Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0340
         (574 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023505-1|AAY84905.1| 1231|Drosophila melanogaster LD15018p pro...    28   7.8  
AE014298-1282|AAF46448.3| 1231|Drosophila melanogaster CG7065-PA...    28   7.8  

>BT023505-1|AAY84905.1| 1231|Drosophila melanogaster LD15018p
           protein.
          Length = 1231

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 298 PVGATDRR--LLLDAKRHGQDFVPSRCRFRHKKRESSNCTADDVQ*R*RIRRHKTEEGRR 471
           P+ AT +    ++D      D  PSR R  HK+R  S   +     R  +RR ++   RR
Sbjct: 415 PIVATSKLPDAVIDISDDDVDSPPSRSRHSHKRRSISRSLSPKRGGRRAVRRSRSRSPRR 474

Query: 472 FLHR 483
             +R
Sbjct: 475 SYNR 478


>AE014298-1282|AAF46448.3| 1231|Drosophila melanogaster CG7065-PA
           protein.
          Length = 1231

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +1

Query: 298 PVGATDRR--LLLDAKRHGQDFVPSRCRFRHKKRESSNCTADDVQ*R*RIRRHKTEEGRR 471
           P+ AT +    ++D      D  PSR R  HK+R  S   +     R  +RR ++   RR
Sbjct: 415 PIVATSKLPDAVIDISDDDVDSPPSRSRHSHKRRSISRSLSPKRGGRRAVRRSRSRSPRR 474

Query: 472 FLHR 483
             +R
Sbjct: 475 SYNR 478


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,658,766
Number of Sequences: 53049
Number of extensions: 559953
Number of successful extensions: 1422
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1422
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)