Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0331
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   4.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   7.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.7  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 352 VVFHKVVCLLPVISFLLVYVNFIIVW*ECNLTSSLF 245
           V  H  V L     +++VY+  +I W   N ++++F
Sbjct: 242 VYLHLAVMLGFQDIYMIVYIIVVIFWYTVNASTNIF 277


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 352 VVFHKVVCLLPVISFLLVYVNFIIVW*ECNLTSSLF 245
           V  H  V L     +++VY+  +I W   N ++++F
Sbjct: 242 VYLHLAVMLGFQDIYMIVYIIVVIFWYTVNASTNIF 277


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = -2

Query: 514 ETFHASRCSVDTQKNKSSCPFPIISLSPDVSITVN 410
           E F + +CS+ ++   +   FP+     D    +N
Sbjct: 346 EHFFSVKCSIQSESLLNDILFPVAGFISDFDCDIN 380


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 511 TFHASRCSVDTQKNKSSCPFPI 446
           T   S C+  T KN  + P+P+
Sbjct: 249 TVQLSTCTRTTLKNNRASPYPM 270


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 55  YYSSKLEDLFLVQFC 11
           Y  SK+  + L+QFC
Sbjct: 171 YTLSKMSQVMLIQFC 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,903
Number of Sequences: 336
Number of extensions: 3797
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)