Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0348
(666 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 41 2e-04
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 38 0.001
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 37 0.002
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 36 0.005
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 29 0.60
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 28 1.4
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 27 2.4
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo... 26 5.6
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 26 5.6
SPAC22F8.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 7.4
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 25 7.4
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 25 7.4
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 25 7.4
SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 25 9.8
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 40.7 bits (91), Expect = 2e-04
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 29 LIFSFSFIVLLCSTIDFASANKE-LNENNWKEILEGEWMLEFYAPWCPACNALAPVGRSS 205
L FS F C++ + NKE LNE + + M++FYAPWC C ALAP S+
Sbjct: 11 LAFSGGFF---CASAEVPKVNKEGLNELITADKV---LMVKFYAPWCGHCKALAPEYESA 64
Query: 206 LHELPK 223
EL K
Sbjct: 65 ADELEK 70
Score = 32.3 bits (70), Expect = 0.065
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAP 190
++EFYAPWC C LAP
Sbjct: 377 LVEFYAPWCGHCKNLAP 393
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 258 TNSPGLSGRFVVTALPTIFHVKDG-EFRQYKGPRDVESMLTFVENKKWKQTDPI 416
T L + + PT+ K+G + QY GPR ++++ ++ + PI
Sbjct: 81 TEEGDLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTVKPI 134
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +2
Query: 77 FASANKELNENNWKEILE--GEWMLEFYAPWCPACNALAPVGR---SSLHEL 217
F S ELN N+++ ++ G ++ FYAPWC C L P + S+LH L
Sbjct: 29 FGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGYCKKLVPTYQKLASNLHSL 80
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 29 LIFSFSFIVLLCSTIDFASANKELNENNWKEILEGEWMLEFYAPWCPACNALAPV 193
+IF+ +V ++ S N EL EN + +G ++EFYA WC C +LAPV
Sbjct: 9 VIFALFALVFASGVVELQSLN-EL-ENTIRASKKGA-LIEFYATWCGHCKSLAPV 60
Score = 29.9 bits (64), Expect = 0.34
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +2
Query: 95 ELNENNWKEIL---EGEWMLEFYAPWCPACNALAP 190
EL+ N+ +++ + + ++EFYA WC C LAP
Sbjct: 144 ELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAP 178
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 273 LSGRFVVTALPT-IFHVKDG-EFRQYKGPRDVESMLTFVENK 392
++ ++ +T PT I+ DG E QY RDV+S+ FV K
Sbjct: 87 VADKYHITGFPTLIWFPPDGSEPVQYSNARDVDSLTQFVSEK 128
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 35.9 bits (79), Expect = 0.005
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 32 IFSFSFIVLLCSTIDFASANKELNENNWK-EILEGEWMLEFYAPWCPACNALAPV 193
+ S++V + + + L +N+ + E+ +G W +++Y P C AC L P+
Sbjct: 9 VMRISWVVAFITMVQTLVSGVPLTDNDLESEVSKGTWFIKYYLPSCGACKRLGPM 63
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 29.1 bits (62), Expect = 0.60
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 518 YGLPSWGSYLIFAIATIFVGALV 586
YG PSWG YL F+I+ + G L+
Sbjct: 506 YGFPSWGKYL-FSISDLIAGWLM 527
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 27.9 bits (59), Expect = 1.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAP 190
+++F+A WC C A+AP
Sbjct: 22 VVDFFATWCGPCKAIAP 38
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 71 IDFASANKELNENNWKEILEGEWMLEFYAPWCPACNALAPV 193
I F +E+ +N ++I+ +L FYAPW C + V
Sbjct: 5 ITFVEQFQEILQNGKEQII----LLNFYAPWAAPCKQMNQV 41
>SPAC26H5.07c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 505
Score = 25.8 bits (54), Expect = 5.6
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = -1
Query: 465 TQQPRTFAVSQVPSIPGWDRFASTFCSRQRSAWTLHHVDPCTDETRHLSHGK**AVR*QQ 286
T+ R FA+S+ + D F T S + LHH P + H+ HG A Q
Sbjct: 427 TENNRRFAMSEQVA-QDVDEFEMT-SSLSNDSLHLHHERPTSPANPHIIHGS--ADEHQA 482
Query: 285 IFHLDQAS 262
+F +D S
Sbjct: 483 LFAVDDES 490
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 25.8 bits (54), Expect = 5.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAP 190
+++FYA WC C L P
Sbjct: 39 VVDFYADWCGPCKYLKP 55
>SPAC22F8.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 133
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 490 RSA*LILKNSATKDICSESGAFHPGMGSVCFHFLFSTKVSMDSTSR 353
R A L LK ATK ++ H M + CFHF +T + + +R
Sbjct: 78 RFAVLCLKPMATK----KANKMHVFMQAACFHFRIATMTVIGNMAR 119
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 131 GEWMLEFYAPWCPACNALAPV 193
G ++ YA WC C A++P+
Sbjct: 20 GYLAVDCYADWCGPCKAISPL 40
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.4 bits (53), Expect = 7.4
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Frame = +2
Query: 29 LIFSFSFIVLLCSTID----FASANKELNENNWKEILEGEWMLEFYAPWCPACNALAP-- 190
++FSF L I A K LN+ LEG W L+ PA L P
Sbjct: 189 IVFSFQGFGTLAGAIVTIILLACFEKPLNQRGEYTKLEGVWRLQMGLALVPALLVLIPRL 248
Query: 191 -VGRSSLHELPKTLSLY 238
+ S +E K L+ Y
Sbjct: 249 TMKESKSYEQSKALNKY 265
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 567 IVAMANIRYEPHDGKPYASIAYCGLPEVLDSS*R 466
+ M + +E DGKP I P+ LDS+ R
Sbjct: 299 LTCMDELSFEKTDGKPVLVIGATNRPDSLDSALR 332
>SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 629
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -3
Query: 328 PSFTWKIVGSAVTTNLPLRPGEL 260
P++TW ++GSAV N + P ++
Sbjct: 512 PNYTWSMLGSAVGQNGNVGPRQI 534
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,876,667
Number of Sequences: 5004
Number of extensions: 62070
Number of successful extensions: 188
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 188
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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