Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0352
(734 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051699-1|AAK93123.1| 1125|Drosophila melanogaster LD24316p pro... 99 3e-21
AE013599-1370|AAM68703.1| 1125|Drosophila melanogaster CG8290-PB... 99 3e-21
AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA... 99 3e-21
BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p pro... 95 7e-20
AY071503-1|AAL49125.1| 627|Drosophila melanogaster RE55932p pro... 35 0.100
AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein. 35 0.100
AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA... 35 0.100
AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protei... 33 0.40
AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB... 33 0.40
AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA... 33 0.40
AY118843-1|AAM50703.1| 330|Drosophila melanogaster GM13395p pro... 32 0.93
AF210315-1|AAF19646.1| 1133|Drosophila melanogaster bonus protein. 32 0.93
AE014297-2826|AAF55786.2| 1133|Drosophila melanogaster CG5206-PA... 32 0.93
AE013599-807|AAF58976.3| 330|Drosophila melanogaster CG30342-PA... 32 0.93
BT015206-1|AAT94435.1| 932|Drosophila melanogaster RE62451p pro... 31 1.2
AY069054-1|AAL39199.1| 878|Drosophila melanogaster GH06635p pro... 31 1.2
AF233659-1|AAF42939.1| 1530|Drosophila melanogaster RECQ4 protein. 31 1.2
AF162795-1|AAD51936.1| 725|Drosophila melanogaster mutant nucle... 31 1.2
AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide e... 31 1.2
AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair e... 31 1.2
AE014298-874|AAF46150.2| 878|Drosophila melanogaster CG3815-PA ... 31 1.2
AE014296-1383|AAF50477.1| 1579|Drosophila melanogaster CG7487-PA... 31 1.2
AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-P... 31 1.2
AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-P... 31 1.2
AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-P... 31 1.2
AY060435-1|AAL25474.1| 308|Drosophila melanogaster LD46228p pro... 31 1.6
AE014298-764|AAF46054.1| 623|Drosophila melanogaster CG15776-PA... 31 1.6
AE014296-3536|AAF51720.1| 308|Drosophila melanogaster CG5683-PC... 31 1.6
AE014296-3535|AAF51722.1| 308|Drosophila melanogaster CG5683-PB... 31 1.6
AE014296-3534|AAF51721.1| 308|Drosophila melanogaster CG5683-PA... 31 1.6
AY119160-1|AAM51020.1| 152|Drosophila melanogaster RH09920p pro... 30 2.8
AY071001-1|AAL48623.1| 152|Drosophila melanogaster RE08888p pro... 30 2.8
AY061522-1|AAL29070.1| 447|Drosophila melanogaster LD47721p pro... 30 2.8
AE014297-1334|AAF54663.2| 447|Drosophila melanogaster CG14710-P... 30 2.8
AE014296-824|AAF47883.1| 158|Drosophila melanogaster CG1319-PA ... 30 2.8
BT025221-1|ABF17912.1| 1427|Drosophila melanogaster FI01019p pro... 30 3.8
AY118769-1|AAM50629.1| 414|Drosophila melanogaster GH11066p pro... 30 3.8
AY118404-1|AAM48433.1| 1016|Drosophila melanogaster RE61305p pro... 30 3.8
AE014297-4201|AAF56762.2| 1427|Drosophila melanogaster CG4976-PA... 30 3.8
AE014297-3783|AAF56455.2| 414|Drosophila melanogaster CG10560-P... 30 3.8
BT023142-1|AAY55558.1| 704|Drosophila melanogaster IP08936p pro... 29 5.0
BT022131-1|AAY51526.1| 704|Drosophila melanogaster IP08836p pro... 29 5.0
AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome r... 29 5.0
AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant ... 29 5.0
AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein. 29 5.0
AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,... 29 5.0
AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,... 29 5.0
AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,... 29 5.0
BT022160-1|AAY51554.1| 520|Drosophila melanogaster IP01388p pro... 29 6.6
AY069577-1|AAL39722.1| 714|Drosophila melanogaster LD31554p pro... 29 6.6
AE014298-690|AAF45994.2| 543|Drosophila melanogaster CG32772-PA... 29 6.6
AE014134-680|AAF51059.1| 714|Drosophila melanogaster CG3407-PA ... 29 6.6
U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade pro... 29 8.7
AY094874-1|AAM11227.1| 147|Drosophila melanogaster RE41137p pro... 29 8.7
AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-P... 29 8.7
AE014135-64|AAN06527.1| 147|Drosophila melanogaster CG32850-PA ... 29 8.7
>AY051699-1|AAK93123.1| 1125|Drosophila melanogaster LD24316p
protein.
