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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0324
         (668 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0065 - 40851101-40851247,40851352-40851495,40851781-408518...    50   1e-06
05_01_0406 + 3197189-3197389,3197491-3197628,3198463-3198544,319...    40   0.002
11_02_0049 - 7751779-7751925,7752046-7752189,7752398-7752489,775...    38   0.005
11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536...    38   0.007
02_04_0050 - 19245087-19245113,19245306-19245449,19245546-192456...    37   0.017
04_03_0825 - 20092781-20092801,20092844-20093079,20093166-200932...    33   0.27 
03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583...    33   0.27 
06_02_0037 - 10856616-10856915,10857527-10860238                       31   0.83 
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717           31   0.83 
06_02_0035 + 10816723-10819497,10819964-10820011                       31   1.1  
11_06_0239 + 21637451-21638098,21638172-21638714                       30   1.5  
10_07_0181 - 13884007-13884767,13885263-13885329                       30   1.5  
03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105           30   1.5  
02_02_0357 + 9360108-9360754,9363732-9364137                           29   2.5  
11_03_0176 - 11260900-11261286,11261459-11261593,11262971-112631...    29   3.3  
06_01_0410 + 2928382-2930973                                           29   3.3  
02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200,145...    29   3.3  
11_06_0610 - 25449085-25453284                                         29   4.4  
11_01_0389 - 2937242-2939476,2939556-2939666,2941254-2941450,294...    29   4.4  
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351...    29   4.4  
06_02_0019 - 10656005-10657511,10657712-10658739                       29   4.4  
10_08_0357 - 17158414-17160150,17160534-17160710                       28   5.9  
07_01_0895 + 7506460-7507929                                           28   5.9  
01_01_0555 + 4080316-4081680                                           28   5.9  
08_01_1061 - 10804269-10804352,10804464-10804593,10804696-108047...    28   7.7  
07_01_1127 + 10456895-10457388,10457488-10458112                       28   7.7  
06_02_0024 - 10714741-10716241,10716774-10717840                       28   7.7  
06_02_0016 - 10623796-10625317,10626493-10627541                       28   7.7  
05_03_0545 - 15244647-15245147,15245342-15245635                       28   7.7  
01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542...    28   7.7  

>01_07_0065 -
           40851101-40851247,40851352-40851495,40851781-40851872,
           40851954-40852035,40852127-40852193,40852284-40852375,
           40852470-40852586,40852764-40852881,40852969-40853161,
           40853258-40853339,40853607-40853744,40853829-40854023
          Length = 488

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
 Frame = +3

Query: 198 HQDHACLQPRQSKDNALDIWSIMFGVGGGALCMFSKNGGPVPINKNLWSVSYCLVTSSMA 377
           H  H  +  +   D  L  WSIM G+    L +       +P+NK L++ SY  VT+  A
Sbjct: 325 HYGHVLVHMKSHTDR-LKQWSIM-GITLLILGLTLHFSHAIPLNKQLYTFSYICVTAGAA 382

Query: 378 FFIQAVLYFIVDLKN-KWGGRPLYYAGQNALFLYV 479
             +  + YF+VD+ N  +   PL + G NA+ +YV
Sbjct: 383 GIVFCMFYFLVDILNLHYPFAPLKWTGMNAMLVYV 417


>05_01_0406 +
           3197189-3197389,3197491-3197628,3198463-3198544,
           3198658-3198734,3198829-3198935,3199367-3199505,
           3200602-3200718,3200850-3200941,3201096-3201162,
           3201249-3201355,3201468-3201546,3201751-3201894,
           3202095-3202235
          Length = 496

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = +3

Query: 324 INKNLWSVSYCLVTSSMAFFIQAVLYFIVDLKNKWGGRPLY-YAGQNALFLYV 479
           I+K L++VSY L+T  ++ F+  +LY+IVD+ N      L+ + G NAL +YV
Sbjct: 375 ISKPLYTVSYMLLTGGVSGFLLLLLYYIVDVINIKKPFILFQWMGMNALIVYV 427



