Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0352
(734 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41) 67 1e-11
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.060
SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18) 35 0.060
SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_13064| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 31 1.3
SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10) 30 1.7
SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 1.7
SB_389| Best HMM Match : zf-C2H2 (HMM E-Value=1.8e-29) 30 1.7
SB_20597| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.0
SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.9
SB_56037| Best HMM Match : RepA_N (HMM E-Value=3.7) 29 3.9
SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 3.9
SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_44729| Best HMM Match : SET (HMM E-Value=0) 29 5.2
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 29 5.2
SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12) 29 5.2
SB_35454| Best HMM Match : SRP-alpha_N (HMM E-Value=6.1) 28 6.8
SB_25383| Best HMM Match : Cyclin_N (HMM E-Value=0) 28 6.8
SB_8124| Best HMM Match : Ribosomal_L16 (HMM E-Value=0.55) 28 6.8
SB_5689| Best HMM Match : Ribosomal_L34e (HMM E-Value=0.34) 28 6.8
SB_3742| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_41143| Best HMM Match : Tropomodulin (HMM E-Value=0.09) 28 6.8
SB_32646| Best HMM Match : IQ (HMM E-Value=8.5e-07) 28 6.8
SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_47228| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_41150| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_27651| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 9.0
SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_39230| Best HMM Match : SNF2_N (HMM E-Value=1.40004e-41)
Length = 1682
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Frame = +3
Query: 351 QRLHCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCHIFYNSGEFEKGDDGSDFTVDGVA 530
+R+ CTAC RH+ S + R HP L LVC+ C+ +YNSG F + + G +
Sbjct: 39 KRVTCTACGRHINPSHGKILR---HPTLNVLVCKKCNQYYNSGPFTRDEYGIEEQCRWCG 95
Query: 531 KEDKYSVVLTVLMFFCAKCIKRNFGQSKILEIKCVDD---WKCFKC 659
FC CIKRN G++ + E+ D W CF C
Sbjct: 96 DGGALICCDKCEKAFCQPCIKRNCGKAYLKEVMNAPDDYHWNCFSC 141
Score = 37.1 bits (82), Expect = 0.015
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVF 574
CRWCG GG + CC C F
Sbjct: 91 CRWCGDGGALICCDKCEKAF 110
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 35.1 bits (77), Expect = 0.060
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YCR C GGQ+ CC CP +
Sbjct: 451 YCRVCKDGGQLLCCDKCPMAY 471
>SB_36593| Best HMM Match : PHD (HMM E-Value=3.4e-18)
Length = 134
Score = 35.1 bits (77), Expect = 0.060
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YCR C GGQ+ CC CP +
Sbjct: 13 YCRVCKDGGQLLCCDKCPMAY 33
>SB_24946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 822
Score = 32.7 bits (71), Expect = 0.32
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHVF 574
C CG+GG + CC CP F
Sbjct: 52 CDSCGEGGDLLCCDQCPCAF 71
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 31.9 bits (69), Expect = 0.55
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
+CR CG+ G + CC CP V+
Sbjct: 269 HCRSCGKMGDLLCCEICPGVY 289
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 31.9 bits (69), Expect = 0.55
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 512 YCRWCGQGG-QVFCCSDCPHVF 574
YC C QGG ++ CC CP V+
Sbjct: 988 YCHECEQGGDELICCDGCPRVY 1009
>SB_13064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 354 RLHCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC 458
RL CT C R S S S ++IH + + C+ C
Sbjct: 365 RLKCTLCRRGFNSRSNLRSHMRIHTMEKPFQCKFC 399
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 128 ACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTNLRV 265
A AP K + ++ Q PL + + DF + +E+EK+++ + R+
Sbjct: 516 ASKAPSKEVAPEKREQPQPLSQAIEVDFPLETSEQEKQFVDVHGRI 561
