Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0327
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         24   3.8  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   5.1  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   6.7  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   8.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   8.9  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   8.9  

>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 261 KRRS*DCAGTDNRVWRKRKFHI 196
           +RR+ DC G  N    K+KF++
Sbjct: 166 RRRALDCTGAPNEQCCKQKFYV 187


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -1

Query: 183 LRLITDAPVRIYPTTRHRPAAPVVANQTAYWVRWSVDTRKDAADSVQWPG 34
           LRLITD   R +    HR A   +        R  +D   D A+  ++ G
Sbjct: 323 LRLITDLQERSFVAADHRTAKRNLEKAIRASKRQQIDALIDTAEDNEFGG 372


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 329  RTTKTRHPR-GFMQGRYLESQRDVEATDKP 415
            RTT+ R  R  +MQ +Y   +RD E  D P
Sbjct: 1121 RTTEMRRRRRNYMQLQYRRRRRDGELGDVP 1150


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 33  RQAIELNPPHLSWYQLTIEPNTLFGS 110
           R   E  PP + +Y  T+E  T+ G+
Sbjct: 153 RACREGEPPRICYYHFTVEYYTVLGA 178


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 33  RQAIELNPPHLSWYQLTIEPNTLFGS 110
           R   E  PP + +Y  T+E  T+ G+
Sbjct: 153 RACREGEPPRICYYHFTVEYYTVLGA 178


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 417 NGLSVASTSRWLSRYLPCIKP 355
           +GLS+   + W+  Y  C+ P
Sbjct: 518 DGLSMQCVASWIFLYFACLSP 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,391
Number of Sequences: 2352
Number of extensions: 17897
Number of successful extensions: 43
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)