Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0351
         (508 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60570.1 68418.m07594 kelch repeat-containing F-box family pr...    27   5.5  
At5g38970.3 68418.m04714 cytochrome P450, putative similar to Cy...    27   7.3  
At5g38970.2 68418.m04712 cytochrome P450, putative similar to Cy...    27   7.3  
At5g38970.1 68418.m04713 cytochrome P450, putative similar to Cy...    27   7.3  
At3g30180.1 68416.m03806 cytochrome P450, putative similar to cy...    27   9.6  
At1g71390.1 68414.m08243 disease resistance family protein / LRR...    27   9.6  

>At5g60570.1 68418.m07594 kelch repeat-containing F-box family
           protein contains Pfam:PF01344 Kelch motif, Pfam:PF00646
           F-box domain
          Length = 393

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 33  STNIVRTYDKNKNNW 77
           STN+V+ YDK KN W
Sbjct: 299 STNMVKKYDKVKNKW 313


>At5g38970.3 68418.m04714 cytochrome P450, putative similar to
           Cytochrome P450 85 (SP:Q43147) {Lycopersicon
           esculentum};
          Length = 419

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -1

Query: 415 FTSVCNYSNMKKKTNTYKNSLQHLRYYVYSILFSTYSVNSMYSNIL*FYIY 263
           FT +  Y  MKK+ N Y  + + +R  V +IL+S Y   S  S +   Y++
Sbjct: 245 FTDMLGYL-MKKEGNRYPLTDEEIRDQVVTILYSGYETVSTTSMMALKYLH 294


>At5g38970.2 68418.m04712 cytochrome P450, putative similar to
           Cytochrome P450 85 (SP:Q43147) {Lycopersicon
           esculentum};
          Length = 384

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -1

Query: 415 FTSVCNYSNMKKKTNTYKNSLQHLRYYVYSILFSTYSVNSMYSNIL*FYIY 263
           FT +  Y  MKK+ N Y  + + +R  V +IL+S Y   S  S +   Y++
Sbjct: 164 FTDMLGYL-MKKEGNRYPLTDEEIRDQVVTILYSGYETVSTTSMMALKYLH 213


>At5g38970.1 68418.m04713 cytochrome P450, putative similar to
           Cytochrome P450 85 (SP:Q43147) {Lycopersicon
           esculentum};
          Length = 465

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -1

Query: 415 FTSVCNYSNMKKKTNTYKNSLQHLRYYVYSILFSTYSVNSMYSNIL*FYIY 263
           FT +  Y  MKK+ N Y  + + +R  V +IL+S Y   S  S +   Y++
Sbjct: 245 FTDMLGYL-MKKEGNRYPLTDEEIRDQVVTILYSGYETVSTTSMMALKYLH 294


>At3g30180.1 68416.m03806 cytochrome P450, putative similar to
           cytochrome P450 homolog (SP:U54770)  [Lycopersicon
           esculentum]
          Length = 465

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -1

Query: 415 FTSVCNYSNMKKKTNTYKNSLQHLRYYVYSILFSTYSVNSMYSNIL*FYIY 263
           FT +  Y  MKK+ N Y  + + +R  V +IL+S Y   S  S +   Y++
Sbjct: 245 FTDMLGYL-MKKEDNRYLLTDKEIRDQVVTILYSGYETVSTTSMMALKYLH 294


>At1g71390.1 68414.m08243 disease resistance family protein / LRR
           family protein contains leucine rich-repeat domains
           Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5B
           [Lycopersicon esculentum] gi|3894391|gb|AAC78595
          Length = 784

 Score = 26.6 bits (56), Expect = 9.6
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 156 LTFSH*CGWVYFKLIIHISFLSNNVISNYFCFC 58
           +T SH C W Y  + I+ SFL +++ S    FC
Sbjct: 1   MTRSH-CYWFYCIITIYFSFLIHSLASPSLHFC 32


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,855,349
Number of Sequences: 28952
Number of extensions: 151211
Number of successful extensions: 303
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 303
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 908059136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)