Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0321
(632 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37396| Best HMM Match : PEPCK (HMM E-Value=0) 157 9e-39
SB_37397| Best HMM Match : PEPCK (HMM E-Value=0) 151 5e-37
SB_3810| Best HMM Match : PEPCK (HMM E-Value=0) 149 1e-36
SB_54941| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 30 1.8
SB_8173| Best HMM Match : GreA_GreB_N (HMM E-Value=0.27) 29 2.4
SB_49186| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 29 3.1
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 29 3.1
SB_15898| Best HMM Match : Fork_head (HMM E-Value=0) 29 4.1
SB_58895| Best HMM Match : SRCR (HMM E-Value=0) 28 5.5
SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_33574| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_13565| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_4879| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_37396| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 549
Score = 157 bits (380), Expect = 9e-39
Identities = 69/84 (82%), Positives = 77/84 (91%)
Frame = +3
Query: 3 SVIARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLAMMTPTLPGYKVECVGDD 182
SVIAR EGWLAEHM+I+G+TNP+GKK YIAAAFPSACGKTNLAM+TPT+PG+K ECVGDD
Sbjct: 113 SVIARDEGWLAEHMMILGLTNPEGKKIYIAAAFPSACGKTNLAMLTPTIPGWKCECVGDD 172
Query: 183 IAWMKFDKDGVLRAINSENGFFGI 254
IAWM FDKDG LRAIN E GFFG+
Sbjct: 173 IAWMWFDKDGTLRAINPECGFFGV 196
Score = 102 bits (244), Expect = 3e-22
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 8/92 (8%)
Frame = +2
Query: 254 SPGTSAATNPIAMATVFKNTVFTNVAETPEGGVWWEGMGPAPE--RLVDWKGQP-WDP-- 418
+PGTS +NPIAM+T K+T+FTNVA+T +G WWEG+ P + ++ W G P W P
Sbjct: 197 APGTSFLSNPIAMSTFQKDTIFTNVAKTSDGDFWWEGLNPPADGIKIRSWLGDPDWKPEV 256
Query: 419 ---SKKTPAAHPNSRFCTPAEQCPMIDGEWES 505
++KT AAHPNSRFC P++ CP++D +WE+
Sbjct: 257 AGKTRKT-AAHPNSRFCAPSDHCPIMDKDWEN 287
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +1
Query: 511 GVPISAILLGGRRPAGVPLVVESRDWQHGVFMGASMRSE 627
GVPISAIL GGRRP GVPLV++S +WQHGVF+ S+ SE
Sbjct: 290 GVPISAILFGGRRPYGVPLVMQSFNWQHGVFLATSLSSE 328
>SB_37397| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 613
Score = 151 bits (366), Expect = 5e-37
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +3
Query: 3 SVIARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLAMMTPTLPGYKVECVGDD 182
S IA EGWLAEHM+I+G+TNP+GKK YIAAAFPSACGKTNLAM+TPT+PG+K ECVGDD
Sbjct: 243 SNIAHDEGWLAEHMMIMGLTNPEGKKIYIAAAFPSACGKTNLAMLTPTIPGWKCECVGDD 302
Query: 183 IAWMKFDKDGVLRAINSENGFFGI 254
I WM FDKDG LRAIN E+GFFG+
Sbjct: 303 INWMWFDKDGTLRAINPESGFFGV 326
Score = 97.1 bits (231), Expect = 1e-20
Identities = 43/85 (50%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Frame = +2
Query: 257 PGTSAATNPIAMATVFKNTVFTNVAETPEGGVWWEGMGPAPERLVDWKGQP-WDPSKKTP 433
PGT+ +NPIAM T K+T+FTNVA T +G WWE ++ WKG P W P++ P
Sbjct: 328 PGTTFTSNPIAMKTFQKDTIFTNVAVTSDGDFWWE----EGIKIRSWKGDPDWKPTENGP 383
Query: 434 -AAHPNSRFCTPAEQCPMIDGEWES 505
