Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0343
(670 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 9e-21
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 95 3e-20
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 85 7e-17
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15) 33 0.21
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_8944| Best HMM Match : RVT_1 (HMM E-Value=1.3e-05) 31 1.1
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 2.0
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 30 2.0
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6) 29 4.5
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 28 6.0
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 28 6.0
SB_37122| Best HMM Match : rve (HMM E-Value=1.3) 28 6.0
SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1) 28 7.9
SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_23563| Best HMM Match : rve (HMM E-Value=3.3e-25) 28 7.9
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 97.5 bits (232), Expect = 9e-21
Identities = 41/86 (47%), Positives = 67/86 (77%)
Frame = +2
Query: 251 QDVIGARRASWRIISSIEQKEETKGXEDKLNMIRAYRSQVEXELRDICSDILGVLDKYLI 430
++++G RR+SWR+ISSIE+K L +++ Y++ +E EL+D+C ++LG+L++ LI
Sbjct: 130 KNIVGQRRSSWRVISSIEEKT---AESSSLAIVKKYKACIEKELKDLCKEVLGILER-LI 185
Query: 431 PSSQTGESKVFYYKMKGDYHRYLAEF 508
P ++ E+KVFY+K+KGDY+RYLAEF
Sbjct: 186 PGAEDEENKVFYFKLKGDYYRYLAEF 211
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 96 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYK 254
M RE +Y AKL+EQ +RYDEM + MK V+ + +L+ EERNLLSV+YK
Sbjct: 81 MVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKY---PKLSKEERNLLSVSYK 130
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/93 (50%), Positives = 63/93 (67%)
Frame = +2
Query: 251 QDVIGARRASWRIISSIEQKEETKGXEDKLNMIRAYRSQVEXELRDICSDILGVLDKYLI 430
++V+GA+R+SWR+ISSIEQK E G E K YR +E EL ++C +L +L+ LI
Sbjct: 28 KNVVGAKRSSWRVISSIEQKLE--GSERKKQNTETYRQTIENELNEVCETVLKLLESKLI 85
Query: 431 PSSQTGESKVFYYKMKGDYHRYLAEFRPATTAR 529
P++Q+ ESKVFY KMKGDY+RY E A R
Sbjct: 86 PNAQSTESKVFYLKMKGDYYRYEGEVAGADRRR 118
Score = 58.0 bits (134), Expect = 6e-09
Identities = 54/170 (31%), Positives = 70/170 (41%), Gaps = 5/170 (2%)
Frame = +3
Query: 162 MVEAMKNVASRNVSDNELTVEERNLLSVAYKTXXXXXXXXXXXXXXXNRRKKQKAXKTN* 341
M +AMK +S+ L EERNLLSVAYK ++ + K
Sbjct: 1 MAKAMKEATE--ISET-LEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQN 57
Query: 342 T*SEXXXXXXXXXXXXXXXXXXXXXXXXXXPAHRPENQKFFITK*RATT---TGTWPSSD 512
T E P + K F K + G +D
Sbjct: 58 T--ETYRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEVAGAD 115
Query: 513 RQRPQEAAENSLVAYKAASDIAMTE--LPPTHPIRLGLALNFSVFYYGIL 656
R+R E + ++ AY A +IA + LPPT PIRLGLALNFSVFYY I+
Sbjct: 116 RRR--EVVQKAMKAYSEAQEIAEKDPKLPPTDPIRLGLALNFSVFYYEIV 163
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +3
Query: 537 ENSLVAYKAASDIAMT---ELPPTHPIRLGLALNFSVFYYGI 653
E +L AYK A + A T +L PT PIRLGLALNFSVF+Y I
Sbjct: 210 EKALQAYKEAKEAAETGDGKLAPTDPIRLGLALNFSVFHYEI 251
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 95.5 bits (227), Expect = 3e-20
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = +2
Query: 251 QDVIGARRASWRIISSIEQKEETKGXE-DKLNMIRAYRSQVEXELRDICSDILGVLDKYL 427
