Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0348
(666 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 27 0.21
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 25 0.65
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 24 1.1
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 2.0
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 4.6
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 6.0
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 6.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 8.0
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 8.0
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 8.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.0
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 26.6 bits (56), Expect = 0.21
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 545 LIFAIATIFVGALVGLILVCVIDFL 619
+ + +I VG ++G ILVCV FL
Sbjct: 44 IALVLGSIIVGTVIGNILVCVAVFL 68
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 25.0 bits (52), Expect = 0.65
Identities = 13/58 (22%), Positives = 23/58 (39%)
Frame = +3
Query: 384 ENKKWKQTDPIPGWKAPDSLQMSLVAEFFKMSQALRGVHNMLWKHTAYHHGVHTLYSP 557
+ W Q + +Q ++ A + Q + M++ H HHG+H SP
Sbjct: 763 QGNSWSQQQVQQAQQVQQQMQAAMAA-VQQSQQRHQHAAQMIYGHQQSHHGLHINSSP 819
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 557 IATIFVGALVGLILVCVIDFLHPL 628
+ T+ VGAL GL+ V ++ PL
Sbjct: 295 VGTLIVGALAGLLSVLGYKYITPL 318
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 566 IFVGALVGLILVCVIDFLHPLRKSTRSLY 652
IFV VG I+ C++ + +P ++ + Y
Sbjct: 43 IFVTGFVGNIITCIVIWRNPSMQTPTNYY 71
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 524 LPSWGSYLIFAIATIFVGALVGLILVCV 607
+P G YLIFA+ + + V ++++ V
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNV 331
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 524 LPSWGSYLIFAIATIFVGALVGLILVCV 607
+P G YLIFA+ + + V ++++ V
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNV 331
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 560 ATIFVGALVGLILVCVI 610
A IFV LVG + CV+
Sbjct: 61 AVIFVTGLVGNVSTCVV 77
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 6.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 524 LPSWGSYLIFAIATIFVGALVGLILVCVIDFLHPLRKSTRSL 649
LP G YL+F + I VG + +++ VI +H + ST +
Sbjct: 295 LPLLGKYLLFTM--ILVG--LSVVITIVILNVHYRKPSTHKM 332
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 240 T*RERVFGSSCRELLPTGAR 181
T ER+FG R LLP G +
Sbjct: 592 TYNERIFGFPGRLLLPRGKK 611
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1
Query: 240 T*RERVFGSSCRELLPTGAR 181
T ER+FG R LLP G +
Sbjct: 592 TYNERIFGFPGRLLLPRGKK 611
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 8.0
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = +2
Query: 233 LYVLLQLSH*LAWS 274
+++LLQ+ H +AW+
Sbjct: 10 IFILLQMIHLIAWA 23
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 8.0
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 139 DARILRPMVSCLQCSSASWKELSTRAAKNSLPLRTAAVESLTRLV*VEDLLLP 297
D ++ V + S S+ ELS R+ K+ + +AA + L V + L+P
Sbjct: 819 DIKVPSTKVLAMISSVKSFMELSLRSVKDRETIISAAEKIAEELKIVPEELVP 871
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,676
Number of Sequences: 438
Number of extensions: 3982
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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