Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0343
(670 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 133 2e-32
SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces po... 126 2e-30
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 29 0.80
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 28 1.1
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 27 1.8
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 27 2.4
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 27 3.2
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 26 4.3
SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|... 26 5.6
SPBC21.01 |mis17|SPBC776.19|kinetochore protein Mis17|Schizosacc... 26 5.6
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 26 5.6
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 25 7.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 7.5
SPBC3E7.16c |leu3|SPBC4F6.03c|2-isopropylmalate synthase|Schizos... 25 9.9
SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr... 25 9.9
SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr 1|... 25 9.9
SPBC18H10.03 |tif35||translation initiation factor eIF3g|Schizos... 25 9.9
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 133 bits (322), Expect = 2e-32
Identities = 62/99 (62%), Positives = 79/99 (79%)
Frame = +2
Query: 251 QDVIGARRASWRIISSIEQKEETKGXEDKLNMIRAYRSQVEXELRDICSDILGVLDKYLI 430
+++IGARRASWRIISSIEQKEE++G + +I+ YR ++E EL DIC D+L VL+K+LI
Sbjct: 51 KNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLI 110
Query: 431 PSSQTGESKVFYYKMKGDYHRYLAEFRPATTARGCRELA 547
P++ TGESKVFYYKMKGDY+RYLAEF T C+E A
Sbjct: 111 PAATTGESKVFYYKMKGDYYRYLAEF---TVGEVCKEAA 146
Score = 119 bits (286), Expect = 4e-28
Identities = 78/191 (40%), Positives = 101/191 (52%), Gaps = 1/191 (0%)
Frame = +3
Query: 99 SEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKTXXXXXXX 278
+ RE++VY AKLAEQAERY+EMVE MK VA N ++L+VEERNLLSVAYK
Sbjct: 3 NSRENSVYLAKLAEQAERYEEMVENMKKVACSN---DKLSVEERNLLSVAYKNIIGARRA 59
Query: 279 XXXXXXXXNRRKKQKAXKTN*T*SEXXXXXXXXXXXXXXXXXXXXXXXXXXPAHRPENQK 458
++++ + + PA K
Sbjct: 60 SWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESK 119
Query: 459 FFITK*RATTTGTWPS-SDRQRPQEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFS 635
F K + + + +EAA++SL AYKAASDIA+ ELPPT P+RLGLALNFS
Sbjct: 120 VFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFS 179
Query: 636 VFYYGILNSPD 668
VFYY IL+SP+
Sbjct: 180 VFYYEILDSPE 190
>SPAC8E11.02c |rad24||14-3-3 protein Rad24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 126 bits (305), Expect = 2e-30
Identities = 57/86 (66%), Positives = 73/86 (84%)
Frame = +2
Query: 251 QDVIGARRASWRIISSIEQKEETKGXEDKLNMIRAYRSQVEXELRDICSDILGVLDKYLI 430
++VIGARRASWRI+SSIEQKEE+KG ++ +I+ YR ++E EL IC DIL VL+K+LI
Sbjct: 52 KNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLI 111
Query: 431 PSSQTGESKVFYYKMKGDYHRYLAEF 508
P++ + ESKVFYYKMKGDY+RYLAEF
Sbjct: 112 PNAASAESKVFYYKMKGDYYRYLAEF 137
Score = 124 bits (298), Expect = 2e-29
Identities = 81/191 (42%), Positives = 97/191 (50%), Gaps = 1/191 (0%)
Frame = +3
Query: 99 SEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKTXXXXXXX 278
+ RED VY AKLAEQAERY+ MVE MK+VAS +D ELTVEERNLLSVAYK
Sbjct: 4 TSREDAVYLAKLAEQAERYEGMVENMKSVAS---TDQELTVEERNLLSVAYKNVIGARRA 60
Query: 279 XXXXXXXXNRRKKQKAXKTN*T*SEXXXXXXXXXXXXXXXXXXXXXXXXXXPAHRPENQK 458
++++ K + P K
Sbjct: 61 SWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESK 120
Query: 459 FFITK*RATTTGTWPS-SDRQRPQEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFS 635
F K + + ++ Q +A+ SL YKAAS+IA EL PTHPIRLGLALNFS
Sbjct: 121 VFYYKMKGDYYRYLAEFAVGEKRQHSADQSLEGYKAASEIATAELAPTHPIRLGLALNFS 180