 Score = 28.7 bits (61), Expect = 4.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 50  GYIDRTLLGPAHLYRGGTFK 109
           G++DR LLG  HLY+   +K
Sbjct: 265 GFVDRVLLGENHLYKNPVYK 284


>11_02_0049 -
           7751779-7751925,7752046-7752189,7752398-7752489,
           7752745-7752811,7753148-7753264,7753318-7753462,
           7753574-7753689,7753789-7753865,7753995-7754076,
           7754180-7754317,7754781-7754999
          Length = 447

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +3

Query: 300 SKNGGPVPINKNLWSVSYCLVTSSMAFFIQAVLYFIVDLKNKWGGRP----LYYAGQNAL 467
           S++   +PINK L+S+SY   T+  A  + +  Y ++D+   WG R     L + G NA+
Sbjct: 316 SRSFQAIPINKQLYSLSYVCFTAGAAGVVLSAFYILIDV---WGLRTPFLFLEWIGMNAM 372

Query: 468 FLYV 479
            ++V
Sbjct: 373 LVFV 376


>11_06_0013 -
           19252779-19252805,19252947-19253090,19253572-19253663,
           19253757-19253835,19253965-19254031,19254163-19254254,
           19254986-19255102,19255254-19255365,19255479-19255594,
           19255680-19255756,19255912-19255993,19256077-19256214,
           19258806-19259009
          Length = 448

 Score = 37.9 bits (84), Expect = 0.007
 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = +3

Query: 324 INKNLWSVSYCLVTSSMAFFIQAVLYFIVDLKN-KWGGRPLYYAGQNALFLYV 479
           +NK+L+S+SY  VT+  A      +Y +VD+K  K    P+ + G++AL ++V
Sbjct: 365 MNKSLYSLSYTCVTTGTAGLFFVAIYLLVDVKGYKRPVLPMEWMGKHALMIFV 417


>02_04_0050 -
           19245087-19245113,19245306-19245449,19245546-19245637,
           19245733-19245811,19245902-19245968,19246084-19246175,
           19246267-19246383,19246472-19246583,19246884-19246990,
           19247113-19247189,19247351-19247432,19247526-19247663,
           19248176-19248234,19249155-19249233
          Length = 423

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
 Frame = +3

Query: 297 FSKNGGPVPINKNLWSVSYCLVTSSMAFFIQAVLYFIVDLKNKWGGR----PLYYAGQNA 464
           FS +   + +NK L+++SY L TS  A  + A +Y +VD+   +G R    P+ + G++A
Sbjct: 331 FSMDFIGIRMNKPLYTISYALATSGAAGLLFAGIYTLVDV---YGFRKLTIPMEWMGKHA 387

Query: 465 LFLYV 479
           L +YV
Sbjct: 388 LMIYV 392


>04_03_0825 -
           20092781-20092801,20092844-20093079,20093166-20093244,
           20093344-20093482,20093533-20093624,20093714-20093830,
           20093930-20094041,20094154-20094260,20094351-20094427,
           20094517-20094598,20094702-20094839,20095495-20095608
          Length = 437

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +3

Query: 324 INKNLWSVSYCLVTSSMAFFIQAVLYFIVDL-KNKWGGRPLYYAGQNALFLYV 479
           +NK L++VSY L T+  A  + A +Y +VD+  ++     + + G +AL +YV
Sbjct: 356 MNKPLYTVSYALATAGAAGLLFAGIYALVDMYGHRRPTAVMEWMGTHALMIYV 408


>03_05_0712 -
           27057858-27057941,27058093-27058182,27058268-27058384,
           27059759-27059866,27060314-27060406,27060499-27060669,
           27061505-27061757,27061860-27062138,27062939-27063273,
           27063364-27064332,27064711-27065182,27065243-27065291,
           27066564-27066804,27067606-27067695,27068172-27068294,
           27068365-27068418
          Length = 1175

