Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0339
(401 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036) 33 0.087
SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 33 0.087
SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09) 33 0.087
SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) 31 0.27
SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31) 31 0.27
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.35
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 0.81
SB_44218| Best HMM Match : rve (HMM E-Value=1.5e-12) 28 2.5
SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13) 28 2.5
SB_19358| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12) 28 2.5
SB_48760| Best HMM Match : bZIP_1 (HMM E-Value=0.95) 28 3.3
SB_35622| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40) 28 3.3
SB_25055| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 3.3
SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08) 28 3.3
SB_7903| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_4770| Best HMM Match : Exo_endo_phos (HMM E-Value=0.031) 27 4.3
SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_33309| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 4.3
SB_19122| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06) 27 5.7
SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_21518| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 5.7
SB_16280| Best HMM Match : PA14 (HMM E-Value=0.00074) 27 5.7
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 27 5.7
SB_59480| Best HMM Match : ZU5 (HMM E-Value=2.4e-38) 27 7.6
SB_52416| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_50241| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_48962| Best HMM Match : Cadherin (HMM E-Value=0) 27 7.6
SB_48206| Best HMM Match : LTXXQ (HMM E-Value=3) 27 7.6
SB_45989| Best HMM Match : TFIIE_alpha (HMM E-Value=5) 27 7.6
SB_21742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_30109| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_57115| Best HMM Match : HALZ (HMM E-Value=7.6) 26 10.0
SB_56062| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_51124| Best HMM Match : DUF1106 (HMM E-Value=7) 26 10.0
SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) 26 10.0
SB_20469| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_58143| Best HMM Match : RCSD (HMM E-Value=5.9) 26 10.0
SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_52927| Best HMM Match : RCSD (HMM E-Value=5.9) 26 10.0
SB_49711| Best HMM Match : SWIM (HMM E-Value=0.068) 26 10.0
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_39539| Best HMM Match : VWA (HMM E-Value=1.8e-12) 26 10.0
SB_32642| Best HMM Match : IL10 (HMM E-Value=2.5) 26 10.0
SB_27408| Best HMM Match : Methyltransf_7 (HMM E-Value=0.14) 26 10.0
SB_26161| Best HMM Match : Herpes_LP (HMM E-Value=1.7) 26 10.0
SB_23193| Best HMM Match : Lipoprotein_17 (HMM E-Value=2.3) 26 10.0
SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058) 26 10.0
SB_20769| Best HMM Match : Exo_endo_phos (HMM E-Value=0.022) 26 10.0
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_15149| Best HMM Match : HALZ (HMM E-Value=7.6) 26 10.0
SB_4000| Best HMM Match : Pkinase_Tyr (HMM E-Value=1.2e-09) 26 10.0
>SB_50285| Best HMM Match : SAP (HMM E-Value=0.0036)
Length = 1136
Score = 33.1 bits (72), Expect = 0.087
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 25 DNVPRAPSTADHPI--LPSKIDDV--QLDPNRRYVRSVTNPENNEASIEHS-HHTVDTGL 189
