Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0327
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.75 
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   1.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   3.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   5.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.3  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 430 ESLPSAGGRAARGVYCVYRALRRCDS 507
           E LP+A G+A+ G  C    LR C S
Sbjct: 175 EDLPAAAGKASNGNKCC--CLRTCSS 198


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 512 CGESHLRKARYTQ 474
           C  S LRKARYT+
Sbjct: 62  CSNSPLRKARYTE 74


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 33  RQAIELNPPHLSWYQLTIEPNTLFGS 110
           R   E  PP + +Y  T+E  T+ G+
Sbjct: 110 RACREGEPPRICYYHFTLELYTVLGA 135


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 33  RQAIELNPPHLSWYQLTIEPNTLFGS 110
           R   E  PP + +Y  T+E  T+ G+
Sbjct: 110 RACREGEPPRICYYHFTLELYTVLGA 135


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 318 PSGKVTLPCAPQPIPM*SP 262
           P     +P AP+P P+ SP
Sbjct: 80  PEPDPEIPVAPEPAPLASP 98


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 13/47 (27%), Positives = 18/47 (38%)
 Frame = +3

Query: 57  PHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQ 197
           P+ SW   T+   T  G         +A WD+   G  L  + G  Q
Sbjct: 161 PYESWPFNTMSGATHHGGIKSDSVTSNAWWDVHSTGSWLDMSGGMHQ 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,540
Number of Sequences: 336
Number of extensions: 4060
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)