Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0350
(739 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g01690.2 68415.m00097 expressed protein 69 3e-12
At2g01690.1 68415.m00096 expressed protein 69 3e-12
At1g79610.1 68414.m09282 sodium proton exchanger, putative (NHX6... 30 1.8
At2g37860.2 68415.m04648 expressed protein 29 3.2
At2g37860.1 68415.m04647 expressed protein 29 3.2
At1g54370.1 68414.m06199 sodium proton exchanger, putative (NHX5... 29 4.3
At5g13760.1 68418.m01604 expressed protein similar to unknown pr... 28 5.6
At2g15440.1 68415.m01766 expressed protein contains Pfam profile... 28 5.6
At5g45790.1 68418.m05631 expressed protein ; expression support... 27 9.8
At4g16563.1 68417.m02506 aspartyl protease family protein contai... 27 9.8
At3g14460.1 68416.m01832 disease resistance protein (NBS-LRR cla... 27 9.8
>At2g01690.2 68415.m00097 expressed protein
Length = 744
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 259 RGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMG 438
R L DKLYEKRK A +E+E +VK+ + + +I K+I++L ++ S N + G L+G
Sbjct: 14 RNLSDKLYEKRKNAALELENIVKNLTSSGDHDKISKVIEMLIKEFAKSPQANHRKGGLIG 73
Query: 439 LSTVAVGLGKASVDYLPELTNPI 507
L+ V VGL + YL ++ P+
Sbjct: 74 LAAVTVGLSTEAAQYLEQIVPPV 96
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +3
Query: 516 FSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKLAADPE 653
FS+ +SRVRY A EAL+N+ K+VRG + F IFDAL KL+AD +
Sbjct: 100 FSDQDSRVRYYACEALYNIAKVVRGDFIIFFNKIFDALCKLSADSD 145
>At2g01690.1 68415.m00096 expressed protein
Length = 743
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/83 (38%), Positives = 51/83 (61%)
Frame = +1
Query: 259 RGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVLGQDLMSSTNPNMKNGALMG 438
R L DKLYEKRK A +E+E +VK+ + + +I K+I++L ++ S N + G L+G
Sbjct: 14 RNLSDKLYEKRKNAALELENIVKNLTSSGDHDKISKVIEMLIKEFAKSPQANHRKGGLIG 73
Query: 439 LSTVAVGLGKASVDYLPELTNPI 507
L+ V VGL + YL ++ P+
Sbjct: 74 LAAVTVGLSTEAAQYLEQIVPPV 96
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +3
Query: 516 FSESESRVRYQAAEALFNVLKIVRGASLSQFPVIFDALAKLAADPE 653
FS+ +SRVRY A EAL+N+ K+VRG + F IFDAL KL+AD +
Sbjct: 100 FSDQDSRVRYYACEALYNIAKVVRGDFIIFFNKIFDALCKLSADSD 145
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 653 AQVKHAAELLDRLLKDIVTEN 715
A V+ AA LLDRL+KDIVTE+
Sbjct: 146 ANVQSAAHLLDRLVKDIVTES 166
>At1g79610.1 68414.m09282 sodium proton exchanger, putative (NHX6)
identical to Na+/H+ exchanger 6 [Arabidopsis thaliana]
gi|19919848|gb|AAM08407 (Plant J. (2002) In press);
contains similarity to Na+/H+ antiporter GI:1655701 from
[Xenopus laevis]; contains non-consensus AT/AC splice
sites; Member of The Monovalent Cation:Proton Antiporter
(CPA1) Family, PMID:11500563
Length = 535
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 584 DNLQHVEQCLSCLVPYTRFALAE 516
DNLQ++E CL L PY + LAE
Sbjct: 253 DNLQNLECCLFVLFPYFSYMLAE 275
>At2g37860.2 68415.m04648 expressed protein
Length = 432
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 548 LVPYTRFALAEASPIGFVNSGK*STDALPSPTATVDRP 435
L PY RF ASP GF+ + +ALPS +RP
Sbjct: 268 LAPYVRFGQPSASP-GFLGRMVFAYNALPSSVFEAERP 304
>At2g37860.1 68415.m04647 expressed protein
Length = 347
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 548 LVPYTRFALAEASPIGFVNSGK*STDALPSPTATVDRP 435
L PY RF ASP GF+ + +ALPS +RP
Sbjct: 268 LAPYVRFGQPSASP-GFLGRMVFAYNALPSSVFEAERP 304
>At1g54370.1 68414.m06199 sodium proton exchanger, putative (NHX5)
contains similarity to Na+/H+ antiporter GI:1655701 from
[Xenopus laevis]; Member of The Monovalent Cation:Proton
Antiporter (CPA1) Family, PMID:11500563; contains
non-consensus AT-AC splice sites at introns 3 and 10
Length = 521
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 587 SDNLQHVEQCLSCLVPYTRFALAE 516
++NLQ++E CL L PY + LAE
Sbjct: 252 TENLQNLECCLFVLFPYFSYMLAE 275
>At5g13760.1 68418.m01604 expressed protein similar to unknown
protein (gb AAF63775.1)
Length = 569
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -3
Query: 386 WPKTLINFFIWLVFFASLKS-FTIFSISTPAT 294
WP +I+F +W F SL S + PAT
Sbjct: 213 WPDFMIHFILWSTFLMSLSSGILLLCFQMPAT 244
>At2g15440.1 68415.m01766 expressed protein contains Pfam profile
PF04669: Protein of unknown function (DUF579)
Length = 329
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -3
Query: 365 FFIWLVFFASLKSFTIFSISTPATFLFSYNLSQSP 261
F +L FF L SF++FS S +T S++LS SP
Sbjct: 36 FIFFLSFFTLLFSFSLFSSSIHST-TSSHSLSSSP 69
>At5g45790.1 68418.m05631 expressed protein ; expression supported
by MPSS
Length = 423
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 247 HSFVRGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLI 372
H F + LC K+ EK KV E E +V++ + ++KKL+
Sbjct: 121 HPFSKNLCCKITEKFKVLIDEEENVVREC-EVDAVKRVKKLL 161
>At4g16563.1 68417.m02506 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 499
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 380 KTLINFFIWLVFFASLKSFTIFSISTPATFLFSYNLSQS 264
KT + FF++ F++ S+STP S++LS S
Sbjct: 2 KTCLIFFLYTTILQYYFHFSVSSLSTPLLLHLSHSLSTS 40
>At3g14460.1 68416.m01832 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1424
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +1
Query: 238 TAEHSFVRGLCDKLYEKRKVAGVEIEKMVKDFNDAKNTSQIKKLIKVL 381
T SF R CD R + G E + + FN + ++ KVL
Sbjct: 518 TRHFSFSRSQCDASVAFRSICGAEFLRTILPFNSPTSLESLQLTEKVL 565
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,273,901
Number of Sequences: 28952
Number of extensions: 264796
Number of successful extensions: 667
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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