Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0339
(401 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 31 0.31
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 30 0.71
U46671-2|AAA85748.1| 205|Caenorhabditis elegans Hypothetical pr... 29 0.94
AF024499-6|AAB70354.1| 560|Caenorhabditis elegans Hypothetical ... 29 0.94
U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein ... 28 2.9
AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinas... 28 2.9
Z81051-9|CAD21703.1| 531|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 27 5.0
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 27 5.0
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 27 5.0
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 27 5.0
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 27 5.0
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 27 5.0
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 27 5.0
U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defecti... 27 6.7
U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defecti... 27 6.7
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 27 6.7
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 27 6.7
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 27 6.7
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 27 6.7
AF045644-7|AAC02603.1| 262|Caenorhabditis elegans Mechanosensor... 27 6.7
AC025715-4|AAP13754.1| 301|Caenorhabditis elegans Hypothetical ... 27 6.7
U61948-4|AAB03146.1| 316|Caenorhabditis elegans Hypothetical pr... 26 8.8
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 26 8.8
AF016450-12|AAB65989.1| 278|Caenorhabditis elegans Hypothetical... 26 8.8
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 26 8.8
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
protein C09F9.2 protein.
Length = 1642
Score = 31.1 bits (67), Expect = 0.31
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = -1
Query: 278 KRRKRWNRSFPRGYKNRRSLVLR-----WLSIGWSSPVSTV*CECSMDASLFSGLVTLRT 114
KR + N+ + R K+ VLR W+++GW SP +T C + A F+G + T
Sbjct: 237 KREDQGNKIYWRLLKDEIEFVLRYPGQSWIAVGWKSPEAT----CDLSAGDFAGR-NVAT 291
Query: 113 YLRFGSSCTSSI 78
SS SSI
Sbjct: 292 TSSSPSSTISSI 303
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 29.9 bits (64), Expect = 0.71
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +3
Query: 225 PAVFVPSRETPVPTLPPFNPKPIYIDMGNRYRRHASEDQEELRHYDEHFL 374
P V P R P+P P K I + R R A E++E RH FL
Sbjct: 1995 PTVTAPKRSDPIPIAPSQRSKEIEEE---RIRTEALEEEEFYRHGHNPFL 2041
>U46671-2|AAA85748.1| 205|Caenorhabditis elegans Hypothetical
protein C14E2.3 protein.
Length = 205
Score = 29.5 bits (63), Expect = 0.94
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 195 ADREPP*HKGPAVFVPSRETPVPTLPPFNPKPIYI 299
A++EPP K + V +P PT PP PKP ++
Sbjct: 129 AEQEPP-QKTQSTSVLPNVSPFPTPPPVPPKPTHL 162
>AF024499-6|AAB70354.1| 560|Caenorhabditis elegans Hypothetical
protein F42G2.2 protein.
Length = 560
Score = 29.5 bits (63), Expect = 0.94
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +1
Query: 121 SVTNPENNEASIEHSHHTVDTGLDQPIESHRNTRDLRFLYPRGKLLFQRFLRLTPSQYIL 300
++T N SI H ++ G ++ RN +D+ + F+ F S YI
Sbjct: 158 TLTELNINIHSIIHKPEIIEFGDIVEMDQWRNAKDIHLRNFFVSIPFEHFSHCE-SAYIE 216
Query: 301 IWETVTDDMRRRIK 342
+W+ DD+++ IK
Sbjct: 217 VWKISADDIQKLIK 230
>U23139-8|AAK31491.2| 1051|Caenorhabditis elegans Biotin protein
ligase protein 1,isoform a protein.
Length = 1051
Score = 27.9 bits (59), Expect = 2.9
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 28 NVPRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDTGLDQ 195
N+ +PS HP PS + RR RS +PE+ E+ E S T+++G ++
Sbjct: 91 NLDMSPSRR-HPGRPSSSATISNSARRRRYRSCNSPEHLES--ESSQLTLESGSEE 143
>AF026213-9|AAB71302.2| 615|Caenorhabditis elegans Protein kinase
protein 9, isoform b protein.
Length = 615
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 243 SRETPVPTLPPFNP-KPIYIDMGNRYRRHASE 335
S+ P PTLPP +P P+Y D +H+SE
Sbjct: 135 SQYAPYPTLPPEHPTTPLYYDPYYGGDKHSSE 166
>Z81051-9|CAD21703.1| 531|Caenorhabditis elegans Hypothetical
protein C55A6.10 protein.
Length = 531
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 336 DQEELRHYDEHFLIPRDIFPRI 401
D E L HY+ HF++P + P I
Sbjct: 490 DVESLPHYNVHFVLPSGLSPTI 511
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 27.1 bits (57), Expect = 5.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 246 RETPVPTLPPFNPKP 290
+ TP PTL PF P+P
Sbjct: 222 KPTPAPTLAPFRPRP 236
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 27.1 bits (57), Expect = 5.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 246 RETPVPTLPPFNPKP 290
+ TP PTL PF P+P
Sbjct: 220 KPTPAPTLAPFRPRP 234
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 124 HCEHTFGLDRAARRRFSKEESDGLQYLAHEEHCHLDTAIAV 2
H EH +D+ +R+ + S L +H E C I V
Sbjct: 353 HVEHGISMDQLRKRKTLNQSSTDLSAKSHNEDCVCPECIPV 393
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 124 HCEHTFGLDRAARRRFSKEESDGLQYLAHEEHCHLDTAIAV 2
H EH +D+ +R+ + S L +H E C I V
Sbjct: 353 HVEHGISMDQLRKRKTLNQSSTDLSAKSHNEDCVCPECIPV 393
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 124 HCEHTFGLDRAARRRFSKEESDGLQYLAHEEHCHLDTAIAV 2
H EH +D+ +R+ + S L +H E C I V
Sbjct: 353 HVEHGISMDQLRKRKTLNQSSTDLSAKSHNEDCVCPECIPV 393
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 124 HCEHTFGLDRAARRRFSKEESDGLQYLAHEEHCHLDTAIAV 2
H EH +D+ +R+ + S L +H E C I V
Sbjct: 353 HVEHGISMDQLRKRKTLNQSSTDLSAKSHNEDCVCPECIPV 393
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 30 CSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQS 134
C C K+ + E+ R+ KP VCS C+ S
Sbjct: 73 CVQCNKHIKYPSKITEHIRKHTGEKPNVCSICNIS 107
>U41039-4|AAL11489.1| 452|Caenorhabditis elegans Synapse defective
protein 9, isoformd protein.
