Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0336
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   3.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.1  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 327 HHQAGVHIHLRYQI 286
           HH AG HIH ++ +
Sbjct: 323 HHHAGHHIHAQHHV 336


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 570 HKTVNTHTLHSYIQVYKIRRVFDG 499
           ++ +   T  +Y+ V  IRRV DG
Sbjct: 240 YRGIMLDTARNYMSVESIRRVLDG 263


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +2

Query: 5   VLFLPIYYLF*M---IINLIF*SCPTITVLIVMI 97
           ++F+P Y  F     I+ LIF  CP +T  I+ I
Sbjct: 139 LVFVPDYVFFVENEPILYLIFSYCPIVTTGIIKI 172


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -3

Query: 422 DVFLRSEMNYAHMDSLKFFELRWDW 348
           D F+RS +++ +      F+L W++
Sbjct: 122 DAFIRSVISFMNQYEFDGFDLDWEY 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,411
Number of Sequences: 336
Number of extensions: 3778
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)