+ + RA ADH I + K+D QLD N +Y++ + NP+ + ++ V
Sbjct: 253 EEIERAKVAADHLISEVKDKLDIAKEQLDDNAKYIKCLENPDEADKYVKQKIQQRVKRTA 312
Query: 190 DQPIESHR 213
+ +ESHR
Sbjct: 313 ENLVESHR 320
>SB_45789| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 519
Score = 33.1 bits (72), Expect = 0.087
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 207 PP*HKGPAVFVPSRE--TPVPTLPPFNPKPIYIDMGNRYRRHASEDQEELRHYDEHFLIP 380
PP GP P RE TP PT PP P + + R R AS+ + Y IP
Sbjct: 35 PPIPHGPRPLPPLREPPTPAPTPPPALPSTPTLPLAPRPRPTASQPTTRTQ-YSGGGAIP 93
Query: 381 RDIFPRI 401
+ PR+
Sbjct: 94 PPLIPRV 100
>SB_44935| Best HMM Match : SAP (HMM E-Value=1.7e-09)
Length = 1487
Score = 33.1 bits (72), Expect = 0.087
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +1
Query: 25 DNVPRAPSTADHPI--LPSKIDDV--QLDPNRRYVRSVTNPENNEASIEHS-HHTVDTGL 189
+ + RA ADH I + K+D QLD N +Y++ + NP+ + ++ V
Sbjct: 229 EEIERAKVAADHLISEVKDKLDIAKEQLDDNAKYIKCLENPDEADKYVKQKIQQRVKRTA 288
Query: 190 DQPIESHR 213
+ +ESHR
Sbjct: 289 ENLVESHR 296
>SB_41062| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)
Length = 147
Score = 31.5 bits (68), Expect = 0.27
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 27 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 140
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 6 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 43
Score = 31.5 bits (68), Expect = 0.27
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 27 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 140
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 62 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 99
>SB_6685| Best HMM Match : zf-C2H2 (HMM E-Value=2.4e-31)
Length = 147
Score = 31.5 bits (68), Expect = 0.27
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 27 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 140
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 6 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 43
Score = 31.5 bits (68), Expect = 0.27
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 27 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK 140
QC+ C KY R S S ++R + KP C +C + K
Sbjct: 62 QCNECGKYFRYSRSMKSHQRIHSEEKPYQCVECDKFYK 99
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 27 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQC 125
QCS+C+K S S + R + KP +CS C
Sbjct: 762 QCSTCSKSYSTSRSLVRHERSHSSEKPYLCSDC 794
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 0.81
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 204 EPP*HKGPAVFVPSRETPVP-TLPPFNPKP 290
EPP P+VF PS P P T PP P P
Sbjct: 536 EPPPAPPPSVFAPSSGVPTPVTAPPPAPPP 565
Score = 27.1 bits (57), Expect = 5.7
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 207 PP*HKGPAVFVPSRETPVP-TLPPFNPKP 290
PP P+VF PS P P T PP P P
Sbjct: 515 PPAAPPPSVFAPSSGVPTPVTEPPPAPPP 543
>SB_44218| Best HMM Match : rve (HMM E-Value=1.5e-12)
Length = 507
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 187 LDQPIESHRNTRDLRFLYPRGKLLFQRFLRLT-PSQYILIWETVTDDMRRRIK 342
L + + +RNT+ F Y ++LF R +R T P + TV DD+R +++
Sbjct: 335 LHEGLMVYRNTQVSNFPYSPNQMLFSRKVRTTLPMHPRALLPTVHDDIRIQLQ 387
>SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13)
Length = 975
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 187 LDQPIESHRNTRDLRFLYPRGKLLFQRFLRLT-PSQYILIWETVTDDMRRRIK 342
L + + +RNT+ F Y ++LF R +R T P + TV DD+R +++
