BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0324 (668 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_07_0065 - 40851101-40851247,40851352-40851495,40851781-408518... 50 1e-06 05_01_0406 + 3197189-3197389,3197491-3197628,3198463-3198544,319... 40 0.002 11_02_0049 - 7751779-7751925,7752046-7752189,7752398-7752489,775... 38 0.005 11_06_0013 - 19252779-19252805,19252947-19253090,19253572-192536... 38 0.007 02_04_0050 - 19245087-19245113,19245306-19245449,19245546-192456... 37 0.017 04_03_0825 - 20092781-20092801,20092844-20093079,20093166-200932... 33 0.27 03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583... 33 0.27 06_02_0037 - 10856616-10856915,10857527-10860238 31 0.83 05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 31 0.83 06_02_0035 + 10816723-10819497,10819964-10820011 31 1.1 11_06_0239 + 21637451-21638098,21638172-21638714 30 1.5 10_07_0181 - 13884007-13884767,13885263-13885329 30 1.5 03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 30 1.5 02_02_0357 + 9360108-9360754,9363732-9364137 29 2.5 11_03_0176 - 11260900-11261286,11261459-11261593,11262971-112631... 29 3.3 06_01_0410 + 2928382-2930973 29 3.3 02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200,145... 29 3.3 11_06_0610 - 25449085-25453284 29 4.4 11_01_0389 - 2937242-2939476,2939556-2939666,2941254-2941450,294... 29 4.4 07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 29 4.4 06_02_0019 - 10656005-10657511,10657712-10658739 29 4.4 10_08_0357 - 17158414-17160150,17160534-17160710 28 5.9 07_01_0895 + 7506460-7507929 28 5.9 01_01_0555 + 4080316-4081680 28 5.9 08_01_1061 - 10804269-10804352,10804464-10804593,10804696-108047... 28 7.7 07_01_1127 + 10456895-10457388,10457488-10458112 28 7.7 06_02_0024 - 10714741-10716241,10716774-10717840 28 7.7 06_02_0016 - 10623796-10625317,10626493-10627541 28 7.7 05_03_0545 - 15244647-15245147,15245342-15245635 28 7.7 01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542... 28 7.7 >01_07_0065 - 40851101-40851247,40851352-40851495,40851781-40851872, 40851954-40852035,40852127-40852193,40852284-40852375, 40852470-40852586,40852764-40852881,40852969-40853161, 40853258-40853339,40853607-40853744,40853829-40854023 Length = 488 Score = 50.4 bits (115), Expect = 1e-06 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = +3 Query: 198 HQDHACLQPRQSKDNALDIWSIMFGVGGGALCMFSKNGGPVPINKNLWSVSYCLVTSSMA 377 H H + + D L WSIM G+ L + +P+NK L++ SY VT+ A Sbjct: 325 HYGHVLVHMKSHTDR-LKQWSIM-GITLLILGLTLHFSHAIPLNKQLYTFSYICVTAGAA 382 Query: 378 FFIQAVLYFIVDLKN-KWGGRPLYYAGQNALFLYV 479 + + YF+VD+ N + PL + G NA+ +YV Sbjct: 383 GIVFCMFYFLVDILNLHYPFAPLKWTGMNAMLVYV 417 >05_01_0406 + 3197189-3197389,3197491-3197628,3198463-3198544, 3198658-3198734,3198829-3198935,3199367-3199505, 3200602-3200718,3200850-3200941,3201096-3201162, 3201249-3201355,3201468-3201546,3201751-3201894, 3202095-3202235 Length = 496 Score = 39.9 bits (89), Expect = 0.002 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = +3 Query: 324 