Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0348
(666 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 44 7e-05
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 42 4e-04
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 38 0.005
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 38 0.005
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 38 0.008
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 35 0.042
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 35 0.042
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 34 0.074
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 34 0.074
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 34 0.074
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 33 0.13
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 33 0.17
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 33 0.17
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 32 0.30
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 32 0.30
At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / P... 32 0.39
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 32 0.39
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 32 0.39
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 31 0.52
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 31 0.52
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 31 0.52
At4g33850.1 68417.m04803 glycosyl hydrolase family 10 protein si... 31 0.69
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 31 0.69
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 31 0.69
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 31 0.69
At5g18120.1 68418.m02127 expressed protein 30 1.6
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 30 1.6
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 29 2.1
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 29 2.1
At1g05640.1 68414.m00585 ankyrin repeat family protein contains ... 29 2.1
At2g31820.1 68415.m03886 ankyrin repeat family protein contains ... 29 2.8
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 29 2.8
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 29 3.7
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 29 3.7
At5g44010.1 68418.m05386 expressed protein 28 4.9
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 28 4.9
At5g65470.1 68418.m08233 expressed protein contains Pfam PF03138... 28 6.4
At5g50200.3 68418.m06216 expressed protein similar to unknown pr... 28 6.4
At5g50200.2 68418.m06218 expressed protein similar to unknown pr... 28 6.4
At5g50200.1 68418.m06217 expressed protein similar to unknown pr... 28 6.4
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 28 6.4
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 28 6.4
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 28 6.4
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 28 6.4
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 28 6.4
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 27 8.5
At2g18100.1 68415.m02104 expressed protein 27 8.5
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +2
Query: 83 SANKELNENNWKEILEGE---WMLEFYAPWCPACNALAPVGRSSLHELPKTLSL 235
SA+ ELN +N+ E++ W++EF+APWC C LAP + + + L + L
Sbjct: 163 SASVELNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKL 216
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = +2
Query: 95 ELNENNWK-EILE--GEWMLEFYAPWCPACNALAP 190
+L +N+K ++L G ++EF+APWC C +L P
Sbjct: 32 QLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTP 66
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +2
Query: 83 SANKELNENNWKE-ILEGE--WMLEFYAPWCPACNALAPVGRSSLHELPKTLSL 235
SA+ ELN +N+ + ++E W++EF+APWC C LAP + + L + L
Sbjct: 162 SASVELNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGKVKL 215
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +2
Query: 26 ILIFSFSFIVLLCSTIDFASANKELNENNWK-EILE--GEWMLEFYAPWCPACNALAP 190
+L F F L + +S +L +N+K ++L G ++EF+APWC C AL P
Sbjct: 11 LLTICFGFFDLSSALYGSSSPVVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTP 68
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 98 LNENNWKEILEGEW--MLEFYAPWCPACNALAPVGRSSLHEL 217
+ E N+ +++E ++EFYAPWC C +LAP ++ EL
Sbjct: 108 IKERNFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAATEL 149
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 258 TNSPGLSGRFVVTALPTIFHVKDGEFRQYKGPRDVESMLTFVENK 392
