Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0347
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 74 1e-13
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 67 9e-12
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 67 1e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 66 3e-11
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 50 1e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 47 1e-05
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 46 2e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 46 2e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 46 2e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 46 2e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 38 0.005
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 38 0.005
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 38 0.005
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 38 0.006
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 38 0.006
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.008
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 38 0.008
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 38 0.008
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 37 0.011
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 37 0.011
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 37 0.011
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 36 0.019
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 36 0.019
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 36 0.019
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 36 0.025
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 36 0.025
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 35 0.044
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 35 0.044
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 35 0.044
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.13
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 33 0.13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.13
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 33 0.13
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 33 0.13
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 33 0.13
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.31
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 30 1.2
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.8
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.8
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.8
Z81047-8|CAB02830.2| 323|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 8.8
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 27 8.8
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 27 8.8
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 27 8.8
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 27 8.8
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 655
GSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF
Sbjct: 176 GSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF 225
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/85 (32%), Positives = 54/85 (63%)
Frame = +1
Query: 250 QQNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 429
+++FY + V +R YE++++ + ++VT+ G V P+ F EA P + + + +
Sbjct: 91 EKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-LLYGKF 149
Query: 430 KEPTPIQAQGWPIAMSGKNLVGVAK 504
++PT IQ+ WPIAMSG++++ +AK
Sbjct: 150 QKPTVIQSISWPIAMSGRDIISIAK 174
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 67.3 bits (157), Expect = 9e-12
Identities = 28/64 (43%), Positives = 43/64 (67%)
Frame = +1
Query: 313 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 492
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 493 GVAK 504
GVA+
Sbjct: 343 GVAE 346
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ F
Sbjct: 348 GSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKF 401
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/50 (58%), Positives = 39/50 (78%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 655
GSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F
Sbjct: 312 GSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKF 361
Score = 61.7 bits (143), Expect = 4e-10
Identities = 26/86 (30%), Positives = 49/86 (56%)
Frame = +1
Query: 247 FQQNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 426
F +NFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 225 FNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSE 284
Query: 427 YKEPTPIQAQGWPIAMSGKNLVGVAK 504
Y++PTPIQA P A+SG++++G+AK
Sbjct: 285 YEQPTPIQAMAIPSALSGRDVLGIAK 310
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 655
GSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F
Sbjct: 351 GSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 247 FQQNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 423
F++NFY + + + EV+ YR + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 424 GYKEPTPIQAQGWPIAMSGKNLVGVAK 504
Y +PT IQAQ P MSG++++G+AK
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGIAK 349
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 6/50 (12%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQ 637
GSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+
Sbjct: 131 GSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIE 180
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 340 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV++
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQ 129
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +1
Query: 331 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ A+
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQ 211
Score = 31.9 bits (69), Expect = 0.41
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 11/54 (20%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQI 634
GSGKT A+++P + I P R+ P ALVL+PTREL+ QI
Sbjct: 213 GSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 322 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 501
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 502 K 504
+
Sbjct: 184 Q 184
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A F
Sbjct: 186 GSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKF 245
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 322 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 501
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 502 K 504
+
Sbjct: 168 Q 168
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A F
Sbjct: 170 GSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKF 229
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 322 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 501
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 502 K 504
+
Sbjct: 165 Q 165
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A F
Sbjct: 167 GSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKF 226
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 268 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 444
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 445 IQAQGWPIAMSGKNLVGVA 501
IQ QG P+A+SG++++G+A
Sbjct: 216 IQIQGIPVALSGRDMIGIA 234
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 634
GSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 237 GSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Frame = +2
Query: 509 SGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 640
+GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 429 AGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2
Query: 500 PNGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 655
P GSGKTLA++LP + I N G AL+L+P+REL QI V F
Sbjct: 54 PTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPF 103
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 643
+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V
Sbjct: 75 SGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKV 116
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 643
+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V
Sbjct: 75 SGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKV 116
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 652
NG+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ +
Sbjct: 89 NGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVE 133
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/49 (38%), Positives = 34/49 (69%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 652
GSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++
Sbjct: 115 GSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSE 162
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 643
GSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 136 GSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP + + + + G+G P ++L PTRELA QI F
Sbjct: 388 GSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 361 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
P + F EAN + +Q+ V GY + TPIQ P+ G +++ A+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQ 386
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP + + + + G+G P ++L PTRELA QI F
Sbjct: 388 GSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 361 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