INKNLWSVSYCLVTSSMAFFIQAVLYFIVDLKNKWGGRPLY-YAGQNALFLYV 479 I+K L++VSY L+T ++ F+ +LY+IVD+ N L+ + G NAL +YV Sbjct: 375 ISKPLYTVSYMLLTGGVSGFLLLLLYYIVDVINIKKPFILFQWMGMNALIVYV 427 Score = 28.7 bits (61), Expect = 4.4 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +2 Query: 50 GYIDRTLLGPAHLYRGGTFK 109 G++DR LLG HLY+ +K Sbjct: 265 GFVDRVLLGENHLYKNPVYK 284 >11_02_0049 - 7751779-7751925,7752046-7752189,7752398-7752489, 7752745-7752811,7753148-7753264,7753318-7753462, 7753574-7753689,7753789-7753865,7753995-7754076, 7754180-7754317,7754781-7754999 Length = 447 Score = 38.3 bits (85), Expect = 0.005 Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 4/64 (6%) Frame = +3 Query: 300 SKNGGPVPINKNLWSVSYCLVTSSMAFFIQAVLYFIVDLKNKWGGRP----LYYAGQNAL 467 S++ +PINK L+S+SY T+ A + + Y ++D+ WG R L + G NA+ Sbjct: 316 SRSFQAIPINKQLYSLSYVCFTAGAAGVVLSAFYILIDV---WGLRTPFLFLEWIGMNAM 372 Query: 468 FLYV 479 ++V Sbjct: 373 LVFV 376 >11_06_0013 - 19252779-19252805,19252947-19253090,19253572-19253663, 19253757-19253835,19253965-19254031,19254163-19254254, 19254986-19255102,19255254-19255365,19255479-19255594, 19255680-19255756,19255912-19255993,19256077-19256214, 19258806-19259009 Length = 448 Score = 37.9 bits (84), Expect = 0.007 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Frame = +3 Query: 324 INKNLWSVSYCLVTSSMAFFIQAVLYFIVDLKN-KWGGRPLYYAGQNALFLYV 479 +NK+L+S+SY VT+ A +Y +VD+K K P+ + G++AL ++V Sbjct: 365 MNKSLYSLSYTCVTTGTAGLFFVAIYLLVDVKGYKRPVLPMEWMGKHALMIFV 417 >02_04_0050 - 19245087-19245113,19245306-19245449,19245546-19245637, 19245733-19245811,19245902-19245968,19246084-19246175, 19246267-19246383,19246472-19246583,19246884-19246990, 19247113-19247189,19247351-19247432,19247526-19247663, 19248176-19248234,19249155-19249233 Length = 423 Score = 36.7 bits (81), Expect = 0.017 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%) Frame = +3 Query: 297 FSKNGGPVPINKNLWSVSYCLVTSSMAFFIQAVLYFIVDLKNKWGGR----PLYYAGQNA 464 FS + + +NK L+++SY L TS A + A +Y +VD+ +G R P+ + G++A Sbjct: 331 FSMDFIGIRMNKPLYTISYALATSGAAGLLFAGIYTLVDV---YGFRKLTIPMEWMGKHA 387 Query: 465 LFLYV 479 L +YV Sbjct: 388 LMIYV 392 >04_03_0825 - 20092781-20092801,20092844-20093079,20093166-20093244, 20093344-20093482,20093533-20093624,20093714-20093830, 20093930-20094041,20094154-20094260,20094351-20094427, 20094517-20094598,20094702-20094839,20095495-20095608 Length = 437 Score = 32.7 bits (71), Expect = 0.27 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = +3 Query: 324 INKNLWSVSYCLVTSSMAFFIQAVLYFIVDL-KNKWGGRPLYYAGQNALFLYV 479 +NK L++VSY L T+ A + A +Y +VD+ ++ + + G +AL +YV Sbjct: 356 MNKPLYTVSYALATAGAAGLLFAGIYALVDMYGHRRPTAVMEWMGTHALMIYV 408 >03_05_0712 - 27057858-27057941,27058093-27058182,27058268-27058384, 27059759-27059866,27060314-27060406,27060499-27060669, 27061505-27061757,27061860-27062138,27062939-27063273, 27063364-27064332,27064711-27065182,27065243-27065291, 27066564-27066804,27067606-27067695,27068172-27068294, 27068365-27068418 Length = 1175 Score = 32.7 bits (71), Expect = 0.27 Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Frame = -1 Query: 563 RRVLPVIERASAPRGTSAREVTLQQL*ADVKE*SILTSVIQRSAAPL--VLQIDDEVQHG 390 R+V P++ + RG+SARE+T L V E L S ++R+AA + Q+ H Sbjct: 9 RQVPPLLHAMVSLRGSSAREITRDALLQKVSEERQLRSHLRRAAAAALSIQQLTKSANHL 68 Query: 389 LY---EERHR-*RHETVGH 345 ++ +E HR RH V H Sbjct: 69 MWPFQKEVHRVIRHVAVVH 87 >06_02_0037 - 10856616-10856915,10857527-10860238 Length = 1003 Score = 31.1 bits (67), Expect = 0.83 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 149 ILGVFSGVLVVQAGLTPPGSCLPTTTPEQG*CAG 250 ++ + + + QAGLTPPG P +G AG Sbjct: 759 LISILAATITYQAGLTPPGDVWPAADDGEGHAAG 792 >05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 Length = 415 Score = 31.1 bits (67), Expect = 0.83 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 9/65 (13%) Frame = +2 Query: 11 GNHSLKNC-TGGIAGYIDRTLLGP-----AHLY---RGGTFKELYRTVVPHDPEGILGVF 163 GN LK +GGIAG + RT + P HL G + E++++++ H EG G+F Sbjct: 131 GNPHLKRLISGGIAGAVSRTAVAPLETIRTHLMVGSNGNSTAEVFQSIMKH--EGWTGLF 188 Query: 164 SGVLV 178 G V Sbjct: 189 RGNFV 193 >06_02_0035 + 10816723-10819497,10819964-10820011 Length = 940 Score = 30.7 bits (66), Expect = 1.1 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 149 ILGVFSGVLVVQAGLTPPGSCLPT 220 +LG+ + + QAGL PPGS PT Sbjct: 780 LLGILAASVTYQAGLVPPGSVWPT 803 >11_06_0239 + 21637451-21638098,21638172-21638714 Length = 396 Score = 30.3 bits (65), Expect = 1.5 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -1 Query: 362 HETVGHRPQVLVDGHRAAVLREHAEGATADTEHY 261 HE +GH + GHR AV + A A AD Y Sbjct: 53 HEFLGHDLYTELPGHRFAVTADFAAAAAADASRY 86 >10_07_0181 - 13884007-13884767,13885263-13885329 Length = 275 Score = 30.3 bits (65), Expect = 1.5 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = +2 Query: 65 TLLGPAHLYRGGTFKELYRTVVPHDPEGILGVFSGVLVVQAGLTPPGSCLPTTTP 229 TLLGP L RG TF+ + + P P VL L PPG + P Sbjct: 20 TLLGPVALVRGVTFRVVNKCPFPVWPAAAPNAGHPVLAGGGFLLPPGQSRRVSAP 74 >03_02_0402 - 8151448-8151669,8151916-8152417,8154537-8155105 Length = 430 Score = 30.3 bits (65), Expect = 1.5 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = -3 Query: 252 YPAHYPCSGVVVGKHDPGGVRPACTTSTPEKTPSIPSGS*GTTVRYNSLKVPPRYRCAG 76 +P HYP V G+ P G++PA T E +I + ++ +L++ P C G Sbjct: 118 HPQHYPGWPGVSGRPHPCGLQPAMPTPYVEHQKAITIRN-DVNLKKETLRIEPDEECPG 175 >02_02_0357 + 9360108-9360754,9363732-9364137 Length = 350 Score = 29.5 bits (63), Expect = 2.5 Identities = 20/65 (30%), Positives = 30/65 (46%) Frame = +3 Query: 42 GSLDTSIERYWAPRICTEVEPSRSYTAPSCLTTLRVYWASSQECWWCRLASRHQDHACLQ 221 G++D ++ + + P I T + R T S TL C+ C+ H CLQ Sbjct: 261 GTIDANVSKDFQPPIPTPSQNDRPQTDSSAKKTLI--------CYNCK-GPGHYSRDCLQ 311 Query: 222 PRQSK 236 PRQS+ Sbjct: 312 PRQSR 316 >11_03_0176 - 11260900-11261286,11261459-11261593,11262971-11263117, 11263754-11263926,11264661-11264748,11265587-11265804, 11266367-11266424,11267133-11267219 Length = 430 Score = 29.1 bits (62), Expect = 3.3 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%) Frame = -2 Query: 337 RFLLMGTGPPFLENMQR-APPPTPNIIDQISSALS---LLWR 224 R LL+ G PFL + R PPPT ++++ + +S LWR Sbjct: 3 RALLLRRGHPFLRRLLRPPPPPTSSVLESCNRNVSPRVQLWR 44 >06_01_0410 + 2928382-2930973 Length = 863 Score = 29.1 bits (62), Expect = 3.3 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = +3 Query: 285 ALCMFSKNGGPVPINKNLWSVSYCL-VTSSMAFFIQAVLYFIVDLKNKW 428 +LC+ SK + N + W ++C+ + F IQ V++ + W Sbjct: 519 SLCVVSKRASSLQFNADFWKSAWCVQLVFKQTFAIQKVMFSNEAIMKSW 567 >02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200, 1457918-1457971,1458417-1458482,1458593-1458679, 1459338-1459394,1459470-1459500,1459577-1459634, 1459710-1459761,1459881-1459917,1460008-1460210, 1460556-1460633,1460683-1460853,1461126-1461239 Length = 548 Score = 29.1 bits (62), Expect = 3.3 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 228 GVVVGKHDPGGVRPACTTSTPEKTPSIPSGS 136 G ++G +DPG A S PE++P+ SG+ Sbjct: 211 GCLMGTNDPGTPSKATKASEPEQSPATTSGT 241 >11_06_0610 - 25449085-25453284 Length = 1399 Score = 28.7 bits (61), Expect = 4.4 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = -3 Query: 171 TPEKTPSIPSGS*GTTVR-YNSLKVPPRYRCAGPSSVLSMYPAIPPVQFLS 22 TPEK+PS PSG GT S PP + P S P PP +S Sbjct: 817 TPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEKSSSP--PPEAHVS 865 >11_01_0389 - 2937242-2939476,2939556-2939666,2941254-2941450, 2941543-2941633 Length = 877 Score = 28.7 bits (61), Expect = 4.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +2 Query: 380 LHTGRAVLHRRSEEQVGRQTSVLRWSKCSIP 472 LH V + SE+ +GR T+ + CSIP Sbjct: 478 LHNKNLVANHLSEQNIGRNTTAVEKDCCSIP 508 >07_03_0474 + 18534071-18534238,18534349-18534445,18534992-18535122, 18535191-18535286,18535459-18535464,18535521-18535688, 18535892-18536020,18536613-18536673,18536928-18537031, 18537137-18537220,18538433-18538461,18538506-18538617, 18539200-18539313,18539767-18539832,18540237-18540309, 18540396-18540482,18540710-18540764,18540869-18540940, 18541039-18541101,18541177-18541294,18541377-18541451 Length = 635 Score = 28.7 bits (61), Expect = 4.4 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = -3 Query: 582 NHINMAPACVASN*ACVGASRYQCKGSDASTALSRRKGIEHFDQRN 445 N++N++PA S+ CV A +Y G + L++ + + RN Sbjct: 113 NYLNISPAICESSQYCVNADKYARDGPSDTYPLAKWRILNRLHDRN 158 >06_02_0019 - 10656005-10657511,10657712-10658739 Length = 844 Score = 28.7 bits (61), Expect = 4.4 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%) Frame = +2 Query: 149 ILGVFSGVLVVQAGLTPPGSCLPTTTPEQG*CAG--YLVDNVRCRRWR 286 +LG+ + + QAGL PPG + G AG L DN R RR+R Sbjct: 666 LLGILAASVTYQAGLHPPGGVWQSDDDGAGHAAGNPVLRDN-RRRRYR 712 >10_08_0357 - 17158414-17160150,17160534-17160710 Length = 637 Score = 28.3 bits (60), Expect = 5.9 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Frame = -3 Query: 264 LSTKYPAHYP--CSGVVVGKHDPGGVRPACTTSTPEKTPSIPSGS*GTTVRYNSLKVPPR 91 + T AH+ C VVVG GGV A S K + G T Y SL+ P Sbjct: 123 VKTGTAAHHTVQCDAVVVGSGCGGGVAAAVLASKGYKVVVVEKGDYFATEDYTSLEGPSM 182 Query: 90 YR 85 R Sbjct: 183 ER 184 >07_01_0895 + 7506460-7507929 Length = 489 Score = 28.3 bits (60), Expect = 5.9 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = +2 