Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0344
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 142 2e-34
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 136 2e-32
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 126 1e-29
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 126 1e-29
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 124 7e-29
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 124 7e-29
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 120 1e-27
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 117 6e-27
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 81 6e-16
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 78 6e-15
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 73 2e-13
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 64 8e-11
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 40 0.001
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 37 0.013
U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter... 30 1.5
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 29 2.0
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 4.7
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 28 6.2
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 8.2
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 27 8.2
AC025727-3|AAG23386.1| 228|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 142 bits (344), Expect = 2e-34
Identities = 64/87 (73%), Positives = 77/87 (88%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFS-DGGKPKIKVAYKGEDKTFFPEEVSS 427
PHNT+FDAKRLIGRKF+D VQ+DMKHWPF+V S +G KPK++V YKGE+K F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 428 MVLTKMKETAEAYLGKTVQNAVITVPA 508
MVL KMKETAEA+LG TV++AV+TVPA
Sbjct: 123 MVLLKMKETAEAFLGTTVKDAVVTVPA 149
Score = 126 bits (303), Expect = 2e-29
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 246 MNP 254
MNP
Sbjct: 61 MNP 63
Score = 74.5 bits (175), Expect = 5e-14
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD
Sbjct: 151 FNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLD 187
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 136 bits (328), Expect = 2e-32
Identities = 61/86 (70%), Positives = 75/86 (87%), Gaps = 1/86 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFS-DGGKPKIKVAYKGEDKTFFPEEVSS 427
PHNT+FDAKRLIGRKF+D VQ+DMKHWPF+V S +G KPK++V YKGE+K F PEE+SS
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 428 MVLTKMKETAEAYLGKTVQNAVITVP 505
MVL KMK+TAEA+L TV++AV+TVP
Sbjct: 123 MVLLKMKKTAEAFLEPTVKDAVVTVP 148
Score = 126 bits (303), Expect = 2e-29
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+K AVGIDLGTTYSCVGVF HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 246 MNP 254
MNP
Sbjct: 61 MNP 63
Score = 74.5 bits (175), Expect = 5e-14
Identities = 35/37 (94%), Positives = 36/37 (97%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD
Sbjct: 151 FNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLD 187
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 126 bits (304), Expect = 1e-29
Identities = 58/86 (67%), Positives = 70/86 (81%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VL KMKETAE YLG TV++AVITVPA
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPA 148
Score = 110 bits (264), Expect = 9e-25
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 246 MNP 254
NP
Sbjct: 61 RNP 63
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLD
Sbjct: 150 FNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLD 186
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 126 bits (304), Expect = 1e-29
Identities = 58/86 (67%), Positives = 70/86 (81%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V KGE + F PEE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VL KMKETAE YLG TV++AVITVPA
Sbjct: 123 VLQKMKETAETYLGHTVKDAVITVPA 148
Score = 110 bits (264), Expect = 9e-25
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 246 MNP 254
NP
Sbjct: 61 RNP 63
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLD
Sbjct: 150 FNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLD 186
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 124 bits (298), Expect = 7e-29
Identities = 56/86 (65%), Positives = 67/86 (77%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NTIFDAKRLIGR + D TVQAD+KHWPF+V KP ++V ++K F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VL KMKE AE+YLGK V+NAV+TVPA
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVVTVPA 179
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/59 (74%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 254
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
Score = 74.1 bits (174), Expect = 7e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FND+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLD
Sbjct: 181 FNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLD 217
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 124 bits (298), Expect = 7e-29
Identities = 56/86 (65%), Positives = 67/86 (77%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NTIFDAKRLIGR + D TVQAD+KHWPF+V KP ++V ++K F PEEVS+M
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VL KMKE AE+YLGK V+NAV+TVPA
Sbjct: 154 VLVKMKEIAESYLGKEVKNAVVTVPA 179
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/59 (74%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 254
