Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0344
(621 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 137 6e-33
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 136 1e-32
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 115 4e-26
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 65 4e-11
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 52 4e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 5e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.75
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 1.3
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.3
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 29 3.0
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.0
SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066) 28 5.3
SB_12344| Best HMM Match : ATP-synt_B (HMM E-Value=1.9) 28 5.3
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 7.0
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 7.0
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 7.0
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 28 7.0
SB_33404| Best HMM Match : ShTK (HMM E-Value=2.1e-10) 27 9.3
SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38) 27 9.3
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 137 bits (332), Expect = 6e-33
Identities = 64/86 (74%), Positives = 74/86 (86%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NTIFDAKRLIGR+++DATVQ+DMK WPF++ SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VL KMKETAEAYLG+ V +AVITVPA
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPA 148
Score = 127 bits (306), Expect = 8e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 246 MNP 254
+NP
Sbjct: 61 LNP 63
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLD
Sbjct: 150 FNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLD 186
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 136 bits (329), Expect = 1e-32
Identities = 61/86 (70%), Positives = 71/86 (82%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NT+FDAKRLIGRKF+D V DM HWPF V +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VLTKMKETAEAYLG V +AV+TVPA
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPA 148
Score = 132 bits (318), Expect = 3e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 246 MNP 254
MNP
Sbjct: 61 MNP 63
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
F+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLD
Sbjct: 150 FHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLD 186
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 132 bits (319), Expect = 2e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 246 MNPT 257
MNPT
Sbjct: 61 MNPT 64
Score = 111 bits (268), Expect = 3e-25
Identities = 63/111 (56%), Positives = 72/111 (64%), Gaps = 25/111 (22%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEV--- 421
P NTIFDAKRLIGR+F+D V+ DMKHW FEV ++ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 422 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPA 508
SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPA 173
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLD
Sbjct: 243 FNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLD 279
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +2
Query: 416 EVSSMVLTKMKETAEAYLGKTVQNAVITVPA 508
++SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPA 241
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1
Query: 511 FNDSQRQATKDAG 549
FNDSQRQATKDAG
Sbjct: 175 FNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 115 bits (276), Expect = 4e-26
Identities = 54/86 (62%), Positives = 67/86 (77%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NT+FDAKRLIGR ++D +VQ D+K +PF+V KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VLTKMKETAEAYLGK V +AV+TVPA
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPA 846
Score = 99 bits (238), Expect = 1e-21
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 254
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+D
Sbjct: 848 FNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMD 884
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 69.3 bits (162), Expect = 2e-12
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NTIFDAKRLIGRKFEDATVQADMKHWPFEVFS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 433
NTI KR IGRKF D VQ ++ H P++V I+V Y G+ + F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 434 LTKMKETAEAYLGKTVQNAVITVPA 508
T++K TAE L V + VI+VP+
Sbjct: 181 FTRLKTTAEIALKTKVTDCVISVPS 205
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 239
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 618
+ D QR+ DA +GLN LR++N+ TA ++AYG+
Sbjct: 207 YTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGI 242
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 246 MNP 254
+NP
Sbjct: 90 INP 92
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDG-GKPKIKVAYKGEDKTFFPEEVSS 427
P NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 428 MVLTKMKETAEAYLGKTVQNAVITVPATSMTLKDKPQKMQVPSLA 562
V+ K++ AE L TV AV++VPA +K + ++ SLA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPA-EFDIKQRNATVKAASLA 195
Score = 50.8 bits (116), Expect = 9e-07
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +1
Query: 508 DFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 618
+F+ QR AT A +++G+ VLR+INEPTAAA+AYGL
Sbjct: 179 EFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGL 215
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +2
Query: 371 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 508
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPA 47
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/61 (55%), Positives = 37/61 (60%), Gaps = 24/61 (39%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAAIAYGL 618
FND+QRQATKDAGTI+GL+ VLRIINEPTAAAIAYGL
Sbjct: 49 FNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGL 108
Query: 619 D 621
D
Sbjct: 109 D 109
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 135 GKVEIIANDQGNRTTPSYVAFTDTERLI 218
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 618
FN ++R+A A + GLNVL+I+N TA A+ YGL
Sbjct: 116 FNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
Score = 34.3 bits (75), Expect = 0.081
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 365 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 505
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 144 EIIANDQGNRTTPSYVAFT-DTERL 215
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 362 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPATSMTLKDKPQK 541
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 542 MQ 547
Q
Sbjct: 714 SQ 715
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -1
Query: 459 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLKTSKGQCFMSACTVASSNLRPMR 280
S F+F ST + +S +KV+ SPL + + P+ + G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 279 RLASNIVL 256
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 53 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 229
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 230 QEPGGDEPHNTIFDA 274
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 252 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 154
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 547 LHLLWLVFESH*SRGNRDNCILHSFAKIS 461
++ LWL F + S + D C+LHS A ++
Sbjct: 415 IYTLWLDFSRYYSSASSDICVLHSIAHLA 443
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 12 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 98
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066)
Length = 727
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 517 H*SRGNRDNCILHSFAKISFGSFLHFRKHHGTDFLGEKGFVFTLI 383
H GN+ +CIL F+K +F H R DF G +G T +
Sbjct: 19 HLDHGNQTDCILLDFSK-AFDRVAHGRLLQKLDFYGIRGKPLTWV 62
>SB_12344| Best HMM Match : ATP-synt_B (HMM E-Value=1.9)
Length = 341
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/101 (23%), Positives = 40/101 (39%)
Frame = +2
Query: 227 RQEPGGDEPHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTF 406
R+ G + T + +IG F QAD+ + F+ K+++ F
Sbjct: 53 RKSTGKVDNSKTYTAGRYMIGPDFTFKKYQADLHFVQLDTFAVFTSGKLELL-----SVF 107
Query: 407 FPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPATSMTLKD 529
P +V S L+++ ETA VQ + T +KD
Sbjct: 108 IPNDVKSRYLSQVIETANEERETFVQREKLVRKETEKLIKD 148
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 94 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 237
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 409 PRGSQFHGAYENEGNCRSLSWQNCAECSYHGSRDFN 516
PRG Q Y G+C S+S +NC + S+ + +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 94 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 237
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +3
Query: 105 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVS 284
T++ + H I+ N G +TP + T A + + M PT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 285 SDVSSKMLLCKP 320
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 326 KHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 505
K+ F V+ GG+P ++ Y +DK+ V S + ++ E LG + ++ VP
Sbjct: 16 KNVHFAVWDIGGQPNLRKHYFTDDKSGLIYVVDSTDIQRLNEA--QLLGILQEKVMVDVP 73
Query: 506 ATSMTLK-DKPQKMQVPSLA 562
+ K D P ++ +A
Sbjct: 74 VVVVANKQDLPNVLKAGDIA 93
>SB_33404| Best HMM Match : ShTK (HMM E-Value=2.1e-10)
Length = 251
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 329 HWPFEVFSDGGKPKIKVAYKGEDKT 403
H+PF FS G+P IK + KT
Sbjct: 2 HYPFTAFSKNGRPTIKAIADMQGKT 26
>SB_39617| Best HMM Match : RVT_1 (HMM E-Value=4.7e-38)
Length = 1084
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 174 TTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLCK 317
TTP+ + TE GDA + T Q + P ++++ SK LLC+
Sbjct: 92 TTPAAEPLSCTEG-DGDATETLNPPQTTRQQNPPTITNETISKKLLCE 138
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,588,480
Number of Sequences: 59808
Number of extensions: 513942
Number of successful extensions: 1715
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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