Length = 1125
Score = 99 bits (238), Expect = 3e-21
Identities = 41/115 (35%), Positives = 65/115 (56%)
Frame = +3
Query: 330 DLNTITSQRLHCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCHIFYNSGEFEKGDDGSD 509
+++ + +++HCT C HLG++ S +K+HP+LR C CH FYNSGEF KG+DGS+
Sbjct: 55 NVDLVNQRKVHCTVCKLHLGTAPAAESNIKMHPILRVTHCVKCHDFYNSGEFSKGEDGSE 114
Query: 510 FTVDGVAKEDKYSVVLTVLMFFCAKCIKRNFGQSKILEIKCVDDWKCFKCNPECL 674
+ + T FC CI +N + I++I+ ++W CF C + L
Sbjct: 115 LYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNENWNCFSCTSKIL 169
>AE013599-1370|AAM68703.1| 1125|Drosophila melanogaster CG8290-PB,
isoform B protein.
Length = 1125
Score = 99 bits (238), Expect = 3e-21
Identities = 41/115 (35%), Positives = 65/115 (56%)
Frame = +3
Query: 330 DLNTITSQRLHCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCHIFYNSGEFEKGDDGSD 509
+++ + +++HCT C HLG++ S +K+HP+LR C CH FYNSGEF KG+DGS+
Sbjct: 55 NVDLVNQRKVHCTVCKLHLGTAPAAESNIKMHPILRVTHCVKCHDFYNSGEFSKGEDGSE 114
Query: 510 FTVDGVAKEDKYSVVLTVLMFFCAKCIKRNFGQSKILEIKCVDDWKCFKCNPECL 674
+ + T FC CI +N + I++I+ ++W CF C + L
Sbjct: 115 LYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNENWNCFSCTSKIL 169
>AE013599-1369|AAF58601.2| 1199|Drosophila melanogaster CG8290-PA,
isoform A protein.
Length = 1199
Score = 99 bits (238), Expect = 3e-21
Identities = 41/115 (35%), Positives = 65/115 (56%)
Frame = +3
Query: 330 DLNTITSQRLHCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCHIFYNSGEFEKGDDGSD 509
+++ + +++HCT C HLG++ S +K+HP+LR C CH FYNSGEF KG+DGS+
Sbjct: 55 NVDLVNQRKVHCTVCKLHLGTAPAAESNIKMHPILRVTHCVKCHDFYNSGEFSKGEDGSE 114
Query: 510 FTVDGVAKEDKYSVVLTVLMFFCAKCIKRNFGQSKILEIKCVDDWKCFKCNPECL 674
+ + T FC CI +N + I++I+ ++W CF C + L
Sbjct: 115 LYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNENWNCFSCTSKIL 169
>BT003195-1|AAO24950.1| 1199|Drosophila melanogaster RE53824p
protein.
Length = 1199
Score = 95.5 bits (227), Expect = 7e-20
Identities = 40/115 (34%), Positives = 64/115 (55%)
Frame = +3
Query: 330 DLNTITSQRLHCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCHIFYNSGEFEKGDDGSD 509
+++ + +++HCT C HLG++ S +K+HP+LR C CH FYNSGEF KG+DGS+
Sbjct: 55 NVDLVNQRKVHCTVCKLHLGTAPAAESNIKMHPILRVTHCVKCHDFYNSGEFSKGEDGSE 114
Query: 510 FTVDGVAKEDKYSVVLTVLMFFCAKCIKRNFGQSKILEIKCVDDWKCFKCNPECL 674
+ + T F CI +N + I++I+ ++W CF C + L
Sbjct: 115 LYCRWCGQGGEVYCCSTCPYVFYKSCIVKNLSKGVIVDIEQNENWNCFSCTSKIL 169
>AY071503-1|AAL49125.1| 627|Drosophila melanogaster RE55932p
protein.
Length = 627
Score = 35.1 bits (77), Expect = 0.100
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YC+ C GG + CC CP V+
Sbjct: 37 YCKVCSDGGDLLCCDSCPSVY 57
>AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.