T L+ + V PT+ DGE + Y G R E+++T+V+ K
Sbjct: 162 TEENELAQEYRVQGFPTLLFFVDGEHKPYTGGRTKETIVTWVKKK 206
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAPVGRSSLHELPKTLSLYVLLQLSH*LAWSKWKICCYRTAYYFPC 319
+LE YAPWC C AL P+ L SL + K K + T +FP
Sbjct: 463 LLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITKMDGTTNEHPKAKAEGFPTILFFPA 522
Query: 320 ERWRVSSVQGST*C 361
V ++ C
Sbjct: 523 GNKTSEPVSSASSC 536
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 98 LNENNWKEILEGEW--MLEFYAPWCPACNALAPVGRSSLHEL 217
+ E N+ +++E ++EFYAPWC C +LAP ++ EL
Sbjct: 108 IKERNFTDVIENNQYVLVEFYAPWCGHCQSLAPEYAAAATEL 149
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 258 TNSPGLSGRFVVTALPTIFHVKDGEFRQYKGPRDVESMLTFVENK 392
T L+ + V PT+ DGE + Y G R E+++T+V+ K
Sbjct: 162 TEENELAQEYRVQGFPTLLFFVDGEHKPYTGGRTKETIVTWVKKK 206
Score = 31.5 bits (68), Expect = 0.52
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAPV 193
+LE YAPWC C AL P+
Sbjct: 463 LLEVYAPWCGHCQALEPM 480
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAPVGRSSLHEL 217
M+EFYAPWC AC AL P ++ EL
Sbjct: 120 MVEFYAPWCGACQALTPEYAAAATEL 145
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +3
Query: 258 TNSPGLSGRFVVTALPTIFHVKDGEFRQ-YKGPRDVESMLTFVENK 392
T L+ ++ + PT+F DGE R+ Y+G R + ++T+++ K
Sbjct: 157 TEEGDLAQKYEIQGFPTVFLFVDGEMRKTYEGERTKDGIVTWLKKK 202
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 107 NNWKEILEGEW---MLEFYAPWCPACNALAPV 193
NN+ EI+ E +LE YAPWC C + P+
Sbjct: 445 NNFDEIVLDESKDVLLEIYAPWCGHCQSFEPI 476
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 35.1 bits (77), Expect = 0.042
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAPV 193
+LEFYAPWC C LAP+
Sbjct: 396 LLEFYAPWCGHCQKLAPI 413
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAPVGRSSLHELPKTLSLYVLLQL 253
++EFYAPWC C LAP + L + VL ++
Sbjct: 51 VVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKI 88
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 35.1 bits (77), Expect = 0.042
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAPV 193
+LEFYAPWC C LAP+
Sbjct: 396 LLEFYAPWCGHCQKLAPI 413
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAPVGRSSLHELPKTLSLYVLLQL 253
++EFYAPWC C LAP + L + VL ++
Sbjct: 51 VVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKI 88
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 34.3 bits (75), Expect = 0.074
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +2
Query: 98 LNENNWKEIL---EGEWMLEFYAPWCPACNALAP 190
L +N+ EI+ + ++EFYAPWC C +LAP
Sbjct: 146 LTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAP 179
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAP 190
++EFYAPWC C LAP
Sbjct: 44 LVEFYAPWCGHCKKLAP 60
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 34.3 bits (75), Expect = 0.074
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +2
Query: 98 LNENNWKEIL---EGEWMLEFYAPWCPACNALAP 190
L +N+ EI+ + ++EFYAPWC C +LAP
Sbjct: 146 LTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAP 179
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAP 190
++EFYAPWC C LAP
Sbjct: 44 LVEFYAPWCGHCKKLAP 60
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 34.3 bits (75), Expect = 0.074
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAPV 193
++EFYAPWC C LAP+
Sbjct: 394 LIEFYAPWCGHCQKLAPI 411
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAPVGRSSLHEL 217
++EFYAPWC C LAP + EL
Sbjct: 50 VVEFYAPWCGHCQKLAPEYEKAASEL 75
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +2
Query: 56 LLCSTIDFASANKELNENNWKEIL---EGEWMLEFYAPWCPACNALAPV 193
++C D A+ +N++ W ++ + ++F+APWC C + P+
Sbjct: 65 VICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPI 113
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +2
Query: 11 DASRRILIFS-FSFIVLLCST-IDFASANKELNENN--WKEILEG--EWMLEFYAPWCPA 172
D +RR+ + + + L ST +DF + K+L + ++E L ++EFYA WC
Sbjct: 93 DINRRVAAVTVIAALSLFVSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEV 152
Query: 173 CNALAP 190
C LAP
Sbjct: 153 CRELAP 158
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = +2
Query: 56 LLCSTIDFASANKE---LNENNWK-EILEGEW--MLEFYAPWCPACNALAPV 193
+ C D +A E L+++ W+ ++LE + ++EF+APWC C + P+
Sbjct: 74 IACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPI 125
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 53 VLLCSTI-DFASANKELNENNWKEILEGEWMLEFYAPWCPACNALAPV 193