 Score = 32.7 bits (71), Expect = 0.27
 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
 Frame = -1

Query: 563 RRVLPVIERASAPRGTSAREVTLQQL*ADVKE*SILTSVIQRSAAPL--VLQIDDEVQHG 390
           R+V P++    + RG+SARE+T   L   V E   L S ++R+AA    + Q+     H 
Sbjct: 9   RQVPPLLHAMVSLRGSSAREITRDALLQKVSEERQLRSHLRRAAAAALSIQQLTKSANHL 68

Query: 389 LY---EERHR-*RHETVGH 345
           ++   +E HR  RH  V H
Sbjct: 69  MWPFQKEVHRVIRHVAVVH 87


>06_02_0037 - 10856616-10856915,10857527-10860238
          Length = 1003

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 149 ILGVFSGVLVVQAGLTPPGSCLPTTTPEQG*CAG 250
           ++ + +  +  QAGLTPPG   P     +G  AG
Sbjct: 759 LISILAATITYQAGLTPPGDVWPAADDGEGHAAG 792


>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
          Length = 415

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
 Frame = +2

Query: 11  GNHSLKNC-TGGIAGYIDRTLLGP-----AHLY---RGGTFKELYRTVVPHDPEGILGVF 163
           GN  LK   +GGIAG + RT + P      HL     G +  E++++++ H  EG  G+F
Sbjct: 131 GNPHLKRLISGGIAGAVSRTAVAPLETIRTHLMVGSNGNSTAEVFQSIMKH--EGWTGLF 188

Query: 164 SGVLV 178
            G  V
Sbjct: 189 RGNFV 193


>06_02_0035 + 10816723-10819497,10819964-10820011
          Length = 940

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 149 ILGVFSGVLVVQAGLTPPGSCLPT 220
           +LG+ +  +  QAGL PPGS  PT
Sbjct: 780 LLGILAASVTYQAGLVPPGSVWPT 803


>11_06_0239 + 21637451-21638098,21638172-21638714
          Length = 396

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -1

Query: 362 HETVGHRPQVLVDGHRAAVLREHAEGATADTEHY 261
           HE +GH     + GHR AV  + A  A AD   Y
Sbjct: 53  HEFLGHDLYTELPGHRFAVTADFAAAAAADASRY 86


>10_07_0181 - 13884007-13884767,13885263-13885329
          Length = 275

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = +2

Query: 65  TLLGPAHLYRGGTFKELYRTVVPHDPEGILGVFSGVLVVQAGLTPPGSCLPTTTP 229
           TLLGP  L RG TF+ + +   P  P         VL     L PPG     + P
Sbjct: 20  TLLGPVALVRGVTFRVVNKCPFPVWPAAAPNAGHPVLAGGGFLLPPGQSRRVSAP 74


>03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105
          Length = 430

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -3

Query: 252 YPAHYPCSGVVVGKHDPGGVRPACTTSTPEKTPSIPSGS*GTTVRYNSLKVPPRYRCAG 76
           +P HYP    V G+  P G++PA  T   E   +I   +    ++  +L++ P   C G
Sbjct: 118 HPQHYPGWPGVSGRPHPCGLQPAMPTPYVEHQKAITIRN-DVNLKKETLRIEPDEECPG 175


>02_02_0357 + 9360108-9360754,9363732-9364137
          Length = 350

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = +3

Query: 42  GSLDTSIERYWAPRICTEVEPSRSYTAPSCLTTLRVYWASSQECWWCRLASRHQDHACLQ 221
           G++D ++ + + P I T  +  R  T  S   TL         C+ C+    H    CLQ
Sbjct: 261 GTIDANVSKDFQPPIPTPSQNDRPQTDSSAKKTLI--------CYNCK-GPGHYSRDCLQ 311

Query: 222 PRQSK 236
           PRQS+
Sbjct: 312 PRQSR 316


>11_03_0176 -
           11260900-11261286,11261459-11261593,11262971-11263117,
           11263754-11263926,11264661-11264748,11265587-11265804,
           11266367-11266424,11267133-11267219
          Length = 430