P + F EAN + +Q+ V GY + TPIQ P+ G +++ A+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQ 386
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP + + + + G+G P ++L PTRELA QI F
Sbjct: 388 GSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKF 441
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 361 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
P + F EAN + +Q+ V GY + TPIQ P+ G +++ A+
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQ 386
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP + + ++ + G+G P ++L PTREL QI F
Sbjct: 599 GSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 373 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
F EAN + +++ V GY + TPIQ P+ G +++ A+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQ 597
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP + + ++ + G+G P ++L PTREL QI F
Sbjct: 599 GSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 373 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
F EAN + +++ V GY + TPIQ P+ G +++ A+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQ 597
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRR-GDG---PIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP + + ++ + G+G P ++L PTREL QI F
Sbjct: 599 GSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKF 652
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 373 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
F EAN + +++ V GY + TPIQ P+ G +++ A+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQ 597
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP + + + + G +G P ++L PTRELA QI F
Sbjct: 345 GSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKF 398
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 361 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
P + F +++ P +++ V+ GY TPIQ P+ GK+++ A+
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQ 343
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADF 655
GSGKT A++LP + + + + G +G P ++L PTRELA QI F
Sbjct: 345 GSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKF 398
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 361 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
P + F +++ P +++ V+ GY TPIQ P+ GK+++ A+
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQ 343
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 373 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 501
FE+ N + + GY +PTPIQ P+A++GK++ A
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACA 192
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 643
G+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 195 GTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 640
G+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 136 GTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAE 175
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 640
G+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 136 GTGKTLAFAIPILQKLSVDPY-----GIYALILTPTRELAFQIAE 175
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +2
Query: 500 PNGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 631
P GSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 171 PTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 640
GSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 36 GSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 640
GSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 203 GSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +1
Query: 391 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAK 504
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAE 201
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 491 LA*PNGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 634
+A P GSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 161 IAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQI 204
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 631
GSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 783 GSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 643
+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V
Sbjct: 72 SGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKV 113
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 631
GSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 783 GSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 652
GSGKT A+++P + + R G AL+++PTRELA Q +V +
Sbjct: 71 GSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKE 115
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 355 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
H +++ V + ++ G+ +PTPIQ + P M GK++V +++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSR 69
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 652
GSGKT A+++P + + R G AL+++PTRELA Q +V +
Sbjct: 71 GSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKE 115
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 355 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
H +++ V + ++ G+ +PTPIQ + P M GK++V +++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSR 69
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 643
+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V
Sbjct: 72 SGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKV 113
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 640
GSGKT A+ +P + + + P LVL PTRELA QI Q
Sbjct: 91 GSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQ 130
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +2
Query: 500 PNGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 634
P G GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 137 PTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 506 GSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 631
GSGKTLA ++P ++ + G AL+++PTRELA Q
Sbjct: 123 GSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQ 163
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 406 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
+G+K Y +PT IQ +++G ++VG AK
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAK 121
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 500 PNGSGKTLAYILPAIVH 550
P G+GK+L Y LPA+VH
Sbjct: 202 PTGAGKSLCYQLPAVVH 218
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 643
+G+GKT A++L + I+ P + LAPT ELA+QI +V
Sbjct: 257 SGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEV 298
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 643
+G+GKT A++L + I+ P + LAPT ELA+QI +V
Sbjct: 282 SGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEV 323
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 503 NGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 643
+G+GKT A++L + I+ P + LAPT ELA+QI +V
Sbjct: 666 SGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEV 707
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 130 RRIIAEFVASSKFGTTVSTAIIPV 59
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 130 RRIIAEFVASSKFGTTVSTAIIPV 59
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 486 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 307
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 306 D 304
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/61 (22%), Positives = 32/61 (52%)
Frame = -2
Query: 486 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLF 307
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+++F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 306 D 304
+
Sbjct: 86 N 86
>Z81047-8|CAB02830.2| 323|Caenorhabditis elegans Hypothetical
protein C41G6.10 protein.
Length = 323
Score = 27.9 bits (59), Expect = 6.7
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = -2
Query: 519 VLPDPFGYAN*ILSR-HSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNA 343
+LP GY+N ILS+ + + FF++ + TL+ ICF + IMNL +
Sbjct: 72 LLPICAGYSNGILSKVFKLHSHILMTLFVFFLSLQINTLI-----ICFLRKHKAIMNLRS 126
Query: 342 TYS-----YLVIISVLFDFIW 295
T S Y V++ ++ IW
Sbjct: 127 TSSVPNWIYHVLLGMIVFLIW 147
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 268 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 426
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 268 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 426
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +1
Query: 373 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
FE + +K + P+P+QA+ P+ + G++++ AK
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAK 67
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +1
Query: 373 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 504
FE + +K + P+P+QA+ P+ + G++++ AK
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAK 67
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 536 PAIVHINNQPPIRRGDG---PIALVLAPTRELAQQIQQV 643
P + ++ +P + DG P A+++APT+EL QI ++
Sbjct: 77 PQVDEMDFEPEHKTNDGSVGPSAVIIAPTKELITQIYKL 115
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 120 IILLDLATVAIDLEDLEDLVGKKNSLEVRTCVA 218
+I+ + ID++DL +V KN + + CVA
Sbjct: 236 LIIASTCWMIIDMDDLSTVVFHKNEITTKRCVA 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,973,674
Number of Sequences: 27780
Number of extensions: 298833
Number of successful extensions: 1076
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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