>SB_282| Best HMM Match : zf-CCCH (HMM E-Value=2.4e-10)
Length = 508
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +2
Query: 65 LLMRIPNDLGTTMSEIIKSEGACPAPE---KPASSDENVQFPPLPEPTDEDFQDDLNEEE 235
L+++ PND M + + CP E +PA E+V P + + N+E
Sbjct: 257 LVVKFPNDYPKVMRAEEEEKNKCPCSEGHAEPAQHTEHVNKPQHNPRQGNSTRKERNQER 316
Query: 236 KEYIKTN-LRVSNSSLK 283
+E + + L VSN K
Sbjct: 317 RELVLGDFLAVSNKQQK 333
>SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 539
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 318 CFVLDLNTITSQRLH-CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC 458
C + + T T ++ H CT C + S S ++H L+ C+ C
Sbjct: 367 CLTVHIRTHTGEKPHKCTQCGKSFTSKSDLTKHSRVHSGLKPFKCKEC 414
>SB_389| Best HMM Match : zf-C2H2 (HMM E-Value=1.8e-29)
Length = 383
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 348 SQRLHCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCH 461
++R C CD+ G SS ++ H R CQ C+
Sbjct: 260 TKRFQCVHCDKSFGKSSHLRDHIRTHTGDRPFRCQYCN 297
>SB_20597| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 268
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 312 KLCFVLDLNTITSQRLH-CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC 458
K C T T +R + C CD + S + + H ++ +C+TC
Sbjct: 90 KRCLTKHFRTHTGERPYQCAMCDMAFATLSGRIQHYRSHAGVKPYLCETC 139
>SB_58993| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 541
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 615 ILEIKCVDDWKCFKCNPECLKTPACCMLGLCFNI 716
+L I C C EC++TP C G C NI
Sbjct: 255 LLSILCSAYTLCILDKNECVETPGICKTGNCTNI 288
>SB_56037| Best HMM Match : RepA_N (HMM E-Value=3.7)
Length = 200
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 86 DLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDD 220
+L +E S C P+ + N++ PP+P P D++ +D
Sbjct: 144 ELSMECAEYQDSFECCRVPQTNEQDNGNIKSPPVPVPGDDEVTND 188
>SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 68 LMRIPNDLGT-TMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEK 238
LM+I + + T + I++ P++P+ DE + PP+P P++ N + K
Sbjct: 71 LMQIASPTASQTFTPILQPSYQPTTPQQPSLLDEPIVTPPIPSPSESSSPKRPNRKTK 128
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 29.1 bits (62), Expect = 3.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCP 565
C C +GG++ CC CP
Sbjct: 1730 CAVCSEGGELLCCDICP 1746
>SB_8609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 985
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 86 DLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDD 220
+L +E S C P+ + N++ PP+P P D++ +D
Sbjct: 906 ELSMECAEYQDSFECCRVPQTNEQDNGNIKSPPVPVPGDDEVTND 950
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
+C C GG + CC CP F
Sbjct: 569 WCFVCSIGGTLICCESCPAAF 589
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 621 EIKCVDDWKCFKCN-PECLKTPACCMLGLC 707
E C WK C+ P+CL TP C G+C
Sbjct: 228 ECDCYRGWKGDGCHVPDCLGTPDCNDNGVC 257
Score = 28.7 bits (61), Expect = 5.2
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = +2
Query: 68 LMRIPNDLGTTMSEIIKSEGAC-PA----PEKPASSDENVQFPPLPEPTDEDFQDDLNEE 232
L + N GTT ++I + P+ P + SSD + F P+ P D + N E
Sbjct: 3546 LWKFNNGDGTTAKDLIAANDLIFPSYPLGPPEWRSSDAPIDFVPVQNPNDNNVTLIANAE 3605
Query: 233 EKEYIKTNLRVSNSSLKSCENYFRNIKIMFCFR 331
E L +S K+C N+ + F FR
Sbjct: 3606 E---ACVRLILSGPLFKACSE-LGNVTLQFFFR 3634
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 515 CRWCGQGGQVFCCSDCPHV 571
CR CG G + CC++C V
Sbjct: 539 CRTCGLTGSLCCCTECARV 557
>SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1511
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 294 ITSET*KLCFVLD-LNTITSQRLHCTACDR-HLGSSSRNLSRVKIHPLLRTLVCQTC 458
I E+ +C + D L T+T +R HC AC + + S N + ++ VC++C
Sbjct: 1295 IRDESVTMCMLCDALFTLTRRRHHCRACGGIYCNACSHNKAPLEYRDGKLCRVCRSC 1351
>SB_16515| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
Length = 917
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 92 GTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEE-EKEYIKTNLRVS 268