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 337 RFLLMGTGPPFLENMQR-APPPTPNIIDQISSALS---LLWR 224
           R LL+  G PFL  + R  PPPT ++++  +  +S    LWR
Sbjct: 3   RALLLRRGHPFLRRLLRPPPPPTSSVLESCNRNVSPRVQLWR 44


>06_01_0410 + 2928382-2930973
          Length = 863

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 285 ALCMFSKNGGPVPINKNLWSVSYCL-VTSSMAFFIQAVLYFIVDLKNKW 428
           +LC+ SK    +  N + W  ++C+ +     F IQ V++    +   W
Sbjct: 519 SLCVVSKRASSLQFNADFWKSAWCVQLVFKQTFAIQKVMFSNEAIMKSW 567


>02_01_0223 +
           1453478-1453750,1455788-1456018,1456066-1456200,
           1457918-1457971,1458417-1458482,1458593-1458679,
           1459338-1459394,1459470-1459500,1459577-1459634,
           1459710-1459761,1459881-1459917,1460008-1460210,
           1460556-1460633,1460683-1460853,1461126-1461239
          Length = 548

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 228 GVVVGKHDPGGVRPACTTSTPEKTPSIPSGS 136
           G ++G +DPG    A   S PE++P+  SG+
Sbjct: 211 GCLMGTNDPGTPSKATKASEPEQSPATTSGT 241


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -3

Query: 171 TPEKTPSIPSGS*GTTVR-YNSLKVPPRYRCAGPSSVLSMYPAIPPVQFLS 22
           TPEK+PS PSG  GT      S   PP    + P    S  P  PP   +S
Sbjct: 817 TPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEKSSSP--PPEAHVS 865


>11_01_0389 -
           2937242-2939476,2939556-2939666,2941254-2941450,
           2941543-2941633
          Length = 877

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 380 LHTGRAVLHRRSEEQVGRQTSVLRWSKCSIP 472
           LH    V +  SE+ +GR T+ +    CSIP
Sbjct: 478 LHNKNLVANHLSEQNIGRNTTAVEKDCCSIP 508


>07_03_0474 +
           18534071-18534238,18534349-18534445,18534992-18535122,
           18535191-18535286,18535459-18535464,18535521-18535688,
           18535892-18536020,18536613-18536673,18536928-18537031,
           18537137-18537220,18538433-18538461,18538506-18538617,
           18539200-18539313,18539767-18539832,18540237-18540309,
           18540396-18540482,18540710-18540764,18540869-18540940,
           18541039-18541101,18541177-18541294,18541377-18541451
          Length = 635

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -3

Query: 582 NHINMAPACVASN*ACVGASRYQCKGSDASTALSRRKGIEHFDQRN 445
           N++N++PA   S+  CV A +Y   G   +  L++ + +     RN
Sbjct: 113 NYLNISPAICESSQYCVNADKYARDGPSDTYPLAKWRILNRLHDRN 158


>06_02_0019 - 10656005-10657511,10657712-10658739
          Length = 844

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 149 ILGVFSGVLVVQAGLTPPGSCLPTTTPEQG*CAG--YLVDNVRCRRWR 286
           +LG+ +  +  QAGL PPG    +     G  AG   L DN R RR+R
Sbjct: 666 LLGILAASVTYQAGLHPPGGVWQSDDDGAGHAAGNPVLRDN-RRRRYR 712


>10_08_0357 - 17158414-17160150,17160534-17160710
          Length = 637

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
 Frame = -3

Query: 264 LSTKYPAHYP--CSGVVVGKHDPGGVRPACTTSTPEKTPSIPSGS*GTTVRYNSLKVPPR 91
           + T   AH+   C  VVVG    GGV  A   S   K   +  G    T  Y SL+ P  
Sbjct: 123 VKTGTAAHHTVQCDAVVVGSGCGGGVAAAVLASKGYKVVVVEKGDYFATEDYTSLEGPSM 182

