN 473
           F  D +  T  RLH       C  CDR     +     +++H   R   C+ C + ++
Sbjct: 172 FTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVHTGERPYGCEHCSMKFS 229


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 14/54 (25%), Positives = 22/54 (40%)
 Frame = +2

Query: 119 SEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTNLRVSNSSL 280
           +  A PAP +  ++       P P       +D LN  +    + N R S+ SL
Sbjct: 40  NSAASPAPPEEEAASPTPGDVPTPSSPRSISEDPLNCRDLPNSRCNSRESSDSL 93


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 625 ISNIFDCPKFRLIHFAQKNMRTVRTTEYLSSLA 527
           +SN    P+F+++   Q+ M    TT   S LA
Sbjct: 26  VSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLA 58


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 299 SNSHTTSTKSCSP 261
           SNS+T   KSC P
Sbjct: 58  SNSYTPKIKSCRP 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,865
Number of Sequences: 336
Number of extensions: 3381
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)