Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0340
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    27   0.15 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.3  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   9.9  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 198 FP-IRVHVTTNSTLTSDHPLSLRPHNRKACP 287
           FP + V+V+ N T+   HP S  P N  +CP
Sbjct: 144 FPSMSVNVSMNMTMHGYHPSSSYPANEISCP 174


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 493 GK*GDLNPSSPRYYYFSF 546
           G+ G+L      Y+YFSF
Sbjct: 43  GRKGELKQHKSDYFYFSF 60


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 471 SSTLFSFMSTDTLALLDVVSCTVGGLSLLM 382
           S  LF+  S+  L LLD VSC V  + L++
Sbjct: 281 SFLLFTLYSS--LLLLDYVSCVVALIILIL 308


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -2

Query: 471 SSTLFSFMSTDTLALLDVVSCTVGGLSLLM 382
           S  LF+  S+  L LLD VSC V  + L++
Sbjct: 207 SFLLFTLYSS--LLLLDYVSCVVALIILIL 234


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 493 GK*GDLNPSSPRYYYFSF 546
           G+ G+L      Y+YFSF
Sbjct: 43  GRKGELKQHKSDYFYFSF 60


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 561 PRVLIERKVIVPWRAR 514
           PR + E K   PWR +
Sbjct: 468 PRTITESKNFEPWREK 483


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/50 (22%), Positives = 25/50 (50%)
 Frame = +3

Query: 126 INLQVNNTIEQILDFTEDSDKLLGFPIRVHVTTNSTLTSDHPLSLRPHNR 275
           +++++ N    I+D T+ S      P+++ +   + L      SL+P N+
Sbjct: 82  VHIKLTNRESSIIDKTKISFNFSQGPVKIMLQNATDLFIKSLESLKPGNQ 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,766
Number of Sequences: 336
Number of extensions: 2915
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)