Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0352
(734 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754... 45 5e-05
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13... 34 0.10
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204... 34 0.10
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 33 0.24
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 32 0.41
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499... 32 0.41
01_07_0294 + 42571700-42573373,42573653-42573720,42573785-425738... 32 0.54
11_01_0038 - 284152-284202,285014-285091,285215-285218,285669-28... 31 0.72
03_06_0411 + 33741903-33742163,33742990-33743168,33743342-337434... 30 1.7
02_05_0618 + 30400338-30400452,30400553-30400692,30400805-304010... 30 1.7
12_01_0036 - 299140-299190,300001-300078,300202-300205,300657-30... 30 2.2
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 30 2.2
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047... 29 2.9
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 29 2.9
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 29 2.9
02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711 29 3.8
08_02_0937 + 22801526-22802461 29 5.1
05_07_0173 + 28140484-28140869,28141079-28141481,28141719-281417... 29 5.1
01_01_1206 - 9702128-9702184,9702272-9702323,9702410-9702471,970... 29 5.1
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 28 6.7
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 28 6.7
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 28 8.8
06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482... 28 8.8
>10_08_0259 +
16274430-16274747,16275180-16275242,16275329-16275424,
16275526-16275618,16276415-16276605,16276684-16276921,
16277805-16277900,16278324-16278404,16278532-16278939,
16279048-16279331,16279460-16279547,16279630-16279830,
16280032-16280118,16280119-16280238,16280536-16280708,
16281914-16282055,16282292-16282414,16282601-16282656,
16282735-16283038,16283154-16283283,16283491-16283549,
16283829-16284061,16285480-16285527,16285765-16285843,
16285925-16286169,16286338-16286722
Length = 1446
Score = 45.2 bits (102), Expect = 5e-05
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +3
Query: 363 CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCH-IFYNSGEFEKGDDGSDFTVDGVAKED 539
CT C L N+ V HP+L ++C +C + E G T K +
Sbjct: 491 CTICTEML-----NVPEVHRHPVLDVIICGSCRFLVIEKNRLEDPVSGGYCT--WCVKSE 543
Query: 540 KYSVVLTVLMFFCAKCIKRNFGQSKILEIKCVDDWKCFKCNPECLK 677
+ + + FC C+ +NFG+ + E + V W+C C P L+
Sbjct: 544 QLQSCSSCKLLFCRNCLSKNFGEEGLSEAR-VAGWQCCCCLPSQLE 588
>06_01_0007 +
130582-131544,132187-132264,132615-132732,133228-133271,
133389-133448,133536-133588,133671-133837,133963-134167,
134989-135046,135225-135281,135363-135608,135938-136002,
136090-136158,136238-136331,136467-136607,137159-137304,
137452-138110,138222-138335,138406-138560
Length = 1163
Score = 34.3 bits (75), Expect = 0.10
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVF 574
CR CGQGG +F C CP F
Sbjct: 473 CRECGQGGDIFPCKMCPRSF 492
>04_04_1694 - 35419278-35419565,35419744-35419861,35420404-35420490,
35420909-35420931,35421647-35421843,35421964-35422159,
35422382-35422481,35423288-35423374,35424053-35424282,
35424678-35424763,35425148-35425271,35425415-35428573,
35430014-35430019
Length = 1566
Score = 34.3 bits (75), Expect = 0.10
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVF 574
C +CG GG++ CC +CP +
Sbjct: 1028 CGFCGDGGELLCCDNCPSTY 1047
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 33.1 bits (72), Expect = 0.24
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVF 574
C CG GG + CC +CP F
Sbjct: 735 CGICGDGGDLLCCDNCPSTF 754
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 32.3 bits (70), Expect = 0.41
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCP 565
C CG GG++ CC +CP
Sbjct: 1047 CGLCGDGGELICCDNCP 1063
>03_05_1122 + 30546314-30549277,30549615-30549693,30549857-30549945,
30550422-30550538,30550873-30551111,30552279-30552365,
30552732-30552831,30553319-30553532,30553617-30553777
Length = 1349
Score = 32.3 bits (70), Expect = 0.41
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVF 574
C CG GG + CC CP F
Sbjct: 961 CGICGDGGNLICCDGCPSTF 980
>01_07_0294 +
42571700-42573373,42573653-42573720,42573785-42573819,
42573988-42574061,42574491-42574726,42574958-42575044,
42575356-42575455,42575584-42576003
Length = 897
Score = 31.9 bits (69), Expect = 0.54
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVF 574
C C GGQ+ CC CP F
Sbjct: 531 CGVCADGGQLLCCDTCPSTF 550
>11_01_0038 -
284152-284202,285014-285091,285215-285218,285669-285769,
286642-287151,287550-288032,288668-289156
Length = 571
Score = 31.5 bits (68), Expect = 0.72
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 3/33 (9%)
Frame = +2
Query: 152 ASSDENVQ-FPPLPEPTDEDFQ--DDLNEEEKE 241
ASS +VQ +P L E D+DFQ DDL++E++E
Sbjct: 4 ASSPASVQDYPDLQEDDDDDFQDDDDLDDEDEE 36
>03_06_0411 +
33741903-33742163,33742990-33743168,33743342-33743426,
33743506-33743822,33743983-33744106,33744810-33744902,
