Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0324
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    24   1.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.2  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.1  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +3

Query: 279 GGALCMFSKNGGPVPINKNLW 341
           GG +C++S+  GP  +   +W
Sbjct: 507 GGEVCLWSEQVGPDSLETRIW 527


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 465 EHFDQRNTEVCRPTCSSD 412
           +HFD+ +  +   +CSSD
Sbjct: 5   DHFDRESPNIDHNSCSSD 22


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 663 LFIYYWNKHFIYNVMKILFLCKKTPTANHI 574
           + + +W+  FI NV+ I   C  T   + I
Sbjct: 270 MLLTFWSAFFIVNVLYICNQCYNTVEESRI 299


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 105 KVPPRYRCAGPSSVLSMYPAIPPVQFLSEW 16
           K+   Y+  GP SV S    +   + LS W
Sbjct: 357 KLADLYKSLGPDSVYSFINNLTDRKLLSAW 386


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 105 KVPPRYRCAGPSSVLSMYPAIPPVQFLSEW 16
           K+   Y+  GP SV S    +   + LS W
Sbjct: 249 KLADLYKSLGPDSVYSFINNLTDRKLLSAW 278


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 96  VEPSRSYTAPSCLTTLRVYWASSQE 170
           V  +R   +P C+T  R  W ++ E
Sbjct: 576 VVSNRLVESPCCITMRRYGWTANME 600


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 461 CSIPLRRLRAVEASLPLHWYLEAPTHAQLLATHAGAMLIWLAVGVFL 601
           CSIP   +  VE+   + WY +  T+  +  T+A   L +L  G+ +
Sbjct: 182 CSIPQMVVFHVESHPNITWYQQCVTY-NVFPTYAHE-LTYLLFGMVM 226


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +2

Query: 461 CSIPLRRLRAVEASLPLHWYLEAPTHAQLLATHAGAMLIWLAVGVFL 601
           CSIP   +  VE+   + WY +  T+  +  T+A   L +L  G+ +
Sbjct: 182 CSIPQMVVFHVESHPNITWYQQCVTY-NVFPTYAHE-LTYLLFGMVM 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,924
Number of Sequences: 336
Number of extensions: 4032
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)