Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0350
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical pr...    68   8e-12
AF039720-8|AAB96701.2|   85|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U55370-6|AAA97997.1|  150|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z75712-4|CAB00043.1|  694|Caenorhabditis elegans Hypothetical
           protein K04G2.6 protein.
          Length = 694

 Score = 67.7 bits (158), Expect = 8e-12
 Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 VRGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALM 435
           +R + DK YE+RK A +++EK+V+D  +    SQ+ K + VLG +L++S N N + G L+
Sbjct: 14  IRSITDKSYERRKAAALDVEKLVRDLFNNNQLSQLDKCLSVLG-ELINSGNSNQRKGGLI 72

Query: 436 GLSTVAVGLG-KASVDYLPELTNPI 507
           G++  ++ LG K +  Y  +L  PI
Sbjct: 73  GMAAASIALGNKNAPPYTAKLVEPI 97



 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 18/48 (37%), Positives = 33/48 (68%)
 Frame = +3

Query: 513 CFSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKLAADPER 656
           CF +++ ++RY A E+L+N+ KI + + L+ F  IFD L ++ AD ++
Sbjct: 100 CFHDADLQIRYYACESLYNIAKICKTSVLAHFEDIFDVLWRVTADSDQ 147


>AF039720-8|AAB96701.2|   85|Caenorhabditis elegans Hypothetical
           protein F33D11.8 protein.
          Length = 85

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -3

Query: 374 LINFFIWLVFFASLKSFTIFSISTPATFLFSYN 276
           ++ FF++L+FFA L SFT  +I   + FL SY+
Sbjct: 1   MVKFFVFLLFFAFLCSFT-SAIPLRSLFLRSYD 32


>Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical
           protein F08H9.12 protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = +2

Query: 14  FVFKSLLNSYFHFGFKIINYVIIYSNV-SI*SYKKNMVL*F*FLLI-SWIAH 163
           F +K +L SYF F   I+ ++++Y  V    +YK ++++ F  + + S+I H
Sbjct: 55  FFYKMVLFSYFLFSTFILYFIVLYLIVRDSQAYKTSVIISFSLIFVESYIFH 106


>U55370-6|AAA97997.1|  150|Caenorhabditis elegans Hypothetical
           protein K03B4.2 protein.
          Length = 150

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +1

Query: 337 DAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMGLSTVAVGLGKASVDYLPELTNPIGLA 516
           D+ + + +KK      +D +S+T PN+  G+  G  T+A      S D + +     G +
Sbjct: 34  DSSSLTSMKKAAAAAAKDQVSTTPPNLVIGSNGGAGTIATVPRSKSQDEIVKKQKTAGQS 93

Query: 517 SA 522
            A
Sbjct: 94  KA 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,456,050
Number of Sequences: 27780
Number of extensions: 296095
Number of successful extensions: 780
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)