Sbjct: 803 LHEGLMVYRNTQVSNFPYSPNQMLFSRQVRTTLPMHPRALLPTVHDDIRIQLQ 855
>SB_19358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 80 STTCSSIQTEGMFAVSPIQK 139
STTCS++ T G +A++P +K
Sbjct: 89 STTCSAVTTVGGYAITPFRK 108
>SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12)
Length = 1358
Score = 28.3 bits (60), Expect = 2.5
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 187 LDQPIESHRNTRDLRFLYPRGKLLFQRFLRLT-PSQYILIWETVTDDMRRRIK 342
L + + +RNT+ F Y ++LF R +R T P + TV DD+R +++
Sbjct: 1186 LHEGLMVYRNTQVSNFPYSPNQMLFSRQVRTTLPMHPRALLPTVHDDIRIQLQ 1238
>SB_48760| Best HMM Match : bZIP_1 (HMM E-Value=0.95)
Length = 221
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 91 QLDPNRRYVRSVTNPENNEASIEHS-HHTVDTGLDQPIESHR 213
QLD N +Y++ + NP+ + ++ V + +ESHR
Sbjct: 134 QLDDNAKYIKCLENPDEADKYVKQKIQQRVKRTAENLVESHR 175
>SB_35622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 91 QLDPNRRYVRSVTNPENNEASIEHS-HHTVDTGLDQPIESHR 213
QLD N +Y++ + NP+ + ++ V + +ESHR
Sbjct: 134 QLDDNAKYIKCLENPDEADKYVKQKIQQRVKRTAENLVESHR 175
>SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
Length = 1413
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Frame = +2
Query: 74 RKSTTCSSIQTEGMFAVSPIQKITRRP--LNTHIIQLILDLTSRSRATVTQGTCGF---- 235
RK++T SS + A P + P L I+ L+L LTS + T++QG+ +
Sbjct: 297 RKASTASSHSSSFRLAKKPQHVCSNPPSCLLHSIVALLLCLTSDGQLTLSQGSANWSSAL 356
Query: 236 --CTLEG 250
C LEG
Sbjct: 357 QSCRLEG 363
>SB_25055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 27.9 bits (59), Expect = 3.3
Identities = 20/94 (21%), Positives = 43/94 (45%)
Frame = -1
Query: 380 RNQKVLIIMPQFFLILRRMSSVTVSHINIYWLGVKRRKRWNRSFPRGYKNRRSLVLRWLS 201
R+++ ++++ + + +S+V + I G K+ G +NRR+ +LR +
Sbjct: 41 RHERAIVLLDK--TRTQSLSAVAWTSTGILKRGRKKITTGRLQIQDGGRNRRAKMLRIFT 98
Query: 200 IGWSSPVSTV*CECSMDASLFSGLVTLRTYLRFG 99
P+ T C + + + +L T+L FG
Sbjct: 99 DNEERPIHTAFLACKIPCAHDNCRNSLNTFLEFG 132
>SB_22835| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 594
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 30 CSSCAKYCRPSDSSFENRRRAARSKPKVCSQC 125
C C K R S ++R+ +KP VC +C
Sbjct: 440 CEICGKGLRTKSSLRDHRKTHTDNKPFVCEEC 471
>SB_1787| Best HMM Match : Peptidase_S9 (HMM E-Value=1.5e-08)
Length = 1057
Score = 27.9 bits (59), Expect = 3.3
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 10 WLYQGDNVPRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDTG 186
+LY PR PS+A+ + ++D+ QL RR +R + I+ S + +G
Sbjct: 703 YLYASSASPRHPSSANDEVQSLRLDNAQL---RRNLRMANEKLQEQREIQQSLEELKSG 758
>SB_7903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 51 CRPSDSSFENRRRAARSKPKV 113
CRP+ +S ++ +RA R++PKV
Sbjct: 90 CRPNTTSTDDSQRAQRAQPKV 110
>SB_4770| Best HMM Match : Exo_endo_phos (HMM E-Value=0.031)
Length = 599
Score = 27.5 bits (58), Expect = 4.3
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 7/107 (6%)
Frame = +1
Query: 25 DNVPRAPSTADHPI-LPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDTGLDQ-- 195
D++P P LPS + V Y N +NEA +H T+D L Q
Sbjct: 76 DSIPETLRVIARPTRLPSSVSCVLF--GTIYHPPDANSNDNEALYQHIQETIDQCLSQHP 133
Query: 196 ----PIESHRNTRDLRFLYPRGKLLFQRFLRLTPSQYILIWETVTDD 324
I NT F KL +R LT + +L W+T T D
Sbjct: 134 ECLISISGDFNTSSTNF--SASKL--KRLCGLTQTVKVLTWDTGTLD 176
>SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 85 RRFSKEESDGLQYLAHEEHCHLDTA 11
R+FS + +DG++YLA+ H D A
Sbjct: 149 RKFSLQIADGMEYLANRHLVHRDLA 173
>SB_33309| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 646
