Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0324
         (668 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122161-1|AAM52673.1|  576|Drosophila melanogaster LD22376p pro...    89   4e-18
AE014298-692|AAF45996.1|  576|Drosophila melanogaster CG6903-PA ...    89   4e-18

>AY122161-1|AAM52673.1|  576|Drosophila melanogaster LD22376p
           protein.
          Length = 576

 Score = 89.4 bits (212), Expect = 4e-18
 Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = +3

Query: 228 QSKDNALDIWSIMFGVGGGALCMFSKNGGPVPINKNLWSVSYCLVTSSMAFFIQAVLYFI 407
           QS+     + +I+ G+ GGALC FS+ GG +P+NKNLWS+S+  VT S+A  I +++Y+ 
Sbjct: 440 QSRIRRWTLLAILLGLIGGALCGFSREGGAIPMNKNLWSLSFVCVTVSLALLILSLMYYF 499

Query: 408 VDLKN--KWGGRPLYYAGQNALFLYVGSELLKRHFP 509
           +D++    W G P    G NA+ +YVG  +L +  P
Sbjct: 500 IDVRETWSWSGYPFTECGMNAIVMYVGHSVLHKMLP 535



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +2

Query: 5   PPGNHSLK---NCTGGIAGYIDRTLLGPAHLYRGGTFKELYRTVVPHDPEGILGVFSGVL 175
           P G H       C GG AGY D  +LG AH+Y+  T K +Y +    DPEGI G    V+
Sbjct: 363 PGGKHDYNAHPKCIGGAAGYADLQVLGNAHIYQHPTAKYVYDSTA-FDPEGIFGCILSVV 421

Query: 176 VVQAG 190
            V  G
Sbjct: 422 QVLLG 426


>AE014298-692|AAF45996.1|  576|Drosophila melanogaster CG6903-PA
           protein.
          Length = 576

 Score = 89.4 bits (212), Expect = 4e-18
 Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = +3

Query: 228 QSKDNALDIWSIMFGVGGGALCMFSKNGGPVPINKNLWSVSYCLVTSSMAFFIQAVLYFI 407
           QS+     + +I+ G+ GGALC FS+ GG +P+NKNLWS+S+  VT S+A  I +++Y+ 
Sbjct: 440 QSRIRRWTLLAILLGLIGGALCGFSREGGAIPMNKNLWSLSFVCVTVSLALLILSLMYYF 499

Query: 408 VDLKN--KWGGRPLYYAGQNALFLYVGSELLKRHFP 509
           +D++    W G P    G NA+ +YVG  +L +  P
Sbjct: 500 IDVRETWSWSGYPFTECGMNAIVMYVGHSVLHKMLP 535



 Score = 48.4 bits (110), Expect = 9e-06
 Identities = 27/65 (41%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +2

Query: 5   PPGNHSLK---NCTGGIAGYIDRTLLGPAHLYRGGTFKELYRTVVPHDPEGILGVFSGVL 175
           P G H       C GG AGY D  +LG AH+Y+  T K +Y +    DPEGI G    V+
Sbjct: 363 PGGKHDYNAHPKCIGGAAGYADLQVLGNAHIYQHPTAKYVYDSTA-FDPEGIFGCILSVV 421

Query: 176 VVQAG 190
            V  G
Sbjct: 422 QVLLG 426


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,647,874
Number of Sequences: 53049
Number of extensions: 885544
Number of successful extensions: 2819
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2809
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)