Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0346
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    47   1e-07
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    35   4e-04
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    33   0.002
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    32   0.003
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    23   1.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.2  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 47.2 bits (107), Expect = 1e-07
 Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
 Frame = +3

Query: 33  ILRASHQLIYSS--GWYLDHLKTGGDW--TEFFNKDPRDMVSGLSKDINVDNIVGGEXVM 200
           +L   +++I S+   WYLDH    G W  TE+ N      V   +K    D  +GGE  M
Sbjct: 472 LLELGYRIIVSTKDAWYLDH----GFWGTTEYHNW----RVVYNNKIPTGDGALGGEVCM 523

Query: 201 WTEVVNDMNIMSRVWPRAVL*LKDCGATNHRQHIKYT 311
           W E V+D ++ SRVWPRA    +    TN   ++K T
Sbjct: 524 WGEYVDDSSVESRVWPRAAAAAERLW-TNPSDYVKQT 559



 Score = 31.9 bits (69), Expect = 0.004
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +2

Query: 251 SCAVAERLWGHESQAAYQVYSRLEEHTCRMNARGIRAQ 364
           + A AERLW + S    Q   R   H  R+ ARGI A+
Sbjct: 541 AAAAAERLWTNPSDYVKQTERRFYRHRERLVARGIHAE 578


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 35.1 bits (77), Expect = 4e-04
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +3

Query: 162 INVDNIVGGEXVMWTEVVNDMNIMSRVWPRA 254
           +N   I+GGE  +W+E  ++ ++ +R+WPRA
Sbjct: 542 LNKKQILGGEACLWSEQFDETSLDTRLWPRA 572



 Score = 25.8 bits (54), Expect = 0.25
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
 Frame = +2

Query: 251 SCAVAERLWGHES------QAAYQVYSRLEEHTCRMNARGIRAQP------PSGPGFCL 391
           + A AER+W               VY+RL  H  R+ ARG+ A+          PG CL
Sbjct: 572 AAAFAERVWSDPQLDVTSFTIQEDVYTRLNTHRDRLVARGLGAEAMWPVWCAQNPGMCL 630


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 33.1 bits (72), Expect = 0.002
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +2

Query: 251 SCAVAERLWGHESQAA-YQVYSRLEEHTCRMNARGIR 358
           S A AER+W   S    Y +Y+RL   + R+ +RGIR
Sbjct: 530 SAAFAERIWSDPSAGDDYDIYTRLVSFSDRLKSRGIR 566



 Score = 32.3 bits (70), Expect = 0.003
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 177 IVGGEXVMWTEVVNDMNIMSRVWPRA 254
           ++GGE  +W+E V   ++ +R+WPR+
Sbjct: 505 VLGGEVCLWSEQVGPDSLETRIWPRS 530


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 32.3 bits (70), Expect = 0.003
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 177 IVGGEXVMWTEVVNDMNIMSRVWPRA 254
           ++G E  +WTE  +  ++ +R+WPRA
Sbjct: 514 VLGAEAALWTEQADSASVDTRLWPRA 539


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +2

Query: 35  PKSKSPVNLFLWLVP*PSENWRRLDGIFQQGPSGYG 142
           P ++ P  +  +  P P ENW  +    ++G   YG
Sbjct: 5   PYAQPPFGVLRFKAPQPPENWTGVLDATKEGDPCYG 40


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 472 GLIQNFFNIPSTVQILVIPKIGDIV 546
           GL+   FN+P +   + +P  G ++
Sbjct: 632 GLLHRQFNLPPSKDTIAVPNNGYVI 656


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 472 GLIQNFFNIPSTVQILVIPKIGDIV 546
           GL+   FN+P     + +P  G +V
Sbjct: 632 GLLHRQFNLPPAKDTIAVPNNGYVV 656


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -2

Query: 257 HSSWPYSAHNVHVVNNFCPH--DXFATYNVV 171
           H+SW     N+    N+ PH    F+ Y ++
Sbjct: 316 HASWVNHLSNIEDCLNYVPHISTGFSPYEIL 346


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 87   LKTGGDWTEFFNKDPRDMVSGLSKDINVDNIVGG 188
            +K    W +F NK    + +  SK I V   +GG
Sbjct: 1869 IKPHDTWADFDNKFYEKVTAYKSKGIKVLVAIGG 1902


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -2

Query: 299 MLPVIRGPTVFQLQHSSWPYS 237
           ++P    P+V +L H  WP++
Sbjct: 64  LIPQPLHPSVPRLGHPQWPFA 84


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 104 IASSFQMVKVPARGID 57
           + S FQM K+  +G+D
Sbjct: 67  LISGFQMQKIATKGLD 82


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 104 IASSFQMVKVPARGID 57
           + S FQM K+  +G+D
Sbjct: 67  LISGFQMQKIATKGLD 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,020
Number of Sequences: 336
Number of extensions: 2524
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)