+GIDLGTTYSCVGV+++G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINP 94
Score = 74.1 bits (174), Expect = 7e-14
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FND+QRQATKDAGTI+GLNV+RIINEPTAAAIAYGLD
Sbjct: 181 FNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLD 217
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 120 bits (288), Expect = 1e-27
Identities = 55/86 (63%), Positives = 69/86 (80%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V KGE + F EE+S+M
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAM 122
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VL KMKETAEA LG +V++AVITVPA
Sbjct: 123 VLQKMKETAEAVLGHSVRDAVITVPA 148
Score = 109 bits (263), Expect = 1e-24
Identities = 47/63 (74%), Positives = 57/63 (90%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+ A+GIDLGTTYSCVG++Q+GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 246 MNP 254
NP
Sbjct: 61 RNP 63
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FNDSQRQATKDA TI+GLN +RIINEPTAAA+AYGLD
Sbjct: 150 FNDSQRQATKDAATIAGLNAIRIINEPTAAALAYGLD 186
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 117 bits (282), Expect = 6e-27
Identities = 53/86 (61%), Positives = 65/86 (75%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
P NTIFDAKRLIGR + + TVQ D+KHWPF++ KP ++V E K F PEEVS+M
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAM 150
Query: 431 VLTKMKETAEAYLGKTVQNAVITVPA 508
VLTKMK+ AE+YLG V+NAV+TVPA
Sbjct: 151 VLTKMKQIAESYLGHEVKNAVVTVPA 176
Score = 98.7 bits (235), Expect = 3e-21
Identities = 46/59 (77%), Positives = 53/59 (89%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP 254
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINP 91
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/37 (86%), Positives = 37/37 (100%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FND+Q+QATKDAG+I+GLNV+RIINEPTAAAIAYGLD
Sbjct: 178 FNDAQKQATKDAGSIAGLNVVRIINEPTAAAIAYGLD 214
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 81.0 bits (191), Expect = 6e-16
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NTIFDAKRLIGRKFEDATVQADMKHWPFEVF-SDGGKPKIKVAYKGEDKTFFPEEVSSMV 433
NT+F KRLIGR++ED VQ D+K P+++ + G ++ + K + P +V + V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKVYSPSQVGAFV 148
Query: 434 LTKMKETAEAYLGKTVQNAVITVPA 508
L KMKETAE+YLG TV NAV+TVPA
Sbjct: 149 LMKMKETAESYLGTTVNNAVVTVPA 173
Score = 74.1 bits (174), Expect = 7e-14
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FNDSQRQATKDAG ISGLNVLR+INEPTAAA+AYGLD
Sbjct: 175 FNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLD 211
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 248
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 249 N 251
N
Sbjct: 90 N 90
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 77.8 bits (183), Expect = 6e-15
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NTIFDAKRLIGRKFEDATVQADMKHWPFEVF-SDGGKPKIKVAYKGEDKTFFPEEVSSMV 433
NT+F KRLIGR++ED VQ D+K P+++ + G ++ + K + P +V + V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA----QGKEYPPSQVGAFV 148
Query: 434 LTKMKETAEAYLGKTVQNAVITVPA 508
L KMKETAE+YLG TV N V+TVPA
Sbjct: 149 LMKMKETAESYLGTTVNNPVVTVPA 173
Score = 74.1 bits (174), Expect = 7e-14
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLD 621
FNDSQRQATKDAG ISGLNVLR+INEPTAAA+AYGLD
Sbjct: 175 FNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLD 211
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 248
K +GIDLGTT SCV + + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 249 N 251
N
Sbjct: 90 N 90
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-FSDGGKPKIKVAYKGEDKTFFPEEVSSMV 433
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 434 LTKMKETAEAYLGKTVQNAVITVPA 508
L +K AE LG V++AVITVPA
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPA 145
Score = 60.5 bits (140), Expect = 9e-10
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPT 257
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 258 TQYSMPNV 281
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 54.4 bits (125), Expect = 6e-08
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 618
FN +QR+AT++A I+GL VLRI+NEPTAAAIAY L
Sbjct: 147 FNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSL 182
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-FSDGGKPKIKVAYKGEDKTFFPEEVSSMV 433
N++FD KR+IGR+++D +Q DM WPF+V D G P +++ + F VSS++
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120
Query: 434 LTKMKETAEAYLGKTVQNAVITVPA 508
L +K AE LG V++AVITVPA
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPA 145
Score = 60.5 bits (140), Expect = 9e-10
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPT 257
++GIDLGTT+SCV +Q+G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 258 TQYSMPNV 281
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 54.4 bits (125), Expect = 6e-08
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 618
FN +QR+AT++A I+GL VLRI+NEPTAAAIAY L
Sbjct: 147 FNATQRRATEEAAEIAGLKVLRILNEPTAAAIAYSL 182
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 64.1 bits (149), Expect = 8e-11
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFE--DATVQADMKHWPFEVFSDG-GKPKIKVAYKGEDKTFFPEEV 421
P TI+DAKR IGR FE + +D K +PF++ D GK ++ K +PEE+
