Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0336
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78065-5|CAB01515.1|  954|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p...    28   5.1  
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p...    28   5.1  
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p...    28   5.1  
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr...    28   5.1  
U29244-2|AAC71086.1|  334|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z81465-3|CAC42253.4|  800|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z78065-5|CAB01515.1|  954|Caenorhabditis elegans Hypothetical
           protein T09E8.2 protein.
          Length = 954

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 514 KGVRWQEALH*NEEGYISRVLNCYRGGSSHLTC 416
           K +RW E L    E Y +R+L+  RGG +   C
Sbjct: 232 KRLRWIEQLASGNETYKNRLLHALRGGVTQFLC 264


>U55372-2|AAA98001.1|  980|Caenorhabditis elegans Hypothetical
           protein C02G6.1 protein.
          Length = 980

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 202 TGKIKTFCREKGHGFVKPKKGAKIYFSIYLISKVNMYPCLVMKLYIDFAQSHLSSKNF 375
           TG  KT   E     V+P+     ++  +  S + M  C++ K  +D  QSHL +  F
Sbjct: 182 TGNKKTLLEEARKKGVEPRDALLQFYKKWYSSNI-MTCCIIGKESLDVLQSHLKTLEF 238


>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
            F07A11.6e protein.
          Length = 2101

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 94   DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
            DS   TN  L LP+  I R + TASTS      PL+
Sbjct: 1851 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 1886


>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
            F07A11.6c protein.
          Length = 2392

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 94   DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
            DS   TN  L LP+  I R + TASTS      PL+
Sbjct: 2142 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 2177


>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
            F07A11.6b protein.
          Length = 2407

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 94   DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
            DS   TN  L LP+  I R + TASTS      PL+
Sbjct: 2157 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 2192


>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
            F07A11.6a protein.
          Length = 2211

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 94   DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
            DS   TN  L LP+  I R + TASTS      PL+
Sbjct: 1961 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 1996


>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
            protein F07A11.6e protein.
          Length = 2101

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 94   DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
            DS   TN  L LP+  I R + TASTS      PL+
Sbjct: 1851 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 1886


>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
            protein F07A11.6c protein.
          Length = 2392

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 94   DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
            DS   TN  L LP+  I R + TASTS      PL+
Sbjct: 2142 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 2177


>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
            protein F07A11.6b protein.
          Length = 2407

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 94   DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
            DS   TN  L LP+  I R + TASTS      PL+
Sbjct: 2157 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 2192


>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
            F07A11.6a protein.
          Length = 2211

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +1

Query: 94   DSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLE 201
            DS   TN  L LP+  I R + TASTS      PL+
Sbjct: 1961 DSIGATNGVLHLPTQSIQRPSSTASTSSNPPKAPLQ 1996


>U29244-2|AAC71086.1|  334|Caenorhabditis elegans Hypothetical
           protein ZK1248.5 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = -1

Query: 655 ISKITILKLKVTWGIDYYQK*VFFYYDSAQDCQHTHITFLHSSL*DKKGV 506
           + K  I K K  WG DY+Q   F          ++H+ F    L D KG+
Sbjct: 50  LKKDDIKKFKEAWGNDYHQTLTFLKDSDRLIASNSHVVF--RPLKDSKGL 97


>AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical
           protein Y39E4B.10 protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 20/91 (21%), Positives = 38/91 (41%)
 Frame = -3

Query: 443 QRWFVPLDVFLRSEMNYAHMDSLKFFELRWDWAKSIYNFITRQGYIFTFDIRYMEKYIFA 264
           Q++ + L++F +   NY H+  ++FF   +   K +     ++   F      +EK IF+
Sbjct: 302 QKFLIFLNIFKK---NYYHIRKIRFFNFFYISKKILTKKFFKKNLFFFLIFNNLEKSIFS 358

Query: 263 PFFGFTNP*PFSLQNVLILPVSNGLPKALSD 171
            F        FS   +    + N    A+ D
Sbjct: 359 NFKKSNTFFQFSKNKIFNFLIKNLYTNAICD 389


>Z81465-3|CAC42253.4|  800|Caenorhabditis elegans Hypothetical
           protein C09F9.3 protein.
          Length = 800

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = -2

Query: 597 SRFFFIMIVHKTVNTHTLHSYIQVYKIRRVFDGKRPCIKTKKVTY-----LGFLIVTEVV 433
           S+ F   IV   + +H LH Y+      R+F+    C+ +  + +      G ++VT ++
Sbjct: 229 SKAFNYAIVASEIGSHVLHQYVGHEPSGRLFN--EICLDSNNMPHNPLINAGAIVVTSMI 286

Query: 432 RPT 424
           +PT
Sbjct: 287 KPT 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,460,154
Number of Sequences: 27780
Number of extensions: 347907
Number of successful extensions: 935
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)