Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0343
         (670 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.           26   1.2  
EF519383-1|ABP68492.1|  506|Anopheles gambiae LRIM1 protein.           26   1.2  
EF519381-1|ABP68490.1|  506|Anopheles gambiae LRIM1 protein.           26   1.2  
EF519380-1|ABP68489.1|  506|Anopheles gambiae LRIM1 protein.           26   1.2  
EF519374-1|ABP68483.1|  506|Anopheles gambiae LRIM1 protein.           26   1.2  
EF519371-1|ABP68480.1|  506|Anopheles gambiae LRIM1 protein.           26   1.2  
EF519369-1|ABP68478.1|  506|Anopheles gambiae LRIM1 protein.           26   1.2  
EF519366-1|ABP68475.1|  506|Anopheles gambiae LRIM1 protein.           26   1.2  
EF519359-1|ABP68468.1|  506|Anopheles gambiae LRIM1 protein.           26   1.2  
EF519372-1|ABP68481.1|  506|Anopheles gambiae LRIM1 protein.           25   1.6  
EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.           25   1.6  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         25   2.9  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        24   3.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.6  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.7  
EF519363-1|ABP68472.1|  503|Anopheles gambiae LRIM1 protein.           23   8.7  

>EF519384-1|ABP68493.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506


>EF519383-1|ABP68492.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506


>EF519381-1|ABP68490.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506


>EF519380-1|ABP68489.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506


>EF519374-1|ABP68483.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506


>EF519371-1|ABP68480.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506


>EF519369-1|ABP68478.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506


>EF519366-1|ABP68475.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506


>EF519359-1|ABP68468.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQNLAS 506


>EF519372-1|ABP68481.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELLVREQNLAS 506


>EF519368-1|ABP68477.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERNLLS 242
           + +LAE+  R  ++  EA   VAS N +  EL V E+NL S
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELLVREQNLAS 506


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/19 (52%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
 Frame = -3

Query: 65 NPNRQV--TYSPRWPRPPT 15
          +P+R +  T   RWPRPPT
Sbjct: 13 SPSRPILTTRGRRWPRPPT 31


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +2

Query: 170 GDEECSITQRVRQ*ADSGGEEPAVGRLQD 256
           G    S T+R  Q A SGG   AV +LQD
Sbjct: 81  GSASRSETERELQQALSGGNSQAVPKLQD 109


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 221  GGEEPAVGRLQDVIGARRASWRII-SSIEQKEETKGXED 334
            GG  P  G+ + +IG+ +A+  I+ S+I  KE      D
Sbjct: 2062 GGGTPGGGKSKGIIGSTQANIGIVDSNISPKESPDSIGD 2100


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
 Frame = -2

Query: 198 RCVMLHSSSPPPFRHSAQPAQLTLLYTHYL--PFPTLWMTNDFTLTKSES 55
           RC    + SPP   HS+Q    T   T     P P    T   T T   S
Sbjct: 6   RCSPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGAS 55


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
 Frame = -2

Query: 198 RCVMLHSSSPPPFRHSAQPAQLTLLYTHYL--PFPTLWMTNDFTLTKSES 55
           RC    + SPP   HS+Q    T   T     P P    T   T T   S
Sbjct: 6   RCSPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGAS 55


>EF519363-1|ABP68472.1|  503|Anopheles gambiae LRIM1 protein.
          Length = 503

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 123 KAKLAEQAERYDEMV-EAMKNVASRNVSDNELTVEERN 233
           + +LAE+  R  ++  EA   VAS N +  EL V E+N
Sbjct: 466 ETQLAEENARLKKLNGEADLAVASANATLQELVVREQN 503


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,909
Number of Sequences: 2352
Number of extensions: 12075
Number of successful extensions: 40
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)