++VIGARRASWRII+SIEQKEE+KG + KL MIR YR +E EL+ IC +IL +LD L
Sbjct: 50 KNVIGARRASWRIITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSL 109
Query: 428 IPSSQTGESKVFYYKM 475
I +SQ+ ESKVFY K+
Sbjct: 110 IKNSQSEESKVFYNKI 125
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/53 (62%), Positives = 42/53 (79%)
Frame = +3
Query: 96 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYK 254
M+++E++VY AKLAEQAERYD+MV +MK VA EL+ E+RNLLSVAYK
Sbjct: 1 MADKEEHVYMAKLAEQAERYDDMVNSMKEVAKMG---TELSTEDRNLLSVAYK 50
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 84.6 bits (200), Expect = 7e-17
Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Frame = +2
Query: 251 QDVIGARRASWRIISSIEQKEETKGXEDKLNMIRAYRSQVEXELRDICSDILGVLDKYLI 430
++V+GARR+SWR+ISS+EQK E+ + + YR + EL C+++L +L+ YL+
Sbjct: 57 KNVVGARRSSWRVISSMEQK----APEEMAALTKKYREDITNELNGKCAEVLDILENYLL 112
Query: 431 PSSQTG---ESKVFYYKMKGDYHRYLAE 505
Q E+KVFY KM+GDYHRYL E
Sbjct: 113 KDGQDDINTEAKVFYLKMRGDYHRYLVE 140
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/47 (65%), Positives = 33/47 (70%)
Frame = +3
Query: 525 QEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYGILNSP 665
+E E S AYK AS A EL P+HPIRLGLALNFSVFYY I N P
Sbjct: 148 KENIEKSREAYKDASAKA-EELSPSHPIRLGLALNFSVFYYEIENKP 193
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/50 (58%), Positives = 35/50 (70%)
Frame = +3
Query: 105 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYK 254
RE+ ++ AK+AEQAERYD+MV AM V N+ EERNLLSVAYK
Sbjct: 11 REELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLND---EERNLLSVAYK 57
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +3
Query: 78 NHLSSTMS---EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVA 248
NH S + R + V AKLAEQ ER+++++ MK N S N+ E RNLLSV
Sbjct: 178 NHPSGVVQMQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNK---EHRNLLSVG 234
Query: 249 YK 254
YK
Sbjct: 235 YK 236
>SB_45953| Best HMM Match : LRR_1 (HMM E-Value=7.4e-15)
Length = 1427
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = -2
Query: 303 SMEEMIRQEARRAPITSCRRPTAGSSPPLSA---HCRTRCVMLHSSSPPPFRHSAQPAQL 133
S+ R E R P + P AG++PP S H ++ + PPP R S +
Sbjct: 484 SLSRQTRLEVNRTPSPTFSEPHAGAAPPRSRPTDHAAPAPTVVEPTGPPPIRISVEVQGK 543
Query: 132 TLL 124
T L
Sbjct: 544 TFL 546
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 230 EPAVGRLQDVIGARRASWRIISSIEQ-KEETKGXEDKLNMIRAYRSQVEXELRDICSD 400
EP +G L+ V G + + ++++ KEE +G +DKLN + +E L + D
Sbjct: 3427 EPVLGSLEPVSGDVNKNKEELENVKKLKEELEGAKDKLNSLNDAERVLEDALTSVSGD 3484
>SB_8944| Best HMM Match : RVT_1 (HMM E-Value=1.3e-05)
Length = 514
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 432 PAHRPENQKFFITK*RATTTGTWPSSDRQRPQEAAENSLVAYKAASDIAMTELPPTHPIR 611
P E++KF T + T D+ QEA N LVAY++ A T + P +R
Sbjct: 316 PRANGESEKFMQTLNKTERIATLEGKDKYERQEAIHNMLVAYRSTPHSA-TGVTPYEAMR 374
Query: 612 LGLALNFSVFY 644
G+++ + Y
Sbjct: 375 -GVSVRTKLDY 384
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +2
Query: 296 SIEQKEETKGXEDKLNMIRAYRSQVEXELRDICSDILGVLDK 421
++ Q++E + ++K+N + AY++ E +LR+ D++ K
Sbjct: 2026 AVYQEQELQSAKNKINRLEAYKTSYEEKLRNQQEDLVAAQQK 2067
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 282 QEARRAPITSCRRPTAGSSPPLSAHCRTRCVMLHSSSPPPFRHSAQ 145
+++ P+TS RR ++ PL++ RTR H S+P +S +
Sbjct: 238 RDSTTKPLTSTRRARDSTTKPLTSTRRTRASKKHESAPKSSPNSTE 283
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 240 TAGSSPPLSAHCRTRCVMLHSSSPPPFRHSAQPAQLTLLYTHYLPFP 100
TA S PP +A C T C + P P P T L H LP P
Sbjct: 40 TALSPPPATALCPTPC---YGPVPHPLLRPCVPPPATALVPHPLPRP 83
>SB_37483| Best HMM Match : Drf_FH1 (HMM E-Value=6.6)
Length = 237
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 180 SSSPPPFRH-SAQPAQLTLLYTHYLPFPTLWMTNDFTLTKSESPGHLF 40
+S P P+ S QPA T YT Y P T+ T + SP F
Sbjct: 73 ASQPAPYTPASGQPASYTPAYTPYTPASTVGRMPPTTSQSTPSPAPFF 120
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 275 ASWRIISSIEQKEETKGXEDKLNMIRAYRSQVEXELRDICSDILGVLDKYLI--PSSQTG 448
+S IS I +K+ +++ + Y Q E + S ++ LDKYLI S+TG
Sbjct: 980 SSLETISKIREKQRKDARQERKKEVSDYNWQELIENGKLPSLVVSELDKYLIHYNLSKTG 1039
Query: 449 ESK 457
+ K
Sbjct: 1040 KKK 1042
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 93 TMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAY 251
T+SERE KA++ A E A ++A + ++NE +E R+L +A+
Sbjct: 788 TISEREAIANKARIRSGALTLSETGPAFVDLALKVPAENEEKLENRDLEEMAW 840
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 275 ASWRIISSIEQKEETKGXEDKLNMIRAYRSQVEXELRDICSDILGVLDKYLI--PSSQTG 448
+S IS I +K+ +++ + Y Q E + S ++ LDKYLI S+TG
Sbjct: 1331 SSLETISKIREKQRKDARQERKKEVSDYNWQELIENGKLPSLVVSELDKYLIHYNLSKTG 1390
Query: 449 ESK 457
+ K
Sbjct: 1391 KKK 1393
>SB_37122| Best HMM Match : rve (HMM E-Value=1.3)
Length = 152
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +3
Query: 432 PAHRPENQKFFITK*RATTTGTWPSSDRQRPQEAAENSLVAYKAASDIAMTELP 593
P E++KF T + T D+ QEA N LV Y++ A P
Sbjct: 38 PRANGESEKFMQTLNKTERIATLEGKDKYERQEAIHNMLVTYRSTPQPATGVTP 91
>SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 111 DNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLL 239
D VY+ L RY+E+V + N + +N TV +R ++
Sbjct: 80 DEVYRPYLTTDETRYNEVVFVVDNTVYQRYHNNTKTVTDRVII 122
>SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 111 DNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEER 230
D VY+ L RY EMV + N + +N TV ++
Sbjct: 170 DEVYRPYLTTDETRYTEMVFVVDNTVYQRYQNNTKTVTDK 209
>SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1)
Length = 1139
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = -2
Query: 261 ITSCRRPTAGSSPPLSAH---CRTRCVMLHSSSPPPFRHSAQPAQLTLLYTHY 112
I S R+ A + ++ H C T V+L S P +R +PA +T T++
Sbjct: 498 ILSSRKRPAPITTTITNHRLNCHTNSVILSSRKRPTYRSRKRPAPITTTITNH 550
>SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 432 GMRYLSRTPRMSEQMSRSSFSTWLRYALIMFNLSSXPFVSSFCSMEE 292
G R RTP ++ + S +W YALI+F+L F+ C++ E
Sbjct: 77 GSRLKGRTPHLTRALM--SILSWSEYALILFSL----FIGVACNILE 117
>SB_23563| Best HMM Match : rve (HMM E-Value=3.3e-25)
Length = 640
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +3
Query: 432 PAHRPENQKFFITK*RATTTGTWPSSDRQRPQEAAENSLVAYKAASDIAMTELPPTHPIR 611
P E++KF + T D+ QEA N LVAY++ A T + P +R
Sbjct: 387 PRANGESEKFMQILNKTERIATLEGKDKYERQEAIHNMLVAYRSTPHPA-TGVTPYEAMR 445
Query: 612 LGLALNFSVFY 644
G+++ + Y
Sbjct: 446 -GVSVRTKLDY 455
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,910,694
Number of Sequences: 59808
Number of extensions: 378311
Number of successful extensions: 1157
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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