Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0323
(660 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 58 1e-09
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 53 4e-08
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 48 9e-07
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 41 1e-04
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 33 0.028
SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 33 0.036
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 28 1.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 2.4
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 27 2.4
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 26 4.2
SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual 26 4.2
SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces po... 26 5.5
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 25 7.3
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 25 9.7
SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 9.7
SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyce... 25 9.7
SPAC959.10 |sen15||tRNA-splicing endonuclease subunit Sen15|Schi... 25 9.7
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 25 9.7
SPAC56F8.09 |rrp8||rRNA methyltransferase Rrp8 |Schizosaccharomy... 25 9.7
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 57.6 bits (133), Expect = 1e-09
Identities = 30/78 (38%), Positives = 43/78 (55%)
Frame = +3
Query: 279 SVKEVATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGK 458
S E T+ L +G +P I G +L +V A+D GYR IDTA +YGNE + GK
Sbjct: 4 SQTESTTVTLTNGMVIPRIGFGAFMLKYNECYGLVTQALDSGYRHIDTAAVYGNEDICGK 63
Query: 459 AIKNKIDDGTVRRDELLL 512
AI + + V+R ++ L
Sbjct: 64 AIVDWCEKNNVKRTDIFL 81
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 52.8 bits (121), Expect = 4e-08
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +3
Query: 306 LRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDG 485
L DG+ +P + LGT P V+TA+ GYR ID A IYGNE +G IK + G
Sbjct: 18 LADGSKIPGLGLGTWRSEPNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESG 74
Query: 486 TVRRDELLLWVN----CGVHS 536
R+D +WV C H+
Sbjct: 75 VPRKD---IWVTSKLWCNAHA 92
Score = 39.5 bits (88), Expect = 4e-04
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 509 IMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMSFE-GRQQF 652
+ KLW H + V A +L DL L++ D +LIH P+SF+ G +F
Sbjct: 82 VTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKTGEDKF 130
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 48.4 bits (110), Expect = 9e-07
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +3
Query: 294 ATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNK 473
A L +G +P I LGT V A+ GYR IDTA+IYGNEK IG+ I+
Sbjct: 13 AYFTLPNGDKIPSIGLGTWRSGKDETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR-- 70
Query: 474 IDDGTVRRDELLLWVN----CGVHSIALI 548
+ G R D +WV C H L+
Sbjct: 71 -ESGVPRTD---IWVTSKLWCNAHRAGLV 95
Score = 40.7 bits (91), Expect = 2e-04
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2
Query: 509 IMGKLWSTFHRTDLVETACRISLADLGLEFFDLFLIHNPMS 631
+ KLW HR LV A +L DL LE+ D +LIH P +
Sbjct: 81 VTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFA 121
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 41.1 bits (92), Expect = 1e-04
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 300 LKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 479
+KL +G P A G+ ++ + V A+ GYR ID+A +Y NE G+AI ++
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTKCFDSVYAALQCGYRHIDSAQMYHNEADCGRAILKFME 65
Query: 480 D-GTVRRD 500
+ GT R D
Sbjct: 66 ETGTKRED 73
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 33.5 bits (73), Expect = 0.028
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Frame = +3
Query: 324 MPVIALGTALLPP------RLATEIVETAIDMGYRAIDTAYIYGNEKLIGKAIK 467
+P +GTAL R + V+ A+ G+ ID A +YGNE+ +G A+K
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALK 65
Score = 33.5 bits (73), Expect = 0.028
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 536 HRTDLVETACRISLADLGLEFFDLFLIHNPMSF 634
H D + A SL LG ++ DL+L+H+P+ F
Sbjct: 82 HNVDNIPEALNESLRKLGTDYLDLYLLHSPIPF 114
>SPAC1565.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 773
Score = 33.1 bits (72), Expect = 0.036
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = +3
Query: 273 KGSVKEVATLKLRDGTFMPVIALGTALLPPRLATEIVETAIDMGYRAIDTAYIYGNEKLI 452
K S+K++ G ++ G A++P L +++ A +G R + G +LI
Sbjct: 366 KSSLKKMNQNSQLTGYIAVLLKKGLAIVPYTLPIKML-LADAVGKRTSKIGKLRGTNELI 424
Query: 453 GKAIKNKIDDGTVRRDELLLWVNCGVHSI 539
G+ + K +G RD+LL + HS+
Sbjct: 425 GEGVLTKSKNGPSMRDQLLKNIQLQDHSL 453
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +3
Query: 381 VETAIDMGYRAIDTAYIYGN---EKLIGKAIK 467
++ A D+G DTA IY N E ++GKAIK
Sbjct: 50 LKQAWDLGINTFDTAEIYSNGNSETVMGKAIK 81
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 551 PDQCDGMYSTIYP**ELVSPH-GAVVNLVLDRFSYELFVAVN 429
PD+C + ST+YP ++ P +V + D FS F+A +
Sbjct: 290 PDECVEVVSTLYPVLSIICPTLYSVYKDIFDLFSQRSFLATS 331
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -2
Query: 317 PVA*FQSSHFLHAPFQLSFVQSATLVLYCSSVRSLVSRFCLPLSKRRRPLPGDSSIL 147
PV+ F S F A F S ++ +L + SSV + + LS P DSS++
Sbjct: 790 PVSNFWESEFASAVFPRSISKTTSLSVNNSSVNPSLDSEPVQLSNMEEPQHQDSSVV 846
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 545 DLVETACRISLADLGLEFFDLFLIH 619
D +E A +SL LG++ DL+ +H
Sbjct: 102 DYIEKALDLSLKRLGIDCIDLYYVH 126
>SPAC186.01 |||DIPSY family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 397 SIAVSTISVANRGGSKAVPKAMTGMNVPSRSFKVA--TSFTLPFSLASFSLRP 245
SI STI+ GS+ +TG N P + +V T+ T +L S S P
Sbjct: 99 SIITSTITTTITSGSQLYTTTITGQNTPVDTVEVVIPTAGTFTTTLTSGSSYP 151
>SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 875
Score = 25.8 bits (54), Expect = 5.5
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 602 RKTPSPGLPVKSCRPSPPDQCDG 534
+K+PSP LP PD DG
Sbjct: 465 QKSPSPSLPPNELNEPEPDDMDG 487
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 553 HQISAMECTPQFTHNKSSSRLTVPSSILFLIAFPMSFSLP 434
H S M T F KSS+ LT+P ++L + +F +P
Sbjct: 70 HSSSPMHATKGFRFPKSSTPLTLP-AVLSVASFANLLQIP 108
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 559 GLQDFTGRPGLGVFRPLPHPQSNVF 633
GL D G+ RPL +PQ++VF
Sbjct: 54 GLFDTAGQEDYDRLRPLSYPQTDVF 78
>SPBPB7E8.01 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 569
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 396 DMGYRAIDTAYIYGNE 443
DMGY A+D AY+ +E
Sbjct: 233 DMGYEAVDLAYVLFHE 248
>SPCC1620.11 |mug87||nucleoporin Nic96 homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 417 DTAYIYGNEKLIGKAIKNKIDDGTV 491
D+ ++GN+ +I KA + +DG+V
Sbjct: 228 DSVTVFGNKGIISKAFDIETEDGSV 252
>SPAC959.10 |sen15||tRNA-splicing endonuclease subunit
Sen15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 143
Score = 25.0 bits (52), Expect = 9.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 263 FVQSATLVLYCSSVRSLVSRFCLPLSKRRRPLPGDSSIL 147
++Q + + SSV + + LPL K R L GD L
Sbjct: 76 YLQETISIEFLSSVFDSMKKLSLPLVKDARGLSGDEFFL 114
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 474 IDDGTVRRDELLLWVNCGVH 533
+DD ++RD+LL + N VH
Sbjct: 183 LDDSIIKRDDLLSFCNVEVH 202
>SPAC56F8.09 |rrp8||rRNA methyltransferase Rrp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 318
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 153 GGVSRKRASAFGQRQTKTRHERPHR*TI*DQGRRLNEAKLKGSVKEVAT 299
G VS+ + + + + + ++ R + D+G +LNE LK K V T
Sbjct: 9 GPVSKSASDQTKESRKEKKRKKGERKNVGDKGEKLNEKVLK-KAKSVTT 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,631,077
Number of Sequences: 5004
Number of extensions: 53275
Number of successful extensions: 171
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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