Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0350
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125109-1|AAI25110.1|  782|Homo sapiens Vac14 homolog (S. cerev...    86   1e-16
BC125108-1|AAI25109.1|  782|Homo sapiens Vac14 homolog (S. cerev...    86   1e-16

>BC125109-1|AAI25110.1|  782|Homo sapiens Vac14 homolog (S.
           cerevisiae) protein.
          Length = 782

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 42/86 (48%), Positives = 58/86 (67%)
 Frame = +1

Query: 250 SFVRGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGA 429
           + VR L DKLYEKRKVA +EIEK+V++F    NT QIK +I+ L Q+   S +P+ + G 
Sbjct: 13  NIVRALNDKLYEKRKVAALEIEKLVREFVAQNNTVQIKHVIQTLSQEFALSQHPHSRKGG 72

Query: 430 LMGLSTVAVGLGKASVDYLPELTNPI 507
           L+GL+  ++ LGK S  YL EL  P+
Sbjct: 73  LIGLAACSIALGKDSGLYLKELIEPV 98



 Score = 67.7 bits (158), Expect = 4e-11
 Identities = 32/78 (41%), Positives = 47/78 (60%)
 Frame = +3

Query: 420 KRSTYGSVYCSSGAWQGISRLLTRINKSNRACFSESESRVRYQAAEALFNVLKIVRGASL 599
           K    G   CS    +     L  + +    CF++++SR+RY A EAL+N++K+ RGA L
Sbjct: 70  KGGLIGLAACSIALGKDSGLYLKELIEPVLTCFNDADSRLRYYACEALYNIVKVARGAVL 129

Query: 600 SQFPVIFDALAKLAADPE 653
             F V+FD L+KLAADP+
Sbjct: 130 PHFNVLFDGLSKLAADPD 147



 Score = 32.7 bits (71), Expect = 1.4
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +2

Query: 659 VKHAAELLDRLLKDIVTEN 715
           VK  +ELLDRLLKDIVTE+
Sbjct: 150 VKSGSELLDRLLKDIVTES 168


>BC125108-1|AAI25109.1|  782|Homo sapiens Vac14 homolog (S.
           cerevisiae) protein.
          Length = 782

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 42/86 (48%), Positives = 58/86 (67%)
 Frame = +1

Query: 250 SFVRGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGA 429
           + VR L DKLYEKRKVA +EIEK+V++F    NT QIK +I+ L Q+   S +P+ + G 
Sbjct: 13  NIVRALNDKLYEKRKVAALEIEKLVREFVAQNNTVQIKHVIQTLSQEFALSQHPHSRKGG 72

Query: 430 LMGLSTVAVGLGKASVDYLPELTNPI 507
           L+GL+  ++ LGK S  YL EL  P+
Sbjct: 73  LIGLAACSIALGKDSGLYLKELIEPV 98



 Score = 67.7 bits (158), Expect = 4e-11
 Identities = 32/78 (41%), Positives = 47/78 (60%)
 Frame = +3

Query: 420 KRSTYGSVYCSSGAWQGISRLLTRINKSNRACFSESESRVRYQAAEALFNVLKIVRGASL 599
           K    G   CS    +     L  + +    CF++++SR+RY A EAL+N++K+ RGA L
Sbjct: 70  KGGLIGLAACSIALGKDSGLYLKELIEPVLTCFNDADSRLRYYACEALYNIVKVARGAVL 129

Query: 600 SQFPVIFDALAKLAADPE 653
             F V+FD L+KLAADP+
Sbjct: 130 PHFNVLFDGLSKLAADPD 147



 Score = 32.7 bits (71), Expect = 1.4
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = +2

Query: 659 VKHAAELLDRLLKDIVTEN 715
           VK  +ELLDRLLKDIVTE+
Sbjct: 150 VKSGSELLDRLLKDIVTES 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,870,886
Number of Sequences: 237096
Number of extensions: 1807211
Number of successful extensions: 10635
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10635
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)