Query: 122 TVVPHDPEGILGVFSGVLVVQAG 190 TVV H PEG+LGV+ V + G Sbjct: 214 TVVRHLPEGLLGVYDFVAAIAVG 236 >01_01_0555 + 4080316-4081680 Length = 454 Score = 28.3 bits (60), Expect = 5.9 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 264 MFGVGGGALCMFSKNGGPVPINKNLWSVSYCLVTSSM 374 + G+GGGA+ + ++ GG + + SYCLV S+ Sbjct: 235 LVGLGGGAVSLVTQLGGATSLGRRF---SYCLVPHSV 268 >08_01_1061 - 10804269-10804352,10804464-10804593,10804696-10804745, 10805154-10805216,10806235-10806375,10806541-10806925, 10807735-10808339 Length = 485 Score = 27.9 bits (59), Expect = 7.7 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +3 Query: 312 GPVPINKNLWSVSYCLVTSSMAFFIQAVLYFIVDL 416 GPVP + W ++ L ++ +F I +LY +DL Sbjct: 269 GPVPFWQRTWFLALLLAMAAASFAIALLLYLGLDL 303 >07_01_1127 + 10456895-10457388,10457488-10458112 Length = 372 Score = 27.9 bits (59), Expect = 7.7 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +3 Query: 42 GSLDTSIERYWAPRICTEVEPSRSYTAPSCLTTLRVYWASSQECWWCRLASRHQDHACLQ 221 G+ D ++ + + P I T + R T S TL C+ C+ H CLQ Sbjct: 283 GTTDANVSKDFQPPIPTPSQNDRPQTDSSAKKTLI--------CYNCKEPG-HYSRDCLQ 333 Query: 222 PRQSK 236 PRQS+ Sbjct: 334 PRQSR 338 >06_02_0024 - 10714741-10716241,10716774-10717840 Length = 855 Score = 27.9 bits (59), Expect = 7.7 Identities = 12/37 (32%), Positives = 17/37 (45%) Frame = +2 Query: 149 ILGVFSGVLVVQAGLTPPGSCLPTTTPEQG*CAGYLV 259 + + + QAGLTPP C + G AG+ V Sbjct: 521 LFAILCATITYQAGLTPPSGCWQDDDKQHGYHAGHPV 557 >06_02_0016 - 10623796-10625317,10626493-10627541 Length = 856 Score = 27.9 bits (59), Expect = 7.7 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +2 Query: 149 ILGVFSGVLVVQAGLTPPGSCLPTTTPEQG*CAG--YLVDN 265 +L + + QAGLTPPG E G AG L+DN Sbjct: 524 LLAILVATIAYQAGLTPPGGFWDKDDGESGHHAGVPVLLDN 564 >05_03_0545 - 15244647-15245147,15245342-15245635 Length = 264 Score = 27.9 bits (59), Expect = 7.7 Identities = 20/65 (30%), Positives = 29/65 (44%) Frame = +3 Query: 42 GSLDTSIERYWAPRICTEVEPSRSYTAPSCLTTLRVYWASSQECWWCRLASRHQDHACLQ 221 G+ D ++ + + P I T + R T S TL C+ C+ H CLQ Sbjct: 175 GTTDANVSKDFQPPIPTPSQNDRPQTDSSAKKTLI--------CYNCKEPG-HYSRDCLQ 225 Query: 222 PRQSK 236 PRQS+ Sbjct: 226 PRQSR 230 >01_05_0489 + 22652479-22653718,22653882-22654063,22654172-22654279, 22654364-22654467,22654570-22654657,22654760-22654870, 22654955-22655020,22656740-22656799,22656869-22657411, 22657646-22657765,22657845-22657964,22659083-22659136, 22659236-22659331,22660580-22660681 Length = 997 Score = 27.9 bits (59), Expect = 7.7 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -3 Query: 225 VVVGKHDPGGVRPACTTSTPEKTPS 151 V +GK DP GV P S+P PS Sbjct: 181 VDLGKQDPSGVSPTSGVSSPALAPS 205 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,204,498 Number of Sequences: 37544 Number of extensions: 551417 Number of successful extensions: 1869 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 1735 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1867 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1691314196 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -