Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0339
(401 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 31 0.26
01_05_0560 - 23288078-23288370,23288448-23288733 30 0.79
09_04_0727 + 19765175-19765384,19765523-19765595,19766476-197665... 29 1.0
01_06_0359 + 28722524-28722613,28722794-28722863,28723062-287231... 29 1.0
07_03_0163 + 14588041-14588266,14588835-14589001,14589880-145900... 29 1.8
11_05_0108 + 19123855-19124163,19125483-19126019 28 2.4
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 2.4
04_03_0904 + 20717005-20718087 28 3.2
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 27 4.2
09_04_0365 - 16962608-16963174,16963301-16963486,16963824-169638... 27 5.6
04_01_0445 + 5812277-5813893 27 5.6
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 27 5.6
01_01_0206 - 1770622-1771347 27 5.6
08_01_0500 + 4338111-4338195,4339910-4340042,4340116-4340187,434... 27 7.3
07_03_1393 - 26245105-26246862 27 7.3
03_01_0286 - 2208242-2208249,2208399-2208506,2209482-2210226 27 7.3
12_02_1174 - 26696869-26698191 26 9.7
12_01_0191 + 1413287-1413346,1413504-1413632,1416819-1416998,141... 26 9.7
11_01_0476 - 3672812-3672866,3673356-3673454,3685385-3686340 26 9.7
09_02_0543 + 10427321-10428315,10428440-10429154 26 9.7
09_02_0082 - 4060018-4061604 26 9.7
08_02_0537 - 18313265-18313291,18313352-18315460 26 9.7
08_02_0391 - 16612929-16613867 26 9.7
08_01_0904 - 8916550-8917730,8917762-8918534,8919200-8920029 26 9.7
07_01_1154 - 10850206-10850318,10850528-10850658,10850998-108511... 26 9.7
06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216 26 9.7
05_02_0090 + 6507378-6507481,6507495-6507627,6507658-6507715,650... 26 9.7
02_02_0728 + 13416481-13416889,13416979-13417065,13417220-134173... 26 9.7
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768... 26 9.7
01_01_0239 + 1983267-1984008,1984148-1984180,1984280-1985394 26 9.7
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 31.5 bits (68), Expect = 0.26
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 34 PRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHT 174
P P T H I S +DD+ R VR +P+N ++ + S +T
Sbjct: 2064 PEPPETGTHRIEFSAVDDMDTGSCRSPVRDTPDPDNQKSELSGSGNT 2110
>01_05_0560 - 23288078-23288370,23288448-23288733
Length = 192
Score = 29.9 bits (64), Expect = 0.79
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 31 VPRAPSTADHPILPSKIDDVQLDPNRRYVRS 123
+PR P A H +L S DDV DP+ RYV S
Sbjct: 120 LPR-PLRAGHYVLSSPPDDVDHDPDHRYVFS 149
>09_04_0727 + 19765175-19765384,19765523-19765595,19766476-19766570,
19766666-19768450,19768533-19768721,19768816-19768958,
19769075-19769320,19769975-19770059,19770117-19770191,
19770304-19770369,19770466-19770712,19770824-19771242
Length = 1210
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 252 TPVPTLPPFNPKPIYIDMGNRYRRHASED-QEELRHYDEHFL 374
T +P LP NP+P+ D G AS+D E+L F+
Sbjct: 1117 TELPELPELNPEPMVTDNGENAAMPASDDIPEQLEVVKRRFM 1158
>01_06_0359 +
28722524-28722613,28722794-28722863,28723062-28723159,
28724029-28724167,28724243-28724370,28724500-28724592,
28724707-28724757,28725405-28725470,28725568-28725633,