Query: 90  YR 85
            R
Sbjct: 183 ER 184


>07_01_0895 + 7506460-7507929
          Length = 489

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 122 TVVPHDPEGILGVFSGVLVVQAG 190
           TVV H PEG+LGV+  V  +  G
Sbjct: 214 TVVRHLPEGLLGVYDFVAAIAVG 236


>01_01_0555 + 4080316-4081680
          Length = 454

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +3

Query: 264 MFGVGGGALCMFSKNGGPVPINKNLWSVSYCLVTSSM 374
           + G+GGGA+ + ++ GG   + +     SYCLV  S+
Sbjct: 235 LVGLGGGAVSLVTQLGGATSLGRRF---SYCLVPHSV 268


>08_01_1061 -
           10804269-10804352,10804464-10804593,10804696-10804745,
           10805154-10805216,10806235-10806375,10806541-10806925,
           10807735-10808339
          Length = 485

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 312 GPVPINKNLWSVSYCLVTSSMAFFIQAVLYFIVDL 416
           GPVP  +  W ++  L  ++ +F I  +LY  +DL
Sbjct: 269 GPVPFWQRTWFLALLLAMAAASFAIALLLYLGLDL 303


>07_01_1127 + 10456895-10457388,10457488-10458112
          Length = 372

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +3

Query: 42  GSLDTSIERYWAPRICTEVEPSRSYTAPSCLTTLRVYWASSQECWWCRLASRHQDHACLQ 221
           G+ D ++ + + P I T  +  R  T  S   TL         C+ C+    H    CLQ
Sbjct: 283 GTTDANVSKDFQPPIPTPSQNDRPQTDSSAKKTLI--------CYNCKEPG-HYSRDCLQ 333

Query: 222 PRQSK 236
           PRQS+
Sbjct: 334 PRQSR 338


>06_02_0024 - 10714741-10716241,10716774-10717840
          Length = 855

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 149 ILGVFSGVLVVQAGLTPPGSCLPTTTPEQG*CAGYLV 259
           +  +    +  QAGLTPP  C      + G  AG+ V
Sbjct: 521 LFAILCATITYQAGLTPPSGCWQDDDKQHGYHAGHPV 557


>06_02_0016 - 10623796-10625317,10626493-10627541
          Length = 856

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = +2

Query: 149 ILGVFSGVLVVQAGLTPPGSCLPTTTPEQG*CAG--YLVDN 265
           +L +    +  QAGLTPPG        E G  AG   L+DN
Sbjct: 524 LLAILVATIAYQAGLTPPGGFWDKDDGESGHHAGVPVLLDN 564


>05_03_0545 - 15244647-15245147,15245342-15245635
          Length = 264

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 20/65 (30%), Positives = 29/65 (44%)
 Frame = +3

Query: 42  GSLDTSIERYWAPRICTEVEPSRSYTAPSCLTTLRVYWASSQECWWCRLASRHQDHACLQ 221
           G+ D ++ + + P I T  +  R  T  S   TL         C+ C+    H    CLQ
Sbjct: 175 GTTDANVSKDFQPPIPTPSQNDRPQTDSSAKKTLI--------CYNCKEPG-HYSRDCLQ 225

Query: 222 PRQSK 236
           PRQS+
Sbjct: 226 PRQSR 230


>01_05_0489 +
           22652479-22653718,22653882-22654063,22654172-22654279,
           22654364-22654467,22654570-22654657,22654760-22654870,
           22654955-22655020,22656740-22656799,22656869-22657411,
           22657646-22657765,22657845-22657964,22659083-22659136,
           22659236-22659331,22660580-22660681
          Length = 997

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 225 VVVGKHDPGGVRPACTTSTPEKTPS 151
           V +GK DP GV P    S+P   PS
Sbjct: 181 VDLGKQDPSGVSPTSGVSSPALAPS 205


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,204,498
Number of Sequences: 37544
Number of extensions: 551417
Number of successful extensions: 1869
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1867
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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