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 27 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQC 125
+C+ C K + S E+ R + KP C+QC
Sbjct: 390 KCTQCGKAFAHASSLTEHMRTHSGEKPHKCTQC 422
>SB_19122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 27.1 bits (57), Expect = 5.7
Identities = 26/81 (32%), Positives = 33/81 (40%)
Frame = -1
Query: 284 GVKRRKRWNRSFPRGYKNRRSLVLRWLSIGWSSPVSTV*CECSMDASLFSGLVTLRTYLR 105
G + ++W R F + +R S L W +IG V DAS G TYLR
Sbjct: 250 GCRTTEKWCRRFNQKIWHRVSRTLIWTAIGGFGRVIRTELHHFADASQDDG-YGAETYLR 308
Query: 104 FGSSCTSSIFEGRIGWSAVLG 42
+ EGRI S V G
Sbjct: 309 LENK------EGRIHCSFVFG 323
>SB_426| Best HMM Match : 7tm_1 (HMM E-Value=1.1e-06)
Length = 998
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 161 CSMDASLFSGLVTLRTYLRFGSSCTSSIFEGRIG 60
C+M S++ V + +G+SC+S I +G +G
Sbjct: 191 CTMGLSVYGRDVCTMGRMSYGASCSSRIIKGSMG 224
>SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.1 bits (57), Expect = 5.7
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 109 RYVRSVTNPENNEASIEHSHHTVDTGLDQPIESHRNTRDLRFLYPRG 249
RYV + P+ + A ++ S TG D E+H R R + RG
Sbjct: 35 RYVDTHKTPDTDYAELDLSSLKARTGSDSSAETHNEERLNRHGHKRG 81
>SB_21518| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 376
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +3
Query: 30 CSSCAK-YCRPSDSSFENRRRAARSKPKVCSQC 125
C +C K +C P RR A S+P C C
Sbjct: 210 CKTCQKIFCTPHGLEVHVRRSHASSRPYSCPTC 242
>SB_16280| Best HMM Match : PA14 (HMM E-Value=0.00074)
Length = 643
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 106 RRYVRSVTNPENNEASIEHSHHTVDTGL 189
R ++++TNP NNE IE +D GL
Sbjct: 60 RDEIQNLTNPFNNEWHIEKRQPLIDMGL 87
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 306 GNRYRRHASEDQEELRHYDEHFLIPRDIF 392
GN YR D+E + D+HFL +F
Sbjct: 194 GNLYRHTTMTDEERQKLVDDHFLFRSRVF 222
>SB_59480| Best HMM Match : ZU5 (HMM E-Value=2.4e-38)
Length = 903
Score = 26.6 bits (56), Expect = 7.6
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 37 RAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDTGLDQPIESHR 213
R+P ADHP+ S+ L + +VT+ +N ++E + T D ++ E R
Sbjct: 831 RSPMPADHPVFESE-GTPTLARTEVHTTTVTDGDNTTTTVEKTVVTEDGVVETTTEPDR 888
>SB_52416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 26.6 bits (56), Expect = 7.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 278 KRRKRWNRSFPRGYKNRRSL 219
+R +W+ PRGY+NR L
Sbjct: 97 RRNGKWSSRLPRGYENREFL 116
>SB_50241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -1
Query: 401 YSWKNVPRNQKVLIIMPQFFLILRRMSSVTVSHINIYWLGVKRRKRWNRSF 249
Y +VPR++K+ + + + R + N Y L ++RR +W+RSF
Sbjct: 35 YGCSDVPRDEKLDLRKRSLYYLERYFYFIL---FNTY-LNMERRSKWDRSF 81
>SB_48962| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2225
Score = 26.6 bits (56), Expect = 7.6
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -3
Query: 375 SESAHHNAAIL-LDPPTH-VVGNGFPYQYILAWG 280
SES+ NAA++ L P +GNG PYQ+ L G
Sbjct: 1389 SESSLPNAAVIHLRPHDRDALGNGAPYQFTLISG 1422
>SB_48206| Best HMM Match : LTXXQ (HMM E-Value=3)
Length = 513
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 28 NVPRAPSTADHPILPS 75
NVPRA + A+ P+LPS
Sbjct: 473 NVPRAKTRAEQPVLPS 488
>SB_45989| Best HMM Match : TFIIE_alpha (HMM E-Value=5)
Length = 194
Score = 26.6 bits (56), Expect = 7.6
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +1
Query: 4 PLWLYQG--DNVPRAPSTADHPILPSKI-DDVQLDPNRRYVRSVTNPEN 141
P Y+G D + +AP H ++ SK+ D++ DPN + ++S+ P N
Sbjct: 112 PRTSYEGACDLLGKAPLEVHHGLICSKLFDEIVSDPNHK-LKSLLPPSN 159
