Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0351
(508 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 24 0.79
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.8
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.4
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.4
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.4
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 22 3.2
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 4.2
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 21 7.3
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 7.3
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.7
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.2 bits (50), Expect = 0.79
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -1
Query: 403 CNYSNMKKKTNTYKNSLQHLRY 338
CNYSN N YK ++ Y
Sbjct: 311 CNYSNNYYNNNNYKKLYYNINY 332
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -1
Query: 397 YSNMKKKTNTYKNSLQHLRYYVYSILFSTYSVN 299
YSN N Y N+ + Y L+ Y +N
Sbjct: 91 YSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIIN 123
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -1
Query: 397 YSNMKKKTNTYKNSLQHLRYYVYSILFSTYSVN 299
YSN N Y N+ + Y L+ Y +N
Sbjct: 91 YSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIIN 123
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 397 YSNMKKKTNTYKNSLQHLRYY 335
YSN N Y + + L+YY
Sbjct: 91 YSNYNNYNNNYNTNYKKLQYY 111
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 397 YSNMKKKTNTYKNSLQHLRYY 335
YSN N Y + + L+YY
Sbjct: 91 YSNYNNYNNNYNTNYKKLQYY 111
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 397 YSNMKKKTNTYKNSLQHLRYY 335
YSN N Y + + L+YY
Sbjct: 91 YSNYNNYNNNYNTNYKKLQYY 111
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 397 YSNMKKKTNTYKNSLQHLRYY 335
YSN N Y + + L+YY
Sbjct: 91 YSNYNNYNNNYNTNYKKLQYY 111
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 397 YSNMKKKTNTYKNSLQHLRYY 335
YSN N Y + + L+YY
Sbjct: 91 YSNYNNYNNNYNTNYKKLQYY 111
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 397 YSNMKKKTNTYKNSLQHLRYY 335
YSN N Y + + L+YY
Sbjct: 91 YSNYNNYNNNYNTNYKKLQYY 111
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -1
Query: 397 YSNMKKKTNTYKNSLQHLRYY 335
YSN N Y + + L+YY
Sbjct: 91 YSNYNNYNNNYNTNYKKLQYY 111
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -1
Query: 400 NYSNMKKKTNTYKNSLQHLRYYV 332
NY+N N Y N+ + L Y +
Sbjct: 333 NYNNYNNYNNNYNNNYKKLYYNI 355
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 22.2 bits (45), Expect = 3.2
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 400 NYSNMKKKTNTYKNSL 353
N MKK TYKNS+
Sbjct: 59 NAEGMKKYCETYKNSI 74
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 4.2
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -1
Query: 400 NYSNMKKKTNTYKNSLQHLRYYV 332
NYSN N Y N + L Y +
Sbjct: 90 NYSNYNNYNNNYNNYNKKLYYNI 112
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 129 VYFKLIIHISFLSNNVISNYF 67
+ +II + F NVI +YF
Sbjct: 18 IQIPVIIQLPFCGPNVIDHYF 38
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/27 (25%), Positives = 14/27 (51%)
Frame = -1
Query: 472 KTCIFYFVSCFIYILSVV*FTSVCNYS 392
K Y V CF+++ + + + NY+
Sbjct: 302 KAIDIYLVMCFVFVFAALLEYAAVNYT 328
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 9.7
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 455 FCVVFYIYFVCSVI 414
FC++F ++F C I
Sbjct: 453 FCLLFLMFFECIAI 466
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 9.7
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 455 FCVVFYIYFVCSVI 414
FC++F ++F C I
Sbjct: 506 FCLLFLMFFECIAI 519
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,345
Number of Sequences: 438
Number of extensions: 2686
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -