Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0351
         (508 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    30   5.3  

>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
 Frame = -1

Query: 499 HSYCCNFIKKTCIFYFVSCFIYILSVV*FTSVCNYSNMKKKTNTYKNSLQHLRYYVYSIL 320
           H+Y C  I   C++ ++  +IY         +C + NM      Y  +   +  Y+Y++ 
Sbjct: 84  HTYMCAHIHM-CVYTYIYVYIYT-----HIHICVHINMYVSIYVYIYTCIQIYIYMYTLY 137

Query: 319 FSTYSVNSMYSNIL*FYIYT*II-SCI-*HMNYSSNIHL 209
             TY+    Y +I    I+T II  C+  H+    NI++
Sbjct: 138 VCTYTYMCTYIHIC---IHTSIIYVCVYIHIQCPLNIYI 173


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,354,309
Number of Sequences: 237096
Number of extensions: 1021370
Number of successful extensions: 2474
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2474
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)