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 422 SSMVLTKMKETAEAYLGKTVQNAVITVPA 508
S+++ +K A +LG T+ VI+ PA
Sbjct: 155 GSLIIGYLKSAAAKHLGVTLGQVVISCPA 183
Score = 47.2 bits (107), Expect = 9e-06
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +3
Query: 57 KYKMAKAPA--VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIG 221
KY + P GIDLGTTYS +G++ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 222 DAAKNQVAMNP 254
A Q NP
Sbjct: 85 TRATEQQEHNP 95
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1
Query: 508 DFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 618
+FN+ QR T A I+ + V R+I+EPTAAA+AYGL
Sbjct: 184 EFNEKQRNFTAKAAEIAEMEVRRVISEPTAAALAYGL 220
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 NTIFDAKRLIGRKFEDATVQADMKHWPFEVFS-DGGKPKIKVAYKGEDKTFFPEEVSSMV 433
NT+ + K LIGRKF D Q + P +V ++V+Y GE TF PE+V + +
Sbjct: 62 NTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAAL 121
Query: 434 LTKMKETAEAYLG--KTVQNAVITVPA 508
LTK++ E+ L K V + V+ VP+
Sbjct: 122 LTKLRTIVESQLSDVKKVSDCVLAVPS 148
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 251
+G D+G +GV + G +E+I ND TP+ V+F +R +G AA+ V N
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTN 59
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 618
F D QR+A A +GLN LRI+NE TA A+AYG+
Sbjct: 150 FTDVQRRAVLSAIQYAGLNSLRIVNETTAIALAYGI 185
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 281 LIGRKFEDATVQADMKHWPFEVFS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 457
+I RK D K +PF F D + + YK E+K + E + +M+L K+
Sbjct: 80 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLAMILWNAKKVT 137
Query: 458 EAYLGKTVQNAVITVP 505
EAY +TV++ VITVP
Sbjct: 138 EAYADQTVKDVVITVP 153
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = +1
Query: 514 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 618
N ++R+A A I+GLN+L+++N+ +AAA+ YG+
Sbjct: 157 NQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGV 191
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 281 LIGRKFEDATVQADMKHWPFEVFS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETA 457
+I RK D K +PF F D + + YK E+K + E + +M+L K+
Sbjct: 96 MIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETLLAMILWNAKKVT 153
Query: 458 EAYLGKTVQNAVITVP 505
EAY +TV++ VITVP
Sbjct: 154 EAYADQTVKDVVITVP 169
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = +1
Query: 514 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 618
N ++R+A A I+GLN+L+++N+ +AAA+ YG+
Sbjct: 173 NQAERRAIASAAEIAGLNLLQLLNDGSAAALNYGV 207
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAA 230
A+ IDLGT + +G+ + G ++I N + R TP+ V D R DAA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +1
Query: 511 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 618
F ++R A + A ++GL VL++IN+ TAAA+++G+
Sbjct: 172 FTPAERLAVERAAQMAGLTVLQLINDGTAAALSHGI 207
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVFSDGGKPKIKVAYKGEDKTFFPEEVSSM 430
PH L+G+ + + + + F D K + +K +++ E +++M
Sbjct: 84 PHLVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAM 143
Query: 431 VLTKMKETAEAYL-GKTVQNAVITVP 505
+L K+ E Y +++ VITVP
Sbjct: 144 ILANAKKFTEEYAQAAEIKDVVITVP 169
>U41748-3|AAA83336.1| 452|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 8 protein.
Length = 452
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 197 HRHRASHRR--CRQEPGGDEPHNTIFDAKRLIGR-KFEDATVQADM 325
H+HR SHR Q+ GDE +N + DA R + ++ D + + M
Sbjct: 347 HQHRKSHRLRPSHQQQYGDEQNNAVADAGRSVNAPEYGDGSAPSHM 392
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/54 (22%), Positives = 29/54 (53%)
Frame = +3
Query: 159 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLCKP 320
D G+ ++V D +++IG+ + + T+Y++ + SS+++L +P
Sbjct: 12 DIGDGLFQTHVQLEDVQKVIGEQMNTKARLGENTKYTVIGDGNGFSSRVILVEP 65
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 136 GRWRSSPTTR-ATGPLRLMLRSQTPSVSSEMPPRT 237
G W R ATGP + + +Q P + S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/54 (20%), Positives = 27/54 (50%)
Frame = +3
Query: 159 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSSDVSSKMLLCKP 320
D G+ ++V D + +IG+ + + T+Y++ + S+++L +P
Sbjct: 12 DNGDGLFQTHVQLDDVQDVIGEQMNTEARLGKNTKYTVVGDGNGFMSRVILVEP 65
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 227 RQEPGGDEPHNTIFDAKRLIGRKFEDATVQAD 322
++ GD+P F +IGRK++D V+ D
Sbjct: 278 KERKDGDDPSTGGFSFLSMIGRKYDDEAVEDD 309
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 373 DLRFASITENLERPVLHVGLHSSIFELTSDETFGIEY 263
DLR +S L PVL +H+ FEL+S + I Y
Sbjct: 81 DLRSSSDKVLLRLPVLKQEVHNISFELSSSDVLAIMY 117
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -2
Query: 260 CCGVHRHLVLGGISDETLGVCERNIRRSGPVA 165
CC H G S T+G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>AC025727-3|AAG23386.1| 228|Caenorhabditis elegans Hypothetical
protein Y73E7A.5 protein.
Length = 228
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Frame = -3
Query: 487 ILHSFAKISFGSFLH---FRKHHGTDFLGEKGFVFT-----LICYLDLRFASITENLERP 332
I+ ++S+ S L FRK H FLGE ++ T ++ +L++ +T +L R
Sbjct: 11 IIGDIFRLSYQSALSHPLFRKCHFLKFLGEGSYITTEDMKFILKNFNLKYGFLTRSLRRT 70
Query: 331 VLHVGLHSSIFELTSDETFGI 269
+ + L +I L +++ G+
Sbjct: 71 KIDIKLLVNIPRLDFEKSPGL 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,591,260
Number of Sequences: 27780
Number of extensions: 358876
Number of successful extensions: 1132
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -