Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0321
(632 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0010 - 21496089-21496487 31 0.58
08_02_0773 + 21043553-21043813,21044775-21045203 31 0.76
05_05_0349 - 24282924-24283493 30 1.8
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 30 1.8
04_04_1184 + 31558678-31558707,31559485-31559644,31559732-315603... 29 4.1
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 29 4.1
07_01_1106 - 10187609-10190041,10190292-10191932 28 5.4
10_01_0098 - 1193184-1193703,1193814-1193872 28 7.1
09_04_0436 - 17558603-17559265,17559322-17559384 28 7.1
03_05_1150 - 30758981-30759778,30759970-30760729,30760823-307609... 28 7.1
11_06_0349 + 22565405-22566279,22567774-22569772,22570360-225704... 27 9.4
08_02_1150 + 24709071-24710774 27 9.4
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 27 9.4
07_01_1053 + 9247272-9247386,9248192-9248331 27 9.4
05_07_0054 + 27368832-27369287 27 9.4
04_03_1047 - 21978782-21978808,21979301-21980168,21980272-219803... 27 9.4
03_06_0080 - 31512792-31513046,31514087-31514202,31514797-315149... 27 9.4
01_03_0206 - 13783169-13783651,13783761-13783903,13783962-137841... 27 9.4
>05_05_0010 - 21496089-21496487
Length = 132
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 620 LMEAPMNTPCCQSRDSTTSGTPAGRLPPSRMADIGTPSSSP 498
L EA +N P + R T+SG G P R++ + ++SP
Sbjct: 12 LQEARVNLPSTRGRGGTSSGVVGGSSSPRRLSSSSSSTASP 52
>08_02_0773 + 21043553-21043813,21044775-21045203
Length = 229
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 412 PGLTFPVDEALRSWSHAFPPHPTLRCFRHVSEHGVFE 302
P L P ++ +R W+H + H T EHG FE
Sbjct: 100 PTLACPSNDGIRFWAHEWEKHGTCAAAALGDEHGYFE 136
>05_05_0349 - 24282924-24283493
Length = 189
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 630 GLGPHGSSHEHAVLPVPRLDYERYAGRPSAAQQDGGYRHTLELSH-SPSIMGHCSAGVQN 454
G+G HG H HA L P+L + + RP Q G+ L++SH SP + A VQ
Sbjct: 87 GVGGHGHGHSHAQL--PQLHHRMHPPRP---PQGPGHFGGLDISHPSPWHYVYFPARVQA 141
Query: 453 LEFGCAAGV 427
+ A V
Sbjct: 142 MAPAAAGHV 150
>03_02_0740 - 10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = +2
Query: 332 ETPEGGVWWEG-MGPAPERLVDWKGQPWD----PSKKTPAAHPNS 451
E EGG WWEG + + +D+ PW+ K + HP+S
Sbjct: 1176 ELEEGGSWWEGRVSAVKPKSLDFPESPWEKYVIQYKNDGSDHPHS 1220
>04_04_1184 +
31558678-31558707,31559485-31559644,31559732-31560394,
31560512-31560956,31561090-31561171,31561319-31561534
Length = 531
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = -1
Query: 584 SRDSTTSGTPAGRLPPSRMADIGTPSSSPTHRLSWDTALPGCRIWNLDVQPEFSCWGPRV 405
S+D + +GTP G + P+R + PS+ R TA PG N D P F+ G
Sbjct: 306 SQDPSRTGTPLGSMTPTRSPNCSIPSTPVGGR---STASPGDD--NTDDGPYFNRKGGTN 360
Query: 404 DLS 396
++S
Sbjct: 361 EIS 363
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/88 (25%), Positives = 25/88 (28%)
Frame = -1
Query: 602 NTPCCQSRDSTTSGTPAGRLPPSRMADIGTPSSSPTHRLSWDTALPGCRIWNLDVQPEFS 423
N P + P G +PP M P P + PG I N P
Sbjct: 128 NVPTMPQTGAPPGSMPPGSMPPGSMPMQMAPLPRPPTLPPPTSGAPGAPIPNSGAPPAMY 187
Query: 422 CWGPRVDLSSRRGAPELVPCLPTTPHPQ 339
P GAP V P PQ
Sbjct: 188 QTNPPQPAGPTSGAPPPVSAPPPAAPPQ 215
>07_01_1106 - 10187609-10190041,10190292-10191932
Length = 1357
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -2
Query: 481 GTLLCRGAESGIWMCSRSFLAGVPGLTFPVDEALRSWSHAFPPHPTLRCFRHVS 320
G LLC A SG+ S++ L+ + L + ALR P H +CF+ S
Sbjct: 747 GNLLCMKALSGLLWHSKTALSEIDSLVGGIVPALRLCYDLLPSH-LKQCFKFCS 799
>10_01_0098 - 1193184-1193703,1193814-1193872