28725900-28725977,28726248-28726427,28726502-28726577,
28726660-28726823,28727569-28727931
Length = 553
Score = 29.5 bits (63), Expect = 1.0
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 195 ADREPP*HKGPAVFVPSRETPVPTLPPFNPKPIYIDMGN 311
A+ E P + PAV VPS E +PP PKP +D G+
Sbjct: 317 AEEEKPQIEEPAVAVPSTE----VVPPPPPKPEVVDTGD 351
>07_03_0163 +
14588041-14588266,14588835-14589001,14589880-14590068,
14590193-14590315,14590531-14590793,14590882-14590976,
14591529-14591965,14592461-14592481
Length = 506
Score = 28.7 bits (61), Expect = 1.8
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 97 DPNRRYVRSVTNPENNEASIEHSHHTVDTGLDQPIESH-RNTRDLRFLYPRGKLL 258
DP+ + +++ P+ A HS D GL +PIE++ RD ++ R +L+
Sbjct: 151 DPSAS-IENLSQPKRPRAEFSHSDIIGDPGLHKPIEAYPPEIRDQSIVFERMQLI 204
>11_05_0108 + 19123855-19124163,19125483-19126019
Length = 281
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = -1
Query: 290 WLGVKRRKRWNRSFPRGYKNRRSLVLRWLSIGWSSPVSTV*CECSMDASLFSGLVTLRTY 111
W G++R K R P + + RW SIG S+ S V + A S +V + Y
Sbjct: 64 WRGLRRMKTGRRRTPVQGSRMSAKLERWWSIGASAKDSQVPNQMESSAMNSSWVVEIERY 123
Query: 110 L 108
+
Sbjct: 124 I 124
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 207 PP*HKGPAVFVPSRETPVPTLPPFNPKPIYIDMG 308
PP H P P+ TPVPT PP P + G
Sbjct: 446 PPAHAPPVATPPTLATPVPT-PPVTAPPADVPPG 478
>04_03_0904 + 20717005-20718087
Length = 360
Score = 27.9 bits (59), Expect = 3.2
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 9/42 (21%)
Frame = +3
Query: 192 PADREPP*HKGPAVFVPSRETPV---------PTLPPFNPKP 290
P +PP P + P + TP PT PP+ PKP
Sbjct: 59 PKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPTPPPYTPKP 100
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 192 PADREPP*HKGPAVFVPSRETPVPTLPPFNPKP 290
P PP +K P+ TP PT P + P+P
Sbjct: 150 PKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQP 182
Score = 27.5 bits (58), Expect = 4.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 192 PADREPP*HKGPAVFVPSRETPVPTLPPFNPKP 290
P PP +K P+ TP PT P + P+P
Sbjct: 118 PPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQP 150
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 207 PP*HKGPAVFVPSRETPVPTLPPFNPKP 290
PP +K P+ TP PT P + P+P
Sbjct: 175 PPSYKPQPKPTPTPYTPTPTPPSYKPQP 202
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 207 PP*HKGPAVFVPSRETPVPTLPPFNPKP 290
PP +K P+ TP PT P + P+P
Sbjct: 195 PPSYKPQPKPTPTPYTPTPTPPSYKPQP 222
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 207 PP*HKG-PAVFVPSRETPVPTLPPFNPKP 290
PP H P + P+ P PT P + P+P
Sbjct: 102 PPAHTPTPPTYTPTPTPPKPTPPTYKPQP 130
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -1
Query: 131 LVTLRTYLRFGSSCTSSIFEGRIGWSAVLG 42
LV R R G S S ++EGRI WSA G
Sbjct: 1845 LVLRRVQTRAGLSKLSPMWEGRIEWSASPG 1874
>09_04_0365 -
16962608-16963174,16963301-16963486,16963824-16963896,
16964307-16964497,16964982-16965198,16965394-16965797,
16966593-16966658,16966668-16966721,16966945-16967079,
16967194-16967391,16967734-16967918,16968990-16969527
Length = 937
Score = 27.1 bits (57), Expect = 5.6
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Frame = +3