Length = 452
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 30 CSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK*RG 149
C +C K R + E+R KP VC C +S + +G
Sbjct: 67 CETCGKAFRFRSNLAEHRSVHTALKPYVCKFCGKSSRLKG 106
>U41039-3|AAK68627.2| 537|Caenorhabditis elegans Synapse defective
protein 9, isoformc protein.
Length = 537
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 30 CSSCAKYCRPSDSSFENRRRAARSKPKVCSQCHQSRK*RG 149
C +C K R + E+R KP VC C +S + +G
Sbjct: 50 CETCGKAFRFRSNLAEHRSVHTALKPYVCKFCGKSSRLKG 89
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 309 FPYQYILAWG*TEEALEQEFPSRVQKPQVPCVTVALDR 196
F Y LA G E+++E+EF +QK + V A D+
Sbjct: 208 FAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDK 245
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 249 ETPVPTLPPFNPKPIYIDMGNRYRRHASEDQEELRH 356
+ P P LP F+ + IY D G+ D+EEL H
Sbjct: 150 DQPNPVLPTFSIQDIYGDFGDNVL--PEFDEEELNH 183
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 309 FPYQYILAWG*TEEALEQEFPSRVQKPQVPCVTVALDR 196
F Y LA G E+++E+EF +QK + V A D+
Sbjct: 208 FAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDK 245
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 26.6 bits (56), Expect = 6.7
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 192 PADREPP*HKGPAVFVPSRETPVPTLPPFNPKPI-YIDMGNRYRRHASEDQEELRHYDEH 368
P REP + P RE P PP P+P+ ++ + R+ SE E R Y E+
Sbjct: 550 PPPREPTPREPTPEPEPVREPTPPPPPPAKPRPLTAAEIAAQKRKAYSE--EAWRRYQEY 607
>AF045644-7|AAC02603.1| 262|Caenorhabditis elegans Mechanosensory
abnormality protein17 protein.
Length = 262
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 249 PSRVQKPQVPCVTVALDRLVKSSINCM 169
P RV++ Q P V A+D L K S +C+
Sbjct: 20 PMRVKQLQDPIVYEAIDNLAKLSAHCL 46
>AC025715-4|AAP13754.1| 301|Caenorhabditis elegans Hypothetical
protein Y38F2AR.13 protein.
Length = 301
Score = 26.6 bits (56), Expect = 6.7
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 81 RRRAARSKPKVCSQCHQSRK*RGV 152
+ ++A+ PK+CS+ Q+RK G+
Sbjct: 228 KEKSAKKSPKICSENLQNRKKNGI 251
>U61948-4|AAB03146.1| 316|Caenorhabditis elegans Hypothetical
protein C46A5.6 protein.
Length = 316
Score = 26.2 bits (55), Expect = 8.8
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +1
Query: 31 VPRAPSTADHPILPSKIDDVQLDPNRRYVRSVTNPENNEASIEHSHHTVDTGLDQPIESH 210
+ +P D P+ S DD + N + E N+AS + + + PIE+
Sbjct: 158 ITESPKNRDFPLFFSSFDDTTVLFNTTIAGDIDVNERNQASGDWIFRKDKSPTNDPIEND 217
Query: 211 RNT 219
+ T
Sbjct: 218 QET 220
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 26.2 bits (55), Expect = 8.8
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = +3
Query: 27 QCSSCAKY----CRPSDSSFENRRRAARSKPKVCSQCHQS 134
+C CAK+ C+ D NR+ PK C C+++
Sbjct: 562 KCEKCAKHPHHHCKCEDQKEFNRKIVRALCPKTCDICNET 601
>AF016450-12|AAB65989.1| 278|Caenorhabditis elegans Hypothetical
protein B0238.10 protein.
Length = 278
Score = 26.2 bits (55), Expect = 8.8
Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -2
Query: 208 GSRSA-GQVQYQLYDVSVQWTPRYFLDW*HCEHTFGLDRAARRRFSKEESDGLQYLAHEE 32
GSRSA + + D++++ + W HC+H D A R + S ++ +A+++
Sbjct: 45 GSRSAKNSISEESNDLTMEESVPEASKWPHCQHMISQDEAPRN--DELASPNIRIVAYKD 102
Query: 31 HCHLD 17
++
Sbjct: 103 ESQIN 107
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 219 KGPAVFVPSRETPVPTLPPFNPKPIYI 299
K PA + P+ E P +PP P P I
Sbjct: 439 KSPATYGPAPEPSRPAVPPVAPAPSVI 465
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,695,549
Number of Sequences: 27780
Number of extensions: 251290
Number of successful extensions: 1063
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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