Length = 192
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 201 DKDGVLRAINSENGFFGIHQVRQ-PLRIR*QWR 296
D D R I SENG ++RQ P +IR WR
Sbjct: 158 DLDAEKRTIASENGPLSAARIRQLPAKIRFHWR 190
>09_04_0436 - 17558603-17559265,17559322-17559384
Length = 241
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -1
Query: 620 LMEAPMNTPCCQSRDSTTSGTPAGRLPPSRMADIGTP----SSSPTHRLSWDTALPGCR 456
L A + C + T PS + TP S++PT LSW T P C+
Sbjct: 135 LRHAATESQACAGSPAATRPLRLASASPSTTSSSATPPPNASATPTPSLSWRTTPPPCQ 193
>03_05_1150 -
30758981-30759778,30759970-30760729,30760823-30760920,
30761997-30762521
Length = 726
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 336 HLRVGCGGKAWDQLRSASSTGKVNPGTPARKLRLHIQIP 452
H+ + GG W Q RSA S+ A+ +R + Q+P
Sbjct: 398 HVALFHGGDIWRQSRSAMSSAAAKMDVHAKLMRRYKQVP 436
>11_06_0349 +
22565405-22566279,22567774-22569772,22570360-22570478,
22570835-22571117
Length = 1091
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 75 KKRYIAAAFPSACGKTNLAMMTPTLPGYKVECVGDDIAWMKFDKDGVLRAI 227
++RY+A GKT LAM G + +C +A KF VLR++
Sbjct: 203 QQRYLAIVGFGGLGKTTLAMALYRKLGDEFDCRAFVLASQKFHLPTVLRSL 253
>08_02_1150 + 24709071-24710774
Length = 567
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -1
Query: 440 VQPEFSCWGPRVDLSSRRG----APELVPCLPTTPHPQVF 333
VQPE +G VD+ R G A EL+ +P P VF
Sbjct: 459 VQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVF 498
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -1
Query: 599 TPCCQSRDSTTSGT--PAGRLPPSRMADIGTPSSS 501
+P + R S +G P R PP+R+A G PSSS
Sbjct: 188 SPPPRLRTSRLAGAVAPRARRPPARLAAFGLPSSS 222
>07_01_1053 + 9247272-9247386,9248192-9248331
Length = 84
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -2
Query: 502 LPLTVYHGTLLCRGAE-SGIWMCSRSFLAGVPG 407
+PL HG+L+C G + G+ SF AG+ G
Sbjct: 1 MPLKCGHGSLMCSGVDGDGVVQHKESFGAGLGG 33
>05_07_0054 + 27368832-27369287
Length = 151
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = -1
Query: 629 ASDLMEAPMNTPCCQSRDSTTS---GTPAGRLPPSRMADIG--TPSSSPTHRL 486
A L++A M P S+ S ++ G PA R PP R G P+ P RL
Sbjct: 33 APALLQAAMQPPSSSSQASASALFQGAPARRPPPPRFGADGPLRPAPPPRRRL 85
>04_03_1047 -
21978782-21978808,21979301-21980168,21980272-21980399,
21981786-21982247,21982813-21982842,21983441-21983658,
21983777-21983894
Length = 616
Score = 27.5 bits (58), Expect = 9.4
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 371 PAPERLVDWKGQPWDPSK 424
P P+ VDW+G+P +P +
Sbjct: 11 PPPDAAVDWRGRPCEPRR 28
>03_06_0080 -
31512792-31513046,31514087-31514202,31514797-31514911,
31514997-31515056,31515619-31515688,31515952-31515986,
31516094-31516231,31516369-31516737
Length = 385
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 407 PWDPSKKTPAAHPNSRFCTPAEQCP--MIDGEWESS 508
PW ++ TP +H + +F P E C ++D +W S
Sbjct: 149 PW--TQPTPCSHVDLKFPVPPEHCTSGIMDNKWRRS 182
>01_03_0206 -
13783169-13783651,13783761-13783903,13783962-13784128,
13784641-13785149,13786031-13786312,13786397-13786792,
13787232-13787504
Length = 750
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 291 WRRCSKTPCSLTWRKHLRVGCGGKAWDQLRSASSTG 398
WRR ++TP ++ W + + +W + +ASS G
Sbjct: 493 WRRGAETPIAVKWEDRI-IEIREGSWSYIANASSVG 527
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,778,985
Number of Sequences: 37544
Number of extensions: 612961
Number of successful extensions: 2231
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2229
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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