Length = 1518
Score = 35.1 bits (77), Expect = 0.100
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YC+ C GG + CC CP V+
Sbjct: 40 YCKVCSDGGDLLCCDSCPSVY 60
>AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA
protein.
Length = 892
Score = 35.1 bits (77), Expect = 0.100
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YC+ C GG + CC CP V+
Sbjct: 37 YCKVCSDGGDLLCCDSCPSVY 57
>AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protein
protein.
Length = 1982
Score = 33.1 bits (72), Expect = 0.40
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
+CR C GG++ CC CP +
Sbjct: 439 FCRVCKDGGELLCCDSCPSAY 459
Score = 31.5 bits (68), Expect = 1.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YC C QGG++ C CP +
Sbjct: 379 YCEVCQQGGEIILCDTCPRAY 399
>AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB,
isoform B protein.
Length = 1983
Score = 33.1 bits (72), Expect = 0.40
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
+CR C GG++ CC CP +
Sbjct: 440 FCRVCKDGGELLCCDSCPSAY 460
Score = 31.5 bits (68), Expect = 1.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YC C QGG++ C CP +
Sbjct: 380 YCEVCQQGGEIILCDTCPRAY 400
>AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA,
isoform A protein.
Length = 1982
Score = 33.1 bits (72), Expect = 0.40
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
+CR C GG++ CC CP +
Sbjct: 439 FCRVCKDGGELLCCDSCPSAY 459
Score = 31.5 bits (68), Expect = 1.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YC C QGG++ C CP +
Sbjct: 379 YCEVCQQGGEIILCDTCPRAY 399
>AY118843-1|AAM50703.1| 330|Drosophila melanogaster GM13395p
protein.
Length = 330
Score = 31.9 bits (69), Expect = 0.93
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 101 MSEIIKSEGAC----PAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTNLRVS 268
+ E+++++ C P +K + +EN + P DED D+L +E++ +TN
Sbjct: 148 IDELLRNDRVCDIILPRIQKRSILEENNEIEPKVSVLDEDLDDELPSDEEKADETNRPKE 207
Query: 269 NSS 277
NS+
Sbjct: 208 NST 210
>AF210315-1|AAF19646.1| 1133|Drosophila melanogaster bonus protein.
Length = 1133
Score = 31.9 bits (69), Expect = 0.93
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
+C C GG++ CC CP VF
Sbjct: 899 WCAVCLDGGELMCCDKCPKVF 919
>AE014297-2826|AAF55786.2| 1133|Drosophila melanogaster CG5206-PA
protein.
Length = 1133
Score = 31.9 bits (69), Expect = 0.93
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
+C C GG++ CC CP VF
Sbjct: 899 WCAVCLDGGELMCCDKCPKVF 919
>AE013599-807|AAF58976.3| 330|Drosophila melanogaster CG30342-PA
protein.
Length = 330
Score = 31.9 bits (69), Expect = 0.93
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 101 MSEIIKSEGAC----PAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTNLRVS 268
+ E+++++ C P +K + +EN + P DED D+L +E++ +TN
Sbjct: 148 IDELLRNDRVCDIILPRIQKRSILEENNEIEPKVSVLDEDLDDELPSDEEKADETNRPKE 207
Query: 269 NSS 277
NS+
Sbjct: 208 NST 210
>BT015206-1|AAT94435.1| 932|Drosophila melanogaster RE62451p
protein.
Length = 932
Score = 31.5 bits (68), Expect = 1.2
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = +2
Query: 23 VLLQTLSKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTD 202
+LLQ+L+K K + LG ++KS P P K D+ + P LP +
Sbjct: 108 LLLQSLAKEKV-------VQQALGKNAELLLKSPVKRPPPAKKNDEDDLFKLPELPAASV 160
Query: 203 EDFQDDLNEE------EKEYIKTNLRVS-NSSLKSCE---NYFRNI 310
+D QD+ ++ + + ++ R S NSSL++ + +FRN+
Sbjct: 161 QDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNL 206
>AY069054-1|AAL39199.1| 878|Drosophila melanogaster GH06635p
protein.
Length = 878
Score = 31.5 bits (68), Expect = 1.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YC C +GG + CC CP F
Sbjct: 55 YCDACEEGGNLLCCDRCPSSF 75
>AF233659-1|AAF42939.1| 1530|Drosophila melanogaster RECQ4 protein.
Length = 1530
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 113 IKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYI 247
+K+E A +KP +S + + P P+P ED + LN E+ +Y+
Sbjct: 459 VKAEKKPKAEKKPRNSKKAIAVEPAPDPE-EDERQPLNPEDLKYV 502
>AF162795-1|AAD51936.1| 725|Drosophila melanogaster mutant
nucleotide excision repairprotein mus201 protein.
Length = 725
Score = 31.5 bits (68), Expect = 1.2
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = +2
Query: 23 VLLQTLSKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTD 202
+LLQ+L+K K + LG ++KS P P K D+ + P LP +
Sbjct: 108 LLLQSLAKEKV-------VQQALGKNAELLLKSPVKRPPPAKKNDEDDLFKLPELPAASV 160
Query: 203 EDFQDDLNEE------EKEYIKTNLRVS-NSSLKSCE---NYFRNI 310
+D QD+ ++ + + ++ R S NSSL++ + +FRN+
Sbjct: 161 QDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNL 206
>AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide
excision repair proteinMUS201 protein.
Length = 1236
Score = 31.5 bits (68), Expect = 1.2
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = +2
Query: 23 VLLQTLSKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTD 202
+LLQ+L+K K + LG ++KS P P K D+ + P LP +
Sbjct: 108 LLLQSLAKEKV-------VQQALGKNAELLLKSPVKRPPPAKKNDEDDLFKLPELPAASV 160
Query: 203 EDFQDDLNEE------EKEYIKTNLRVS-NSSLKSCE---NYFRNI 310
+D QD+ ++ + + ++ R S NSSL++ + +FRN+
Sbjct: 161 QDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNL 206
>AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair
endonuclease protein.
Length = 1236
Score = 31.5 bits (68), Expect = 1.2
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = +2
Query: 23 VLLQTLSKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTD 202
+LLQ+L+K K + LG ++KS P P K D+ + P LP +
Sbjct: 108 LLLQSLAKEKV-------VQQALGKNAELLLKSPVKRPPPAKKNDEDDLFKLPELPAASV 160
Query: 203 EDFQDDLNEE------EKEYIKTNLRVS-NSSLKSCE---NYFRNI 310
+D QD+ ++ + + ++ R S NSSL++ + +FRN+
Sbjct: 161 QDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNL 206
>AE014298-874|AAF46150.2| 878|Drosophila melanogaster CG3815-PA
protein.
Length = 878
Score = 31.5 bits (68), Expect = 1.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVF 574
YC C +GG + CC CP F
Sbjct: 55 YCDACEEGGNLLCCDRCPSSF 75
>AE014296-1383|AAF50477.1| 1579|Drosophila melanogaster CG7487-PA
protein.
Length = 1579
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 113 IKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYI 247
+K+E A +KP +S + + P P+P ED + LN E+ +Y+
Sbjct: 508 VKAEKKPKAEKKPRNSKKAIAVEPAPDPE-EDERQPLNPEDLKYV 551
>AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-PC,
isoform C protein.
Length = 1236
Score = 31.5 bits (68), Expect = 1.2
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = +2
Query: 23 VLLQTLSKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTD 202
+LLQ+L+K K + LG ++KS P P K D+ + P LP +
Sbjct: 108 LLLQSLAKEKV-------VQQALGKNAELLLKSPVKRPPPAKKNDEDDLFKLPELPAASV 160
Query: 203 EDFQDDLNEE------EKEYIKTNLRVS-NSSLKSCE---NYFRNI 310
+D QD+ ++ + + ++ R S NSSL++ + +FRN+
Sbjct: 161 QDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNL 206
>AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-PB,
isoform B protein.
Length = 1236
Score = 31.5 bits (68), Expect = 1.2
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = +2
Query: 23 VLLQTLSKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTD 202
+LLQ+L+K K + LG ++KS P P K D+ + P LP +
Sbjct: 108 LLLQSLAKEKV-------VQQALGKNAELLLKSPVKRPPPAKKNDEDDLFKLPELPAASV 160
Query: 203 EDFQDDLNEE------EKEYIKTNLRVS-NSSLKSCE---NYFRNI 310
+D QD+ ++ + + ++ R S NSSL++ + +FRN+
Sbjct: 161 QDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNL 206
>AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-PA,
isoform A protein.