GT SE P E+ A S N PP+ P +ED DD +EE E E +T L+ S
Sbjct: 548 GTPPEYRFPSEEPSPYAEENAISRSN---PPVYTPKEEDDDDDDDEESETEDSQTTLQDS 604
>SB_35454| Best HMM Match : SRP-alpha_N (HMM E-Value=6.1)
Length = 211
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 146 KPASSDENVQFP---PLPEPTDEDFQDDLNEEEKEYIKTNLRVSNSSLKSCENYFRNIKI 316
KP + FP P P D +DD+ E E+EY+ ++ S +K ++I
Sbjct: 86 KPKNESVRPSFPDTQPGPAGLDLGEEDDIIEIEEEYVSLSMTKKKSDVKDTAEDSKSIGS 145
Query: 317 MF 322
+F
Sbjct: 146 LF 147
>SB_25383| Best HMM Match : Cyclin_N (HMM E-Value=0)
Length = 561
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 128 ACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNE-EEKEYIKTNL 259
A P PE+PAS E + E +E F D+ + + +Y K L
Sbjct: 97 ALPKPERPASKPEPMDMADFSEALNECFPTDVEDIDSGDYDKPQL 141
>SB_8124| Best HMM Match : Ribosomal_L16 (HMM E-Value=0.55)
Length = 285
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 6/45 (13%)
Frame = +2
Query: 197 TDEDFQDDLNEEEKEY------IKTNLRVSNSSLKSCENYFRNIK 313
TD+D Q +N EKE+ KTN+ + N++ KS N+ N K
Sbjct: 43 TDKDLQTHINALEKEWGLTVNLDKTNIMIFNNTGKSLNNHRFNYK 87
>SB_5689| Best HMM Match : Ribosomal_L34e (HMM E-Value=0.34)
Length = 524
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = -2
Query: 706 QSPNIQHAGVFKHSGLHLKHFQSSTHLISNIFDCPKFRLIHFAQKNMRTVRTTE 545
QSP + +++H H +T P RL HF +TVRT +
Sbjct: 435 QSPPDRLCALYRHHPTDCAHCIDTTRQTVRTVQTPPDRLAHFTVTTRQTVRTVQ 488
>SB_3742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1494
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 525 VAKEDKYSVVLTVLMFFCAKCI 590
+A +KY V+ VLMFFC I
Sbjct: 1350 LANREKYMVIAAVLMFFCLSII 1371
>SB_41143| Best HMM Match : Tropomodulin (HMM E-Value=0.09)
Length = 771
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 570 FFCAKCIKRNFGQSKILEIKCVDDWKCFKC 659
+FCA + GQ ++E + + DW+ F+C
Sbjct: 210 YFCAVYLASRLGQG-VVEPELIGDWRLFEC 238
>SB_32646| Best HMM Match : IQ (HMM E-Value=8.5e-07)
Length = 465
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 607 CPKFRLIHFAQKNMRTVRTTEYLSSLATPSTVK 509
C F ++H + +M+T+ T +L S+ STV+
Sbjct: 289 CKLFGILHPSVSSMKTIEETTFLPSIGRMSTVR 321
>SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 200 DEDFQDDLNEEEKEYIKTNLRVSNSSLKSCENYFRNIK 313
D+D DD ++++ + I + + N+ C+N R +K
Sbjct: 628 DDDIDDDDDDDDDDDINILINILNNDNSYCQNTIRKLK 665
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +2
Query: 41 SKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDD 220
SK Y L + DLGT +S + S+ + P KP + + E + D
Sbjct: 5670 SKEAWVYDLKKLLKMDLGT-ISLTLSSKQSYEIPIKPTEDPSSPLVTAVKETVTSSYSDI 5728
Query: 221 LNEEEKEYI 247
E EK+Y+
Sbjct: 5729 FAEVEKQYV 5737
>SB_47228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +3
Query: 522 GVAKEDKYSVVLTVLMFFCAKCIKRNFGQSKILEIKCVDDWKCFKCNPECLKTPAC 689
G K++K+ V CAK + + +L IK V + F CN CL P C
Sbjct: 232 GARKDEKWMVRKKARSGRCAKRRQVDGEYLDLLVIKTVTAPRPFDCNLYCLAEPDC 287
>SB_41150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 140 PEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTNLRVSNSSLKSCENYFRNIKIM 319
P+K D+ P + +DED +D+L +EKE I ++ L C ++ ++ I+
Sbjct: 334 PKKKEEEDDEKSPPGIA--SDEDTEDELERQEKELIIK----GSALLAHCFHFLASLPIV 387
Query: 320 F 322
F
Sbjct: 388 F 388
>SB_27651| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 280
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 363 CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC-HIFYNSGEFEK 491
C C R GS+S +K H + C+ C FY G+ K
Sbjct: 177 CELCKRSFGSASGLRQHIKYHAEKKPHKCKQCFKEFYTRGDLTK 220
>SB_9857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1125
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YC C + G+V C CP VF
Sbjct: 484 YCWRCHRPGEVILCDFCPRVF 504
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,313,949
Number of Sequences: 59808
Number of extensions: 414883
Number of successful extensions: 1754
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1740
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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