Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0324
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68213-5|CAA92434.1| 512|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 30 1.3
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 29 3.9
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 29 3.9
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 28 5.2
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 6.9
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 9.1
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z68213-5|CAA92434.1| 512|Caenorhabditis elegans Hypothetical
protein C01F6.1 protein.
Length = 512
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +2
Query: 431 RQTSVLRWSKCSIPLRRLRAV-EASLPLHWYLEAPTHAQLLATHAGAMLIWLAVGV 595
R+T W+ SIPL L E+S+ LH Y P H L H L L GV
Sbjct: 175 RETKYPEWAAFSIPLFLLNYFNESSIQLHVYNYTPNHDDQLVGHCTTTLTQLQQGV 230
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = -3
Query: 540 ACVGASRYQCKGSDASTALSRRKGIEHFDQRNTEVCRPTCSSDRR*STARPV*RTPSMTS 361
+C + +YQ + S A + + NT+ C+PTC + S+ P+ TP S
Sbjct: 58 SCASSQQYQLQTSQCMPACQQSCSQQCQSNTNTQ-CQPTCQQSCQTSSCNPMTSTPIPAS 116
Query: 360 RDSRTPTTGSC 328
+ C
Sbjct: 117 QSCLPECENRC 127
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/58 (25%), Positives = 21/58 (36%)
Frame = +3
Query: 48 LDTSIERYWAPRICTEVEPSRSYTAPSCLTTLRVYWASSQECWWCRLASRHQDHACLQ 221
LDT W P I +P T P+C + + Q C C + + D Q
Sbjct: 91 LDTGSSNLWIPDITCGTKPENCSTVPACRGIICQFECDDQAC--CGAGANYTDSCFYQ 146
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/58 (25%), Positives = 21/58 (36%)
Frame = +3
Query: 48 LDTSIERYWAPRICTEVEPSRSYTAPSCLTTLRVYWASSQECWWCRLASRHQDHACLQ 221
LDT W P I +P T P+C + + Q C C + + D Q
Sbjct: 297 LDTGSSNLWIPDITCGTKPENCSTVPACRGIICQFECDDQAC--CGAGANYTDSCFYQ 352
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 234 KDNALDIWSIMFGVGGGALCMFS---KNGGP 317
KD A+DIW ++ G A+CM +NG P
Sbjct: 255 KDTAMDIWRMVLQEGVAAICMLCELIENGRP 285
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.2
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 322 PSTRTCGRCPTVS*RHRWRSSYRPCCTSS-SI*RTSGAADLCITLVKMLYSFTSAQSC*S 498
PST +CG + S + RS+ RP C+SS + C+ ++ TS+ S
Sbjct: 22 PSTSSCGCQASSSCANSCRSTCRPTCSSSGGFGCRMNCQNTCVNACNKQFAPTSSSSIVQ 81
Query: 499 VTSLALVPRGADARS 543
+ + V R +S
Sbjct: 82 IKNQPSVIRAVAGKS 96
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/68 (27%), Positives = 25/68 (36%)
Frame = -3
Query: 240 YPCSGVVVGKHDPGGVRPACTTSTPEKTPSIPSGS*GTTVRYNSLKVPPRYRCAGPSSVL 61
YP G V P P + +PS +GS G RY + P R P +
Sbjct: 811 YPYPGGPVPPGPPQNRMPPPPPAQGAPSPSGAAGSNGKQPRYGTPAPPSRASAPTPQPLS 870
Query: 60 SMYPAIPP 37
S P + P
Sbjct: 871 STMPVVAP 878
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 400 YSTACMKNAIDDVTRQ*DTDHRFLLMGTGPPFLENMQRAPPPTPNIIDQISSA 242
YS A M+ D+V ++ +D + P +EN++ PPP P+ Q A
Sbjct: 734 YSDAEMEELADEVDKKGPSDSKLA------PVVENLEANPPPDPSSSPQFLDA 780
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 400 YSTACMKNAIDDVTRQ*DTDHRFLLMGTGPPFLENMQRAPPPTPNIIDQISSA 242
YS A M+ D+V ++ +D + P +EN++ PPP P+ Q A
Sbjct: 734 YSDAEMEELADEVDKKGPSDSKLA------PVVENLEANPPPDPSSSPQFLDA 780
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,428,505
Number of Sequences: 27780
Number of extensions: 412467
Number of successful extensions: 1303
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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