V+ C T+ D+ K NE+ K+++ +++F A WCP C +APV
Sbjct: 7 VIACHTVEDWTEKLKAANES--KKLI----VIDFTATWCPPCRFIAPV 48
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 32.3 bits (70), Expect = 0.30
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 137 WMLEFYAPWCPACNAL 184
W++ YAPWCP C A+
Sbjct: 365 WLVVLYAPWCPFCQAM 380
>At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / PAPS
reductase homolog (PRH26) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738760; identical to cDNA PAPS reductase homolog
(PRH26) GI:1710113
Length = 458
Score = 31.9 bits (69), Expect = 0.39
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 137 WMLEFYAPWCPACNAL 184
W++ YAPWCP C A+
Sbjct: 369 WIVVLYAPWCPFCQAM 384
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 31.9 bits (69), Expect = 0.39
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 137 WMLEFYAPWCPACNAL 184
W++ YAPWCP C A+
Sbjct: 376 WIVVLYAPWCPFCQAM 391
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 53 VLLCSTIDFASANKELNENNWKEILEGEWMLEFYAPWCPACNALAPVGRSSLHELPKTLS 232
V+ C T++ + N++L + N + L +++F A WC C +AP +LP L
Sbjct: 8 VIACHTVE--TWNEQLQKANESKTLV---VVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62
Query: 233 LYV 241
L V
Sbjct: 63 LKV 65
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 31.5 bits (68), Expect = 0.52
Identities = 11/49 (22%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 56 LLCSTIDFASANKELNENNWKEIL---EGEWMLEFYAPWCPACNALAPV 193
++C + + + +N++ W ++ G +++F+APWC C + P+
Sbjct: 71 VVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPL 119
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = +2
Query: 95 ELNENNWKEILEGE----WMLEFYAPWCPACNALAP 190
ELN N+ + + +LEF+A WCPAC P
Sbjct: 45 ELNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKP 80
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 31.5 bits (68), Expect = 0.52
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = +2
Query: 95 ELNENNWKEILEGE----WMLEFYAPWCPACNALAP 190
ELN N+ + + +LEF+A WCPAC P
Sbjct: 45 ELNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKP 80
>At4g33850.1 68417.m04803 glycosyl hydrolase family 10 protein
similar to tapetum specific protein GI:3885492 from [Zea
mays]
Length = 352
Score = 31.1 bits (67), Expect = 0.69
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 366 SMLTFVENKKWKQTDPIPGWKAPDSLQMSLVAEFFKM-SQALRGVHNMLWKHTAYHHG 536
++ TF KW T+ + G + D + FFK A+RG HN+LW Y G
Sbjct: 109 TVTTFANEMKWYSTEVVRGKE--DYSTADAMLRFFKQHGVAVRG-HNVLWDDPKYQPG 163
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 31.1 bits (67), Expect = 0.69
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 71 IDFASANKELNENNWKEILEGEWMLEFYAPWCPACNALAPVGRSSLHELPKTLSLYV 241
ID SA + LN K+ + +++FY WC +C A+ P + E P L L V
Sbjct: 96 IDITSAEQFLNA--LKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKEHPNILFLKV 150
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = +2
Query: 95 ELNENNWKEILEGE----WMLEFYAPWCPACNALAP 190
ELN N+ +L+ ++EF+A WCPAC P
Sbjct: 39 ELNTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYKP 74
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 53 VLLCSTIDFASAN-KELNENNWKEILEGEWMLEFYAPWCPACNALAPV 193
V+ C T++ + K+ NE+ K+++ +++F A WCP C +APV
Sbjct: 7 VIACHTLEVWNEKVKDANES--KKLI----VIDFTASWCPPCRFIAPV 48
>At5g18120.1 68418.m02127 expressed protein
Length = 289
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 267 PGLSGRFVVTALPTIFHVKDGEFRQYKGPRDVESMLTF 380
P + R+ + +LP+I V +Y GP+D+ S++ F
Sbjct: 114 PSVFSRYGIHSLPSILMVNQTMKMRYHGPKDLASLIQF 151
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAP 190
++ FYAPWC CN L P
Sbjct: 162 VVNFYAPWCYWCNLLKP 178
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 95 ELNENNWKEILEG-EWMLEF-YAPWCPACNALAP 190
ELN +N K +++G E+++ YAPWC L P
Sbjct: 79 ELNGDNTKRLIDGNEYVMVLGYAPWCARSAELMP 112
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 86 ANKELNENNWKEILEGE---WMLEFYAPWCPACNALAPVGRSSLHELPKTL 229
A K+ N++ ++L+ +++FYA WC C + P+ L+E+ +TL
Sbjct: 59 AAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPI----LNEVSETL 105
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 267 PGLSGRFVVTALPTIFHVKDGE-FRQYKGPRDVESMLTFVEN 389
P L+ ++ + ALPT KDG+ + +++G ++ +EN
Sbjct: 120 PSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIEN 161
>At1g05640.1 68414.m00585 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 627
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 500 VDSPKCLTHLEELSNQGHLQ*VRCLPSRDGIGL 402
V+ K T L +N+G ++ VRCL S DGI L
Sbjct: 319 VEDSKGNTPLHTATNKGRIKIVRCLVSFDGINL 351
>At2g31820.1 68415.m03886 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 662
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 500 VDSPKCLTHLEELSNQGHLQ*VRCLPSRDGIGLLPL 393
V+ K T L +N+G ++ VRCL S +GI L P+
Sbjct: 355 VEDNKGNTPLHIATNKGRIKIVRCLVSFEGINLNPI 390
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 29.1 bits (62), Expect = 2.8
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAPV 193
+++F A WCP C +AP+
Sbjct: 32 VIDFTASWCPPCRMIAPI 49
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAP 190
++EFY WC +C AL P
Sbjct: 127 IVEFYGTWCASCRALFP 143
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 140 MLEFYAPWCPACNALAP 190
++EFY WC +C AL P
Sbjct: 127 IVEFYGTWCASCRALFP 143
>At5g44010.1 68418.m05386 expressed protein
Length = 357
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 65 STIDFASANKELNENNWKEILEGEWML 145
ST F S +K+LNE+N E+ E W L
Sbjct: 322 STTRFCSCDKDLNEHNDCELAERVWCL 348
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 143 LEFYAPWCPACNALAP 190
++FYAPWC C L P
Sbjct: 54 VDFYAPWCGHCKRLNP 69
>At5g65470.1 68418.m08233 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown;
Length = 504
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 8 YDAS-RRILIFSFSFIVLLCSTIDFASANKEL 100
YDA RR ++ F F+VL C+ + +S++ E+
Sbjct: 4 YDAKDRRWILSMFFFVVLFCNNVSTSSSSSEV 35
>At5g50200.3 68418.m06216 expressed protein similar to unknown
protein (pir||T05562) isoform contains a non-consensus
AT acceptor splice site at intron 1
Length = 210
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 425 PSRDGIGLLPLFVLDKGQHGLYITWTL 345
PSR+G G+ VLD G+ L ITWTL
Sbjct: 43 PSREGPGV----VLDAGKDTLNITWTL 65
>At5g50200.2 68418.m06218 expressed protein similar to unknown
protein (pir||T05562) isoform contains a non-consensus
AT acceptor splice site at intron 1
Length = 210
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 425 PSRDGIGLLPLFVLDKGQHGLYITWTL 345
PSR+G G+ VLD G+ L ITWTL
Sbjct: 43 PSREGPGV----VLDAGKDTLNITWTL 65
>At5g50200.1 68418.m06217 expressed protein similar to unknown
protein (pir||T05562) isoform contains a non-consensus
AT acceptor splice site at intron 1
Length = 210
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 425 PSRDGIGLLPLFVLDKGQHGLYITWTL 345
PSR+G G+ VLD G+ L ITWTL
Sbjct: 43 PSREGPGV----VLDAGKDTLNITWTL 65
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 186 RQLEGALYTSCQKLSPSTYCCS*VTNSPGLSGRFVVTALPTIFHVKDGE 332
R +E A++ K + + V P ++ F VTA+PT VK G+
Sbjct: 63 RMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGK 111
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 27.9 bits (59), Expect = 6.4
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +2
Query: 14 ASRRILIFSFSFIVLLCSTIDFASANKELNENNWKE-ILEGEW--MLEFYAPWCPACNAL 184
+ RR L+ S + + L S E+ + +W++ +L+ E ++EFY WC C +
Sbjct: 43 SDRRSLLSSSASRLRLSPLCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMV 102
Query: 185 APVGRSSLHELPKTLSLYVL 244
+ + L+ Y+L
Sbjct: 103 HRIIDEIAGDYAGKLNCYLL 122
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 291 VTALPTIFHVKDGE-FRQYKGPRDVESMLTFVENKKWKQTD 410
+ + PT +GE +YKG RDVES+ FV + K +
Sbjct: 97 IHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVEETEKAAE 137
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 291 VTALPTIFHVKDGE-FRQYKGPRDVESMLTFVENKKWKQTD 410
+ + PT +GE +YKG RDVES+ FV + K +
Sbjct: 97 IHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVEETEKAAE 137
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 291 VTALPTIFHVKDGE-FRQYKGPRDVESMLTFVENKKWKQTD 410
+ + PT +GE +YKG RDVES+ FV + K +
Sbjct: 97 IHSYPTFMLFYNGEEVSKYKGKRDVESLKAFVVEETEKAAE 137
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 400 SKPIPSRDGRHLTHCKC 450
SKPI RDG +L CKC
Sbjct: 285 SKPIQKRDGCNLMTCKC 301
>At2g18100.1 68415.m02104 expressed protein
Length = 656
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 148 ILRPMVSCLQCSSASWKELSTRAA 219
+LRP++ CLQ S++W L AA
Sbjct: 68 LLRPVLRCLQIDSSAWHGLEEIAA 91
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,271,562
Number of Sequences: 28952
Number of extensions: 336870
Number of successful extensions: 1032
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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