Query: 225 PAVFVPSRETPVPTLPPFNPKPIYIDMGNRYRRH----ASEDQEELRHYDEH 368
PA P P P PP P+P+ I + + A D +RH D H
Sbjct: 23 PATAPPPPPPPTPPRPPQKPEPVSIHGETWHDSYAWMGALSDAAAMRHMDVH 74
>04_01_0445 + 5812277-5813893
Length = 538
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 25 DNVPRAPSTADHPILPS 75
D+VP AP+TADH P+
Sbjct: 519 DDVPEAPATADHRTAPA 535
>02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 240 PSRETPVPT-----LPPFNPKPIYIDMGNRYRRHASEDQEELRHY 359
P+R+ PVP LPP P P + + Y +H + Q++L H+
Sbjct: 982 PTRQLPVPPTPQQPLPPPPPPPSLQQLHHPY-QHQQQQQQQLYHH 1025
>01_01_0206 - 1770622-1771347
Length = 241
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 231 VFVPSRETPVPTLPPFNPKP 290
+F + PVP LPP +PKP
Sbjct: 68 LFAGGKLLPVPPLPPVHPKP 87
>08_01_0500 +
4338111-4338195,4339910-4340042,4340116-4340187,
4340524-4340587,4341383-4341459,4341586-4341657,
4341741-4341853,4341995-4342126,4342204-4342545,
4342628-4343022,4343293-4343603,4343967-4344066
Length = 631
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 225 PAVFVPSRETPVPTLPPFNPKPIY 296
P++ P P P PPF+P P Y
Sbjct: 173 PSLCGPGTTKPCPGAPPFSPPPPY 196
>07_03_1393 - 26245105-26246862
Length = 585
Score = 26.6 bits (56), Expect = 7.3
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +3
Query: 243 SRETPVPTLPPFNPKPIYIDMGNRYRRHASEDQEELRHYDEHFLIPRD 386
S E PVP PKP D+ R+R + R Y L+P D
Sbjct: 176 SYEAPVP-----GPKPGECDVAWRFRNRREKSWRRYRDYRRFVLVPGD 218
>03_01_0286 - 2208242-2208249,2208399-2208506,2209482-2210226
Length = 286
Score = 26.6 bits (56), Expect = 7.3
Identities = 34/118 (28%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
Frame = -1
Query: 386 VPRNQKVLIIMPQFFLILRRMSSVTVSHINIYWLGVKRRKRWNRSFPRGYKNRRSLVLRW 207
+PR +L++ ++LR S+ VS ++Y L K N+SFP G L
Sbjct: 3 IPRALLLLLLHVAVVVVLR---SLPVSSADLYALVYKGCS--NQSFPGGAVPPTVAALSS 57
Query: 206 LSIGWSSPVSTV*CECSMDASLFS--GLVTLRTYLRFGSSCTSSIFEGRIGWSAVLGA 39
S+ S AS S GL R L GS C + + WS V GA
Sbjct: 58 SLSDQSASAKFYKTSSSSSASSTSVFGLFQCRGDLS-GSDCAACVSRAMSSWSEVCGA 114
>12_02_1174 - 26696869-26698191
Length = 440
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 192 PADREPP*HKGPAVFVPSRETPVPTLPPFNPKP 290
P PP K P V + P PTLPP +P P
Sbjct: 193 PPPTRPPSVKPPVV--QPKPQPPPTLPPPSPPP 223
>12_01_0191 +
1413287-1413346,1413504-1413632,1416819-1416998,
1417747-1417938,1418533-1418673,1418785-1418912,
1419088-1419262,1419664-1419852,1420628-1420749,
1420829-1420874
Length = 453
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 163 SVQWTPRYFLDW*HCEH 113
S WTPRY LD C H
Sbjct: 370 STLWTPRYTLDLNSCSH 386
>11_01_0476 - 3672812-3672866,3673356-3673454,3685385-3686340
Length = 369
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 228 AVFVPSRETPVPTLPPFNPKPIYIDMGNRYRRHASEDQ--EELRHYDE 365
A + S TP P+ P P+P + + Y A++D+ EE + Y+E
Sbjct: 3 ACSITSSTTPAPSPPTRPPQPPSLSLLPAYVTKAADDEECEEWQAYEE 50
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 192 PADREPP*HKGPAVFVPSRETPVPTLPPFNPKPIYI 299
P+ P P V P+ + P P PP NP P+ I
Sbjct: 76 PSPHSPSPSNAPWV-APAADIPPPPPPPPNPLPVII 110
>09_02_0082 - 4060018-4061604
Length = 528
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 207 PP*HKGPAVFVPSRETPVPTLPPFNPKPIYIDMG 308