33745296-33745364,33745654-33745704,33745705-33745854,
33745904-33746125,33746413-33746568,33746716-33746823,
33746992-33747126,33747209-33747364,33747544-33747664,
33748182-33748267
Length = 770
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 179 PPLPEPTDEDFQDDLNEEEKE 241
PP P P D+D Q+D +E+E+E
Sbjct: 420 PPPPPPQDQDSQEDQDEDEEE 440
>02_05_0618 +
30400338-30400452,30400553-30400692,30400805-30401044,
30401157-30401693
Length = 343
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 128 ACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTNLRVSNSS 277
A P PA++D V P EP E+ E++++ +K R+S S
Sbjct: 187 AVDVPGLPAAADVKVAVPDAEEPALEEAAAAFEEQQEQQVKAEDRLSTGS 236
>12_01_0036 -
299140-299190,300001-300078,300202-300205,300657-300757,
301636-302145,302552-303034,303672-304163
Length = 572
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 5/35 (14%)
Frame = +2
Query: 152 ASSDENVQ-FPPLPEPTDEDFQ----DDLNEEEKE 241
ASS +VQ +P L E D+DFQ DDL++E++E
Sbjct: 4 ASSPASVQDYPDLQEDDDDDFQDDDDDDLDDEDEE 38
>11_01_0298 -
2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVF 574
CR CG G + CC CP +
Sbjct: 547 CRICGMDGTLVCCDGCPWAY 566
>12_02_0228 +
15903452-15903812,15904153-15904202,15904615-15904713,
15907146-15907415,15908045-15908125,15909033-15909599,
15909677-15910053,15910326-15911613
Length = 1030
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 143 EKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTNLRVSNSSLKSCENYFR 304
E+ S E + PP P P +DD+ EEE+E T V+N+S K ++ R
Sbjct: 100 EEAPSQAETLDTPPSPPPPP--LEDDIPEEEEEGTGT---VANNSAKDGDDILR 148
>07_03_1575 -
27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 29.5 bits (63), Expect = 2.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVF 574
C CG G + CC CP F
Sbjct: 446 CYLCGMDGNLLCCDGCPAAF 465
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 122 EGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEY 244
E + + P ++ + +Q PP PT+ DD++ E++EY
Sbjct: 375 EDKAQSSDNPNNAADEIQSPPSSSPTES--TDDISSEDEEY 413
>02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711
Length = 372
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/79 (31%), Positives = 34/79 (43%)
Frame = +2
Query: 14 DD*VLLQTLSKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPE 193
DD L+ TL + KH ++R P + I S A PA + D P+ E
Sbjct: 36 DDARLVSTLDEIKHVEEEVLRSPRRRRVRRAPEIAS--AAPAVDDWHEPD------PIEE 87
Query: 194 PTDEDFQDDLNEEEKEYIK 250
DED DD EE + I+
Sbjct: 88 EQDEDDDDDAREERRARIR 106
>08_02_0937 + 22801526-22802461
Length = 311
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 107 EIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKE 241
E ++ E P PE +E V PP P P F D + +++E
Sbjct: 51 EFLEEENPNPPPEP--EEEEEVSSPPPPPPPPPGFLSDSSSDDEE 93
>05_07_0173 + 28140484-28140869,28141079-28141481,28141719-28141781,
28142350-28142535,28144695-28145076,28145689-28145780,
28145988-28146737,28146969-28147100,28147149-28147247,
28147977-28148132,28150187-28150317,28150798-28151254,
28151327-28151668,28152137-28153001,28153112-28153170,
28153806-28154261,28154835-28154873,28155016-28155201
Length = 1727
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 26 LLQTLSKYKHFYILLMRIPNDLG-TTMSEIIKSEGACPAPEK 148
LL+ L+ KH Y+ + P + TT ++K G C P K
Sbjct: 1671 LLEQLAVDKHIYVRVFDEPVPVAPTTFQSLLKQHGHCKEPSK 1712
>01_01_1206 -
9702128-9702184,9702272-9702323,9702410-9702471,
9702578-9702665,9703027-9703095,9703224-9703281,
9703895-9703996,9704075-9704179,9704273-9704624,
9706005-9706100,9706427-9706501,9707192-9707370,
9707501-9707740,9707922-9708017,9708193-9708306,
9708428-9708527
Length = 614
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 468 YNSGEFEKGDDGSDFTVDGVA 530
Y S + +KGDD SDFT G A
Sbjct: 405 YKSDDDQKGDDHSDFTASGQA 425
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 86 DLGTTMSEI-IKSEGACPAPEKPASSDENVQ-FPPLPEPTDEDFQDDL 223
D G T+ E+ +KS P+KP+S+D ++ P L PT D L
Sbjct: 672 DEGATLPELPLKSPIIVALPDKPSSADRSISTIPILQMPTASSPNDSL 719
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 28.3 bits (60), Expect = 6.7
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVFLCE 583
C C GG + CC CP + E
Sbjct: 35 CVECDLGGNLLCCDSCPRTYHLE 57
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Frame = +3
Query: 573 FCAKCIKRNFGQSKILEIK-----CVDDWKCFKCNP 665
FCA CIK + + + E++ C + C +CNP
Sbjct: 193 FCAACIKNKYPEMQQAEVRDKCPFCRNICNCTRCNP 228
>06_03_1507 -
30646168-30646254,30646350-30646490,30648109-30648202,
30648445-30648509,30648934-30649176,30649442-30649499,
30649957-30650037,30650323-30650533,30650975-30651141,
30651216-30651268,30651600-30651681,30651765-30651914,
30652027-30652111,30652189-30652393,30652502-30652573,
30652911-30653456
Length = 779
Score = 27.9 bits (59), Expect = 8.8
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVF 574
C C GG++ C CP F
Sbjct: 432 CSICSDGGELLLCDSCPRAF 451
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,593,827
Number of Sequences: 37544
Number of extensions: 326411
Number of successful extensions: 1407
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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