Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0342
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    25   0.60 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   5.6  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   9.8  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +2

Query: 341 NKMPNILCRVVRTAHISGDIVR 406
           NK+ N+   ++ + H++GDIV+
Sbjct: 189 NKISNLNTSLIHSTHLNGDIVK 210



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 60  CAKCLPETCRTNTDV 104
           CA C+P+   TN +V
Sbjct: 23  CAICVPKITSTNNEV 37


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = -3

Query: 99  QCWSGKFPEGTWRIHFVL 46
           QCW    P+  W+++  L
Sbjct: 171 QCWIEFHPQWKWQVYMTL 188


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 6   TLEDDDTSGSLRGLVQNVCAKC 71
           T E ++    +   +QN CAKC
Sbjct: 53  TPEGEELKKDIPDALQNECAKC 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,387
Number of Sequences: 336
Number of extensions: 3195
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)