>SB_21742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -1
Query: 299 NIYWLGVKRRKRWNRSFPRGYKNRRSLVLRWLSIGWSSPVSTV 171
++ +L + +RW+ RG++ +R L+ + + I +SS S V
Sbjct: 55 SVKYLSFRLERRWSLKPCRGWEQKRKLLSKIVFIDYSSNKSVV 97
>SB_15879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 27 QCSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQS 134
+C C K S + E+ RR + KP C +C +S
Sbjct: 154 RCDHCGKCFTHSGNLKEHIRRHSGEKPYKCDECGKS 189
>SB_30109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = -1
Query: 299 NIYWLGVKRRKRWNRSFPRGYKNRRSLVLRWLSIGWSSPVSTV 171
++ +L + +RW+ RG++ +R L+ + + I +SS S V
Sbjct: 15 SVKYLSFRLERRWSLKPCRGWEQKRKLLSKIVFIDYSSNKSVV 57
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 115 VRSVTNPENNEASIEHSHHTVDTGLD 192
+R++ N +N ++HS H DTGL+
Sbjct: 1775 IRTLKNQISNLNVLQHSSHQADTGLE 1800
>SB_57115| Best HMM Match : HALZ (HMM E-Value=7.6)
Length = 209
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 270 EALEQEFPSRVQKPQVPCVTVALDRLVKSSINCMM*VFN 154
E +E++ + KP+ C + LD+L+K +IN + FN
Sbjct: 160 EVMEKDSKEDMHKPRGECKGIGLDKLIK-AINDIGITFN 197
>SB_56062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 270 EALEQEFPSRVQKPQVPCVTVALDRLVKSSINCMM*VFN 154
E +E++ + KP+ C + LD+L+K +IN + FN
Sbjct: 560 EVMEKDSKEDMHKPRGECKGIGLDKLIK-AINDIGITFN 597
>SB_51124| Best HMM Match : DUF1106 (HMM E-Value=7)
Length = 305
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 270 EALEQEFPSRVQKPQVPCVTVALDRLVKSSINCMM*VFN 154
E +E++ + KP+ C + LD+L+K +IN + FN
Sbjct: 56 EVMEKDSKEDMHKPRGECKGIGLDKLIK-AINDIGITFN 93
>SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)
Length = 242
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 192 PADREPP*HKGPAVFVPSRETPVPTLPPFNPKP 290
P PP H GP P R T P P+P
Sbjct: 33 PTTPSPPSHHGPISLRPHRPTIPSPHDPITPRP 65
>SB_20469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 97 DPNRRYVRSVTNPENNEASIEHSHHTVDTGL 189
D + + RS + EN++ + SHHT+ T L
Sbjct: 416 DDDEKLKRSHSQIENSKQTSPSSHHTISTSL 446
>SB_58143| Best HMM Match : RCSD (HMM E-Value=5.9)
Length = 111
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 37 RAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDTGLDQPIESHR 213
R+P ADHP+ S+ L + +VT+ +N ++E + T D ++ E+ +
Sbjct: 9 RSPMPADHPVFESE-GTPTLARTEVHTTTVTDGDNTTTTVEKTVVTEDGVVETTTETRQ 66
>SB_56158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 26.2 bits (55), Expect = 10.0
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 195 ADREPP*HKGPAVFVPSRETPVPTLPPFNPKPIYIDMGNRYRRHASEDQEELRHYDEHFL 374
A+++P K PA P+ + P P +P+ + RRH S +++ R+ L
Sbjct: 92 AEKKP---KKPAAKKPAAKKPAAKSPQQSPR-----RSRQRRRHQSLPRKQQRNPLPKNL 143
Query: 375 IPRDIFPR 398
+P+++ PR
Sbjct: 144 LPKNLLPR 151
>SB_52927| Best HMM Match : RCSD (HMM E-Value=5.9)
Length = 111
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +1
Query: 37 RAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDTGLDQPIESHR 213
R+P ADHP+ S+ L + +VT+ +N ++E + T D ++ E+ +
Sbjct: 9 RSPMPADHPVFESE-GTPTLARTEVHTTTVTDGDNTTTTVEKTVVTEDGVVETTTETRQ 66
>SB_49711| Best HMM Match : SWIM (HMM E-Value=0.068)
Length = 245
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 97 DPNRRYVRSVTNPENNEASIEHSHHTVDTGL 189
D + + RS + EN++ + SHHT+ T L
Sbjct: 110 DDDEKLKRSHSQIENSKQTSPSSHHTISTSL 140
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 26.2 bits (55), Expect = 10.0
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1
Query: 124 VTNPENNEASIEHSHHTVDTGLDQPIESHRNTRDLRFLYPRGKLLFQR 267