Length = 1257
Score = 31.5 bits (68), Expect = 1.2
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = +2
Query: 23 VLLQTLSKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTD 202
+LLQ+L+K K + LG ++KS P P K D+ + P LP +
Sbjct: 129 LLLQSLAKEKV-------VQQALGKNAELLLKSPVKRPPPAKKNDEDDLFKLPELPAASV 181
Query: 203 EDFQDDLNEE------EKEYIKTNLRVS-NSSLKSCE---NYFRNI 310
+D QD+ ++ + + ++ R S NSSL++ + +FRN+
Sbjct: 182 QDNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNL 227
>AY060435-1|AAL25474.1| 308|Drosophila melanogaster LD46228p
protein.
Length = 308
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 360 HCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC 458
HCT CDR S + VKIH + C C
Sbjct: 185 HCTVCDRRFRQLSTLTNHVKIHTGEKPYKCNVC 217
>AE014298-764|AAF46054.1| 623|Drosophila melanogaster CG15776-PA
protein.
Length = 623
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 134 PAPEKPASSDENVQF---PPLPEPTDEDFQDDLNEEEKEYIKTNLRVS 268
P PE A DE+ F PPL + +E+ +++ EEE+E K +S
Sbjct: 380 PPPEHFAELDEDRGFIPPPPLEQEPEEEVEEEEEEEEEELTKETDEIS 427
>AE014296-3536|AAF51720.1| 308|Drosophila melanogaster CG5683-PC,
isoform C protein.
Length = 308
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 360 HCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC 458
HCT CDR S + VKIH + C C
Sbjct: 185 HCTVCDRRFRQLSTLTNHVKIHTGEKPYKCNVC 217
>AE014296-3535|AAF51722.1| 308|Drosophila melanogaster CG5683-PB,
isoform B protein.
Length = 308
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 360 HCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC 458
HCT CDR S + VKIH + C C
Sbjct: 185 HCTVCDRRFRQLSTLTNHVKIHTGEKPYKCNVC 217
>AE014296-3534|AAF51721.1| 308|Drosophila melanogaster CG5683-PA,
isoform A protein.
Length = 308
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 360 HCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC 458
HCT CDR S + VKIH + C C
Sbjct: 185 HCTVCDRRFRQLSTLTNHVKIHTGEKPYKCNVC 217
>AY119160-1|AAM51020.1| 152|Drosophila melanogaster RH09920p
protein.
Length = 152
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 438 TLVCQTCHIFYNSGEFEKGDD 500
TL C TCH+ + + +FEK D
Sbjct: 83 TLTCSTCHLIFKTSDFEKLPD 103
>AY071001-1|AAL48623.1| 152|Drosophila melanogaster RE08888p
protein.
Length = 152
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 438 TLVCQTCHIFYNSGEFEKGDD 500
TL C TCH+ + + +FEK D
Sbjct: 83 TLTCSTCHLIFKTSDFEKLPD 103
>AY061522-1|AAL29070.1| 447|Drosophila melanogaster LD47721p
protein.
Length = 447
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 363 CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC 458
C CDRH S + ++H R CQ C
Sbjct: 352 CMYCDRHFYDRSERVRHERVHTNTRPYACQEC 383
>AE014297-1334|AAF54663.2| 447|Drosophila melanogaster CG14710-PA
protein.
Length = 447
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 363 CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC 458
C CDRH S + ++H R CQ C
Sbjct: 352 CMYCDRHFYDRSERVRHERVHTNTRPYACQEC 383
>AE014296-824|AAF47883.1| 158|Drosophila melanogaster CG1319-PA
protein.
Length = 158
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 438 TLVCQTCHIFYNSGEFEKGDD 500
TL C TCH+ + + +FEK D
Sbjct: 89 TLTCSTCHLIFKTSDFEKLPD 109
>BT025221-1|ABF17912.1| 1427|Drosophila melanogaster FI01019p protein.
Length = 1427
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 509 LYCRWCGQGGQVFCCSDCP 565
L+C C +GG++ CC CP
Sbjct: 1000 LWCYICVKGGELVCCETCP 1018
>AY118769-1|AAM50629.1| 414|Drosophila melanogaster GH11066p
protein.
