Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0321
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    26   0.30 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    25   0.69 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    24   1.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   2.1  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.9  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   4.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.6  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 422 CWGPRVDLSSRRGAPELVPCLPTTPHPQ 339
           C    V+   RR  P  + CL TTP P+
Sbjct: 14  CTYGNVNYRQRRSQPLKISCLKTTPPPE 41


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 101 SFSLREDESRNDDANTARVQSRVRGGRHSLDEVRQ 205
           S++L   E+ +   N   +   V GGRH L+ + Q
Sbjct: 149 SYALTVAETADGRLNATIIADNVFGGRHGLETLNQ 183


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 249 GIHQVRQPLRIR*QWRRC-SKTPCSLTWRKHLRVGCG 356
           G+H+ + P+R+  Q   C  K   +L  ++H+R+  G
Sbjct: 183 GVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTG 219


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 247 KNPFSELMARSTPSLSNFIQAMSSPTHSTLYPG 149
           +NP  E    S  ++ + + A+S  T+STL PG
Sbjct: 31  ENPPPEDTPLSFKNIESHLNAISQITNSTLDPG 63


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 544 RRPAGVPLVVESRDWQHGVF 603
           ++ A  P+  E  DW +G+F
Sbjct: 87  KQQANPPISTEHCDWLYGIF 106


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 187 AMSSPTHSTLYPGSVG 140
           A++ PT+++LY G+ G
Sbjct: 269 ALADPTNTSLYAGTYG 284


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 362 LPTTPHPQVFPPR 324
           LP  PHP   PPR
Sbjct: 735 LPPPPHPHHQPPR 747


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -1

Query: 362 LPTTPHPQVFPPR 324
           LP  PHP   PPR
Sbjct: 627 LPPPPHPHHQPPR 639


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
            protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
 Frame = +3

Query: 291  WRRCSKTPCSLTWR----KHLRVGCGGKAWDQLR--SASSTG 398
            WR C K  C   +R      LR   GG     +R   A STG
Sbjct: 886  WRECDKATCEKLFRMKKSSALRPASGGTTARVVRCVCAGSTG 927


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 366 MPSHHTPPSGVSATLVNTVFLNTVAIAIGF 277
           +P HH P     +    T+FL   A  I F
Sbjct: 125 LPPHHAPEEKKRSFWAVTIFLVLAASVIFF 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,600
Number of Sequences: 336
Number of extensions: 4476
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)