Query: 636 VFYYGILNSPD 668
VFYY ILNSPD
Sbjct: 181 VFYYEILNSPD 191
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 28.7 bits (61), Expect = 0.80
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 492 GTWPSSDRQRPQEAAENSLVAY 557
G WPS D + QE+ +SLVAY
Sbjct: 943 GLWPSDDLRNYQESTIDSLVAY 964
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 446 GESKVFYYKMKGDYHRYLAEFRPATTARGCRELAGR 553
G+ + YY+ + D YL+EF+ RG L R
Sbjct: 289 GDGNIRYYEYENDVFHYLSEFKSVDPQRGIAFLPKR 324
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 455 KVFYYKMKGDYHRYLAEFRPATTARGCRELAG 550
K F K DY +Y+ FR A CR G
Sbjct: 171 KEFLAHSKDDYAQYMIPFRDINVATSCRTFCG 202
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 453 DSPVCELGMRYLSRTPRMSEQMSRSSFSTW 364
DSP +G R +S+ R + RSS S+W
Sbjct: 481 DSPTKVIGKRNVSKASRTGQGRKRSSRSSW 510
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 510 DRQRPQEAAENSLVAYKAASDIAMTELPP 596
DR++PQE ++++A ++ +D T L P
Sbjct: 13 DREKPQEVRLSNIMAARSVADAIRTSLGP 41
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = -2
Query: 408 PRMSEQMSRSSFSTWLRYALIMFNLSSXPFVSSFCSM 298
P ++E + +S S+W+ A ++ + + P V FC++
Sbjct: 121 PTIAEDFNDTSSSSWIGSAYVLASNAVLPAVGVFCNI 157
>SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -2
Query: 216 SAHCRTRCVMLHSSSPPPFRHSAQPAQLTLLYT--HYLPFPTL 94
S+H + + H P F S QLTLL + YLP P +
Sbjct: 486 SSHREKKSIYQHKEYMPDFLSSRDEFQLTLLESTWQYLPDPNV 528
>SPBC21.01 |mis17|SPBC776.19|kinetochore protein
Mis17|Schizosaccharomyces pombe|chr 2|||Manual
Length = 441
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 87 SSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEER 230
SST S N ++ Q+E Y ++ + + + ++SD E +E R
Sbjct: 45 SSTRSSPASNQQNLEIVSQSEAYHKISDLDDSTSIFSISDQENILERR 92
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 504 SSDRQRPQEAAENSLVAYKAASDIAMTELPPTHPIR 611
+S RP ++ N +Y+ AS T+ PP HP+R
Sbjct: 390 NSPSLRPLQSLNNVQNSYRVAS----TQAPPPHPLR 421
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 425 LIPSSQTGESKVFYYKMKGDYHRYLAEFRPA 517
++ SS +K FY KM G+Y L F A
Sbjct: 45 ILESSGVNLTKAFYQKMLGNYPEVLPYFNKA 75
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 264 PITSCRRPTAGSSPPLSAHCRTRCVMLHSSSP 169
P+T PT+ S+P + +C T + ++S+P
Sbjct: 408 PVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTP 439
>SPBC3E7.16c |leu3|SPBC4F6.03c|2-isopropylmalate
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 584
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 120 THYLPFPTLWMTNDFTLTKS 61
T+YL FP + ND+TL+ +
Sbjct: 455 TYYLEFPGRFSVNDYTLSSN 474
>SPAC1687.10 |mcp1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 25.0 bits (52), Expect = 9.9
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 12/55 (21%)
Frame = +3
Query: 117 VYKAKLAEQAE----RYDEMVEAMKNVASR--------NVSDNELTVEERNLLSV 245
+YK KL E R DE+V MKN+ + N SD LT+ E L S+
Sbjct: 202 IYKEKLRFSLESRKSRVDEIVNEMKNMCGKNPTSELPTNYSDKTLTLWENELSSM 256
>SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 809
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 108 EDNVYKAKLAEQAERYDEMVEAMKNVASRNV 200
ED++++ + +Q Y E +E K ++NV
Sbjct: 713 EDSMHEIAIKKQHSTYSEALEVAKKAGTKNV 743
>SPBC18H10.03 |tif35||translation initiation factor
eIF3g|Schizosaccharomyces pombe|chr 2|||Manual
Length = 282
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 371 EXELRDICSDILGVLDKYLIPSSQTGESKVFYY 469
E ELRD+ G+ YL +TG +K F +
Sbjct: 215 EEELRDLFRRFGGIQRVYLAKDKETGRAKGFAF 247
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,372,563
Number of Sequences: 5004
Number of extensions: 44146
Number of successful extensions: 163
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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