Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0347
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 66 2e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 58 8e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 57 1e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 54 8e-08
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 4e-06
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 44 1e-04
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 42 4e-04
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 39 0.003
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 36 0.029
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 36 0.029
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 36 0.029
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 35 0.050
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 33 0.20
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 32 0.35
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 32 0.35
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 31 0.82
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 31 0.82
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 31 1.1
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 1.9
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 2.5
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/86 (34%), Positives = 50/86 (58%)
Frame = +1
Query: 247 FQQNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 426
F +NFY+ HP + K+S E+++ R + VSG P F F + + ++ +
Sbjct: 477 FNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRKLE 536
Query: 427 YKEPTPIQAQGWPIAMSGKNLVGVAK 504
Y +PT IQ Q PIA+SG++++G+AK
Sbjct: 537 YTQPTQIQCQALPIALSGRDIIGIAK 562
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 655
GSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI A F
Sbjct: 564 GSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRF 613
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +2
Query: 527 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 646
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVA 152
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +1
Query: 289 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 456
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = +1
Query: 247 FQQNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 423
F+++FY P + K +P E +E+R + E + V G P++ + + + +K
Sbjct: 64 FRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLKKN 123
Query: 424 GYKEPTPIQAQGWPIAMSGKNLVGVAKRVRQNVGLHLASHC 546
Y++PTPIQAQ P+ MSG++++ + + + + + C
Sbjct: 124 SYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHREC 164
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 515 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 655
K +Y P + P I G IA+V+ PTRELA QI + F
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKF 167
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/64 (35%), Positives = 41/64 (64%)
Frame = +1
Query: 313 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 492
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 493 GVAK 504
GVA+
Sbjct: 143 GVAE 146
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/54 (51%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADF 655
GSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ F
Sbjct: 148 GSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKF 201
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +1
Query: 262 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 441
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 442 PIQAQGWPIAMSGKNLV 492
PIQ Q P+ +SG++++
Sbjct: 221 PIQMQVLPVLLSGRDVM 237
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/86 (29%), Positives = 46/86 (53%)
Frame = +1
Query: 247 FQQNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 426
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 427 YKEPTPIQAQGWPIAMSGKNLVGVAK 504
++ PTPIQ Q MSG++++G+A+
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAE 117
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 634
GSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 119 GSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +1
Query: 301 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 468
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 469 AMSGKNLVG 495
G G
Sbjct: 197 MAHGPKKSG 205
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +2
Query: 527 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQI 634
Y P + + P + G G A+V++PTRELAQQI
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQI 221
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 655
GSGKT AY+LP + + Q P+AL +APTRELA+QI A F
Sbjct: 526 GSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKF 575
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 337 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
VSG I F E F + + + GY+ PTP+Q PI M+G++L+ A+
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQ 524
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +1
Query: 328 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ A+
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQ 756
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP + + N P A+ +APTRELA QI A F
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKF 811
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +1
Query: 328 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ A+
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQ 179
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQI 634
G+GKTL++ LP + + + + +RG P LV+APTRELA+Q+
Sbjct: 120 GTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQV 163
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQV 643
+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V
Sbjct: 131 SGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKV 178
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 643
GSGKTLA+++P I + Q DG ALV++PTRELA Q +V
Sbjct: 97 GSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEV 141
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 364 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
++ F + G+ G+ PT IQ QG P+A+SG++++G AK
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAK 95
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 652
GSGKTLA+++P +V + + + +G ++++PTREL+ Q VA D
Sbjct: 619 GSGKTLAFLVP-VVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARD 666
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 406 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
QG+K MG+ T IQ + + G++L+G AK
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAK 617
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 643
+G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ+V
Sbjct: 43 SGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKV 84
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 35.9 bits (79), Expect = 0.029
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQIQQVA 646
GSGKTLAY+ P +VH + R G P A ++ P RELA QI + A
Sbjct: 425 GSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQILKTA 475
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 652
NG+GKT AY++P + + + ALVL PTRELA Q Q+ +
Sbjct: 93 NGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIE 137
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 373 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
FE+ + G+ G+ +P+PIQ + P+A++G++++ AK
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAK 92
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 35.9 bits (79), Expect = 0.029
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 652
NG+GKT AY++P + + + ALVL PTRELA Q Q+ +
Sbjct: 93 NGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIE 137
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 373 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
FE+ + G+ G+ +P+PIQ + P+A++G++++ AK
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAK 92
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 35.1 bits (77), Expect = 0.050
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 634
GSGKT A+ LP + + + P G A+VL PTRELA QI
Sbjct: 54 GSGKTAAFALPILQKLCDDPY-----GIFAVVLTPTRELAFQI 91
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 364 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
I FE+ + + + V GYK+PTP+Q PI ++L+ A+
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQ 920
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 640
GSGKT A+++P + G AL+L+PTRELA Q Q+
Sbjct: 328 GSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQK 369
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 640
GSGKT A+ LP + + + P AL+L PTRELA QI +
Sbjct: 11 GSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISE 50
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 33.1 bits (72), Expect = 0.20
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 14/58 (24%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQ 637
GSGKTLA+ +P I HI Q P +G +AL++APTRELA Q++
Sbjct: 178 GSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 406 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 501
+ V +G+ PTPIQA P+A+ GK++ A
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACA 54
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 631
G+GKT A++LP + + +P + LV+ PTRELA Q
Sbjct: 57 GTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAIQ 96
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 587 PIALVLAPTRELAQQIQQV 643
P ALVL+PTRELA QIQ+V
Sbjct: 4 PQALVLSPTRELANQIQKV 22
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +1
Query: 349 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW--PIAMSGKNLVGVAKRVRQNV 522
++H P++ + FP Y + Y P P QA W + +G + K + +
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEWLERVRPNGWPSPEIVKEIFEQ- 64
Query: 523 GLHLA 537
G HLA
Sbjct: 65 GCHLA 69
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVA 646
+G+GKT A++L + ++ P P + L+PT ELA+Q +VA
Sbjct: 151 SGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVA 193
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 325 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 477
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 31.1 bits (67), Expect = 0.82
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 328 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 501
EV + G P + F +Y + +G PT +Q WP + G+++ GVA
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVA 231
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD 652
GSGK LAY+LP I I + +GP+ L+L + ++ V D
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCED 285
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 634
G+GK+L ++LP++ Q P RG G I +V PTRELA Q+
Sbjct: 207 GTGKSLVFLLPSV-----QDP-GRGYGTIIVV--PTRELASQM 241
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 259 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 399
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -3
Query: 152 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 39
+CHR Q NY C ++ Q+W+H + SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 500 PNGSGKTLAYILPAIV 547
P GSGK+L Y LPA+V
Sbjct: 42 PTGSGKSLCYQLPAVV 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,923,692
Number of Sequences: 59808
Number of extensions: 394495
Number of successful extensions: 1160
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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