VT P A+ DTG D P R TR+ R LY R + + R
Sbjct: 101 VTQPLTINATKLRIPFETDTGFDIPKALRRRTRNPRELYGRHRRYYIR 148
>SB_39539| Best HMM Match : VWA (HMM E-Value=1.8e-12)
Length = 515
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = -3
Query: 252 FPSRVQKPQVPCVTVALDRLVKSSINCM---M*VFNGRLVIFWIGDTANIPSVWIELH 88
F +KP + VT +DRL+ +C + + R ++F G N+P V I ++
Sbjct: 369 FRQFTKKPVLMAVTKLMDRLLPQPAHCFTYGKMLDHTRRILFGGGSRRNVPKVLIAIN 426
>SB_32642| Best HMM Match : IL10 (HMM E-Value=2.5)
Length = 544
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 270 EALEQEFPSRVQKPQVPCVTVALDRLVKSSINCMM*VFN 154
E +E++ + KP+ C + LD+L+K +IN + FN
Sbjct: 295 EVMEKDSKEDMHKPRGECKGIGLDKLIK-AINDIGITFN 332
>SB_27408| Best HMM Match : Methyltransf_7 (HMM E-Value=0.14)
Length = 238
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +1
Query: 106 RRYVRSVT-NPENNEASIEHSHHTVD 180
RRY R V NPEN+ A + H H ++
Sbjct: 210 RRYEREVEKNPENHFADLVHCHMLIE 235
>SB_26161| Best HMM Match : Herpes_LP (HMM E-Value=1.7)
Length = 412
Score = 26.2 bits (55), Expect = 10.0
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +3
Query: 171 YS*YWT*PADREPP*HKGPAVFVPSRETPVPTLPPFNPK 287
Y YW +D P P PSR P PTLPPF K
Sbjct: 116 YEAYWKCMSDNRPKPSYRPR---PSR--PKPTLPPFAQK 149
Score = 26.2 bits (55), Expect = 10.0
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +3
Query: 171 YS*YWT*PADREPP*HKGPAVFVPSRETPVPTLPPFNPK 287
Y YW +D P P PSR P PTLPPF K
Sbjct: 226 YKAYWKCMSDNRPKPSYRPR---PSR--PKPTLPPFAQK 259
>SB_23193| Best HMM Match : Lipoprotein_17 (HMM E-Value=2.3)
Length = 711
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 270 EALEQEFPSRVQKPQVPCVTVALDRLVKSSINCMM*VFN 154
E +E++ + KP+ C + LD+L+K +IN + FN
Sbjct: 560 EVMEKDSKEDMHKPRGECKGIGLDKLIK-AINDIGITFN 597
>SB_22048| Best HMM Match : RHS_repeat (HMM E-Value=0.00058)
Length = 820
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 270 PPFNPKPIYIDMGNRYRRHASEDQEELRHYDEHFLIPRDIFPRI 401
P NP+P Y GN+ R+ + + R+Y R +F R+
Sbjct: 573 PSGNPQPKYYPSGNQQPRYYTSGNPQSRYYPSGNPQLRLVFKRV 616
>SB_20769| Best HMM Match : Exo_endo_phos (HMM E-Value=0.022)
Length = 396
Score = 26.2 bits (55), Expect = 10.0
Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 22 GDNVPRAPSTADHPILPSKIDDVQLDPN-RRYVRSVTNPENNEASIEHSHHTVDTGLDQP 198
G ++ A T DH +L + V LD + + + S P N+ S+ + + + P
Sbjct: 263 GHDLSAAFDTVDHGLLEKALGRVGLDMHPTKVLASTLKPNNSTGSLTNLKSNKERKAESP 322
Query: 199 IESHRNTRDLRFLYPRGKLLFQ 264
+ R+ R + +LL Q
Sbjct: 323 LSIKRSKYHTRERDQQTQLLTQ 344
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 103 NRRYVRSVTNPENNEASIEHSHHTVDTGLDQPIESHRNTRDLRFL 237
N+RY + E ++ I+H H + L I +H NT L +
Sbjct: 211 NKRYTDKASIDETDQG-IKHLHFFTTSHLPYSISNHNNTNGLTLM 254
>SB_15149| Best HMM Match : HALZ (HMM E-Value=7.6)
Length = 328
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 270 EALEQEFPSRVQKPQVPCVTVALDRLVKSSINCMM*VFN 154
E +E++ + KP+ C + LD+L+K +IN + FN
Sbjct: 160 EVMEKDSKEDMHKPRGECKGIGLDKLIK-AINDIGITFN 197
>SB_4000| Best HMM Match : Pkinase_Tyr (HMM E-Value=1.2e-09)
Length = 177
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 112 TFGLDRAARRRFSKEESDGLQYLAHEEHCHLDTA 11
T L RA + R +++ + G+ YLA ++ H D A
Sbjct: 90 TCSLPRAEKLRIARDVACGMAYLAEKKCVHRDLA 123
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,540,247
Number of Sequences: 59808
Number of extensions: 336855
Number of successful extensions: 1434
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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