Length = 414
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 149 PASSDENVQFPPLPEP---TDEDFQDDLNEEEKEYIKTNLRVSNSSLKSCENY 298
P ++DENV +P P E F+D L + K+Y KT + + + + ENY
Sbjct: 3 PQTNDENVCEREVPIPGWVKPEVFEDLLKDNVKDYKKTKALRAKAGVAAGENY 55
>AY118404-1|AAM48433.1| 1016|Drosophila melanogaster RE61305p
protein.
Length = 1016
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 509 LYCRWCGQGGQVFCCSDCP 565
L+C C +GG++ CC CP
Sbjct: 589 LWCYICVKGGELVCCETCP 607
>AE014297-4201|AAF56762.2| 1427|Drosophila melanogaster CG4976-PA
protein.
Length = 1427
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 509 LYCRWCGQGGQVFCCSDCP 565
L+C C +GG++ CC CP
Sbjct: 1000 LWCYICVKGGELVCCETCP 1018
>AE014297-3783|AAF56455.2| 414|Drosophila melanogaster CG10560-PA
protein.
Length = 414
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 149 PASSDENVQFPPLPEP---TDEDFQDDLNEEEKEYIKTNLRVSNSSLKSCENY 298
P ++DENV +P P E F+D L + K+Y KT + + + + ENY
Sbjct: 3 PQTNDENVCEREVPIPGWVKPEVFEDLLKDNVKDYKKTKALRAKAGVAAGENY 55
>BT023142-1|AAY55558.1| 704|Drosophila melanogaster IP08936p
protein.
Length = 704
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVFLCE 583
+CR C + G + CC CP V+ E
Sbjct: 341 HCRVCHRLGDLLCCETCPAVYHLE 364
>BT022131-1|AAY51526.1| 704|Drosophila melanogaster IP08836p
protein.
Length = 704
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVFLCE 583
+CR C + G + CC CP V+ E
Sbjct: 341 HCRVCHRLGDLLCCETCPAVYHLE 364
>AF417921-1|AAL16644.1| 2669|Drosophila melanogaster nucleosome
remodeling factor largesubunit NURF301 protein.
Length = 2669
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVFLCE 583
+CR C + G + CC CP V+ E
Sbjct: 341 HCRVCHRLGDLLCCETCPAVYHLE 364
>AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant
protein.
Length = 1257
Score = 29.5 bits (63), Expect = 5.0
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = +2
Query: 23 VLLQTLSKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTD 202
+LLQ+L+K K + LG ++KS P P K D+ + P LP +
Sbjct: 129 LLLQSLAKEKV-------VQQALGKNAELLLKSPVKRPPPAKKNDEDDLFKLPELPAASV 181
Query: 203 EDFQDDLNEE------EKEYIKTNLRVS-NSSLKSCE---NYFRNI 310
++ QD+ ++ + + ++ R S NSSL++ + +FRN+
Sbjct: 182 QNNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNL 227
>AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein.
Length = 1236
Score = 29.5 bits (63), Expect = 5.0
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = +2
Query: 23 VLLQTLSKYKHFYILLMRIPNDLGTTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTD 202
+LLQ+L+K K + LG ++KS P P K D+ + P LP +
Sbjct: 108 LLLQSLAKEKV-------VQQALGKNAELLLKSPVKRPPPAKKNDEDDLFKLPELPAASV 160
Query: 203 EDFQDDLNEE------EKEYIKTNLRVS-NSSLKSCE---NYFRNI 310
++ QD+ ++ + + ++ R S NSSL++ + +FRN+
Sbjct: 161 QNNQDESEQDTSASASDSSFDESTARHSYNSSLQAIDVKSQHFRNL 206
>AE014296-62|AAS64922.1| 2159|Drosophila melanogaster CG32346-PC,
isoform C protein.
Length = 2159
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVFLCE 583
+CR C + G + CC CP V+ E
Sbjct: 341 HCRVCHRLGDLLCCETCPAVYHLE 364
>AE014296-61|AAN11431.1| 2669|Drosophila melanogaster CG32346-PA,
isoform A protein.
Length = 2669
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVFLCE 583
+CR C + G + CC CP V+ E
Sbjct: 341 HCRVCHRLGDLLCCETCPAVYHLE 364
>AE014296-60|AAF47361.2| 2649|Drosophila melanogaster CG32346-PB,
isoform B protein.
Length = 2649
Score = 29.5 bits (63), Expect = 5.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 512 YCRWCGQGGQVFCCSDCPHVFLCE 583
+CR C + G + CC CP V+ E
Sbjct: 341 HCRVCHRLGDLLCCETCPAVYHLE 364
>BT022160-1|AAY51554.1| 520|Drosophila melanogaster IP01388p
protein.
Length = 520
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 330 DLNTITSQRLHCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCH 461
D++ I ++ C C++ S ++ ++ H R VC CH
Sbjct: 122 DVDLIFNEEGSCPLCNKTFSRKSSLMTHIRNHSAERKFVCTYCH 165
>AY069577-1|AAL39722.1| 714|Drosophila melanogaster LD31554p
protein.
Length = 714
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 363 CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCH-IFYNSGEFEK 491
C CD+ +SS LS +K+H R C C F SG+ ++
Sbjct: 610 CQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKR 653
>AE014298-690|AAF45994.2| 543|Drosophila melanogaster CG32772-PA
protein.
Length = 543
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +3
Query: 330 DLNTITSQRLHCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCH 461
D++ I ++ C C++ S ++ ++ H R VC CH
Sbjct: 122 DVDLIFNEEGSCPLCNKTFSRKSSLMTHIRNHSAERKFVCTYCH 165
>AE014134-680|AAF51059.1| 714|Drosophila melanogaster CG3407-PA
protein.
Length = 714
Score = 29.1 bits (62), Expect = 6.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 363 CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCH-IFYNSGEFEK 491
C CD+ +SS LS +K+H R C C F SG+ ++
Sbjct: 610 CQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKR 653
>U18130-1|AAC46512.1| 1047|Drosophila melanogaster masquerade
protein.
Length = 1047
Score = 28.7 bits (61), Expect = 8.7
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 4/81 (4%)
Frame = +2
Query: 95 TTMSEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTNLRVSNS 274
TT E + +CP P K E +++ ++D EEE+ + L+
Sbjct: 278 TTTPEPARINNSCPKPTKHKKHPTTTTTEAAEEEEEQETEED-GEEEEPPLSNKLKSGQG 336
Query: 275 S---LKSCENYFRN-IKIMFC 325
LK CE N I +FC
Sbjct: 337 QGQVLKECEGECMNGIFAIFC 357
>AY094874-1|AAM11227.1| 147|Drosophila melanogaster RE41137p
protein.
Length = 147
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 513 TVDGVAKEDKYSVVLTVLMFFCAKCIKRNFGQSKILEIKCVDDW--KCFKCNPECLKTPA 686
T DG +K+ + V+ + FC R I + C+DDW + C P CL+
Sbjct: 81 TYDGSSKKARECVIC--MAEFCVNEAVRYLPCMHIYHVNCIDDWLLRSLTC-PSCLEPVD 137
Query: 687 CCML 698
+L
Sbjct: 138 AALL 141
>AE014296-1126|AAN12084.1| 1943|Drosophila melanogaster CG32397-PA
protein.
Length = 1943
Score = 28.7 bits (61), Expect = 8.7
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 95 TTMSEIIKSEGACPAPEKPASSDENVQFPPLPEP-TDEDFQDDLNEEEKEYIKTNLRVSN 271
T +IIK + E+ +E PP P P T+E Q+D + +E + NL VS
Sbjct: 883 TKSQDIIKEKEQVSRKEEAEDDEEEEPLPPPPPPLTEESQQEDTVADVEE--EDNLSVSI 940
Query: 272 S 274
S
Sbjct: 941 S 941
>AE014135-64|AAN06527.1| 147|Drosophila melanogaster CG32850-PA
protein.
Length = 147
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 513 TVDGVAKEDKYSVVLTVLMFFCAKCIKRNFGQSKILEIKCVDDW--KCFKCNPECLKTPA 686
T DG +K+ + V+ + FC R I + C+DDW + C P CL+
Sbjct: 81 TYDGSSKKARECVIC--MAEFCVNEAVRYLPCMHIYHVNCIDDWLLRSLTC-PSCLEPVD 137
Query: 687 CCML 698
+L
Sbjct: 138 AALL 141
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,391,561
Number of Sequences: 53049
Number of extensions: 623442
Number of successful extensions: 3392
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 2973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3369
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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