PP P P+ TPVPT PP P + +G
Sbjct: 337 PPAPAPPVATPPTPATPVPT-PPMTAPPADVPLG 369
>08_02_0537 - 18313265-18313291,18313352-18315460
Length = 711
Score = 26.2 bits (55), Expect = 9.7
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 254 SFPRGYK-NRRSLVLRWLSIGWSS 186
SFP Y+ +R LVLRW++ G+ S
Sbjct: 180 SFPEDYEIDRERLVLRWIAEGFIS 203
>08_02_0391 - 16612929-16613867
Length = 312
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +3
Query: 240 PSRETPVPTLPPFNPKPIYIDMGNRYRRHASEDQEE 347
PS T PP NP P +D H + D+++
Sbjct: 236 PSSSASAATPPPLNPPPFVVDTFLGEDDHLAADEDD 271
>08_01_0904 - 8916550-8917730,8917762-8918534,8919200-8920029
Length = 927
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/20 (55%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -1
Query: 251 FPRGYK-NRRSLVLRWLSIG 195
FPRG++ R+SL+ RWL+ G
Sbjct: 441 FPRGHRIRRKSLLRRWLAEG 460
>07_01_1154 -
10850206-10850318,10850528-10850658,10850998-10851110,
10851221-10851307,10852873-10853000,10853132-10853210,
10853262-10853354,10854211-10854295,10855000-10855085,
10855183-10855375,10856891-10856970
Length = 395
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +2
Query: 5 RYGCIKVTMFLVRQVLQTIRFFLRKSTTCSSIQTEGMFAVSPIQKITRRPLNTH 166
R+ + +V ++L + F L CS I G+F + +++ + PL H
Sbjct: 324 RHLMVSTGCIIVLEILYKMDFSLLGFLLCSVILGFGIFEATSLERSKKSPLEAH 377
>06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216
Length = 218
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 118 RSVTNPENNEASIEHSHHTVDTGLD 192
+ V + N+ I+H HH TGLD
Sbjct: 17 KRVYHLSTNKKEIKHRHHKASTGLD 41
>05_02_0090 +
6507378-6507481,6507495-6507627,6507658-6507715,
6508756-6508814,6509127-6509169,6509325-6509422,
6509619-6509744
Length = 206
Score = 26.2 bits (55), Expect = 9.7
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 289 QYILIWETVTDDMRRRIKKNCGI 357
+Y ++WE +++ + R +KNC I
Sbjct: 167 RYNIVWEDISEKLTTRNRKNCCI 189
>02_02_0728 +
13416481-13416889,13416979-13417065,13417220-13417351,
13417474-13417539,13417754-13418919
Length = 619
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 223 PLCYGGSRSAGQVQYQLYDVSVQWTPRY 140
PL S G+VQ+ + D+++ WT +Y
Sbjct: 344 PLFTTASEFNGEVQFLITDMAIWWTRKY 371
>01_01_0975 -
7686297-7686458,7687117-7687245,7687754-7687831,
7688011-7688469,7690648-7690788,7691771-7692421
Length = 539
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = -2
Query: 244 EGTKTAGPLCYGGSRSAGQVQYQLYDVSVQWTPRYFLDW*HCEHTFGLDRAARRR 80
EG P S +AG+ + V V WTP + G+D+A R
Sbjct: 190 EGHSKRKPSSSSSSAAAGKNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSR 244
>01_01_0239 + 1983267-1984008,1984148-1984180,1984280-1985394
Length = 629
Score = 26.2 bits (55), Expect = 9.7
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 221 GTCGFCTLEGNSCSNASSV*PQANIY*YGKPLPTTCVGGSRRIAAL**ALSDSEG 385
G C CT G C +S A + G P+ C G +R AL +LS + G
Sbjct: 212 GDCNACTASGGRCRYDASTSAFACLCSDGGMRPSICDGKNRGKLALIVSLSAAAG 266
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,804,857
Number of Sequences: 37544
Number of extensions: 301353
Number of successful extensions: 1172
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -