Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0327
         (678 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22179-2|CAA80168.1|  159|Caenorhabditis elegans Hypothetical pr...    31   0.76 
Z75951-1|CAB00091.2|  408|Caenorhabditis elegans Hypothetical pr...    30   1.3  
U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain (pr...    28   7.0  
Z83226-4|CAI79261.2|  206|Caenorhabditis elegans Hypothetical pr...    27   9.3  
Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical...    27   9.3  

>Z22179-2|CAA80168.1|  159|Caenorhabditis elegans Hypothetical
           protein F58A4.2 protein.
          Length = 159

 Score = 31.1 bits (67), Expect = 0.76
 Identities = 21/69 (30%), Positives = 32/69 (46%)
 Frame = -3

Query: 667 GWIRRSRRIRQYKFTQPEKAPAANLKTVSHVPLSASNPQIR*DNPGQSPRLTVANHIFAK 488
           G++ R  R   + F   +K P +++  V    L  S P      P QS   +   +IF  
Sbjct: 76  GFVERKNRAASFDFCLSDK-PQSDV-VVHRRSLQPSTP-----TPNQSAESSFIENIFDS 128

Query: 487 PGIRNKLHA 461
           PG RN+LH+
Sbjct: 129 PGQRNRLHS 137


>Z75951-1|CAB00091.2|  408|Caenorhabditis elegans Hypothetical
           protein F14A5.1 protein.
          Length = 408

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 635 IQVYSARKSSSSEF-KNSFPCSVICQ*SANSVR*PWAIASSNCGESHLRKARYTQ*T 468
           ++VY+  K+ +S F KNS PC V CQ SA S R  + I S     S  R+    Q T
Sbjct: 40  LKVYNYIKTKASNFTKNSEPCQV-CQDSA-STRHHFGITSCTACASFFRRTTMNQFT 94


>U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 7 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 9   LEEALGDLRQAIELNPPHLSWY 74
           LEE+L  +R+ ++LNP H S Y
Sbjct: 224 LEESLNVIRECLKLNPDHKSCY 245


>Z83226-4|CAI79261.2|  206|Caenorhabditis elegans Hypothetical
           protein F43D2.6 protein.
          Length = 206

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -3

Query: 469 LHARRGLQQTEAIHKE--LKRLICGFDITLAFQIPSLH 362
           LH RR  QQ E++H +     + CGF I +   + S H
Sbjct: 117 LHRRRNPQQYESVHNDNGWYPICCGFGIPMGTVVFSTH 154


>Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical
           protein C31C9.6 protein.
          Length = 965

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 54  PPHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGH 167
           PPH   Y+ T +P+T+    PP   + + L  I E  H
Sbjct: 677 PPHWDSYRWTTKPDTVPKQTPPPTHNSNVLPHIDENDH 714


>AL117204-16|CAB55130.1|  389|Caenorhabditis elegans Hypothetical
           protein Y116A8C.25 protein.
          Length = 389

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = -1

Query: 510 WRITSSQ-SPVYAINSTRGAASSRRKRFIKNSNGLSVASTS 391
           W +  SQ + ++A N  + A ++RR RF+  ++G+S  S S
Sbjct: 85  WALAGSQLAKMHAKNGEQLAQNARRTRFVSVNSGMSDISKS 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,237,308
Number of Sequences: 27780
Number of extensions: 381875
Number of successful extensions: 978
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)