AAHPNSRFC P++ CP++D +WE+
Sbjct: 384 TAAHPNSRFCAPSDHCPIMDKDWEN 408
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +1
Query: 511 GVPISAILLGGRRPAGVPLVVESRDWQHGVFMGASMRSE 627
GVPISAIL GGRRP GVPLV++S +WQHGVF+ S+ SE
Sbjct: 411 GVPISAILFGGRRPYGVPLVMQSFNWQHGVFLATSLSSE 449
>SB_3810| Best HMM Match : PEPCK (HMM E-Value=0)
Length = 707
Score = 149 bits (362), Expect = 1e-36
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +3
Query: 3 SVIARREGWLAEHMLIVGITNPQGKKRYIAAAFPSACGKTNLAMMTPTLPGYKVECVGDD 182
S IA +EGWLAEHMLI+ +TNP+GKK+YIAAAFPSACGKTNLAM+ PT+PG+KV+CVGDD
Sbjct: 427 SNIALKEGWLAEHMLIMALTNPEGKKKYIAAAFPSACGKTNLAMLKPTIPGWKVDCVGDD 486
Query: 183 IAWMKFDKDGVLRAINSENGFFGI 254
IAWM FDK G LRAIN E+GFFG+
Sbjct: 487 IAWMWFDKTGQLRAINPESGFFGV 510
Score = 98.3 bits (234), Expect = 5e-21
Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +2
Query: 254 SPGTSAATNPIAMATVFKNTVFTNVAETPEGGVWWEGMGPAPE--RLVDWKGQP-WDPSK 424
+PGTS TNP A+ T K+T+FTN A T +G WWEG+ P+ + W G+ W P
Sbjct: 511 APGTSMKTNPEALKTCLKDTIFTNTAMTSDGDFWWEGLPDPPKGVSITSWLGEENWSPES 570
Query: 425 KTPAAHPNSRFCTPAEQCPMIDGEWES 505
+ AAHPNSRFCTP+ C ++D +WE+
Sbjct: 571 GSKAAHPNSRFCTPSANCEIMDKDWEN 597
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1
Query: 508 EGVPISAILLGGRRPAGVPLVVESRDWQHGVFMGASMRSE 627
EGVPISAIL GGRRP GVPLV ++ +WQHGVF+ +S+ SE
Sbjct: 599 EGVPISAILFGGRRPRGVPLVYKAFNWQHGVFIASSLSSE 638
>SB_54941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 107 SLREDESRNDDANT-ARVQSRVRGGRHSLDEVRQGRRTAGHQL*KRVLWNSPGTSAATNP 283
SL+ED+ RND A + +R + V+ S+ + G GH L K N+P + T P
Sbjct: 24 SLKEDKPRNDTATSMSRCDTTVQPLLPSI-SIPCGLAPNGHDLNKSSKKNTPLSVGLTQP 82
Query: 284 IAMATVFKNTVFTNVAE 334
I A +F + E
Sbjct: 83 IPFAPPTSLPIFGSTRE 99
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 508 EGVPISAILLGGRRPAGVPLVVESRD 585
EG PIS++ G ++P+ VPLV S D
Sbjct: 451 EGYPISSLRPGNKKPSDVPLVGTSSD 476
>SB_8173| Best HMM Match : GreA_GreB_N (HMM E-Value=0.27)
Length = 488
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Frame = -1
Query: 515 TPSSSPTHRLSWDTALPGCRIWNLDVQPEFSCWGPRVDLSSRRGAP------ELVPCLPT 354
TPS S L D +PG R WN + Q P + R+G ++ PT
Sbjct: 338 TPSESDLPPLHKDPVMPGPR-WNSEPQLSRGGDEPLESFAPRQGETIDTNESQVTTPPPT 396
Query: 353 TPHPQVFPPR 324
T P V PPR
Sbjct: 397 TNQPSVLPPR 406
>SB_49186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1776
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 555 GRPSAAQQDGGYRHTLELSHSPSIMGHCSAGVQNLEFGCAAGVFLLGSQG*PF-QSTRRS 379
GRP +Q D H S++ + G +A + +FG ++ +L+ SQG +ST
Sbjct: 557 GRPGTSQVDVSNNHPSMTSYA--LFGSAAASPWSQDFGTSSEYWLMASQGQHVSESTLVR 614
Query: 378 GAGPMPSHHTPPSGVSAT 325
G G + + PS + T
Sbjct: 615 GRGDILISPSYPSALLET 632
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = -2
Query: 358 PPHPTLRCFRHVSEHGVFEHRRHCYRIRSG*RTW*IPKNPFSELM---ARSTPSLSNFIQ 188
PP T H HG + RRH + + + +L+ + STPS S+ +
Sbjct: 916 PPVSTFYHHHHHQHHGHYRRRRHYHHPYYPYYHQPYHHHQYHQLLISSSLSTPSTSSSLL 975
Query: 187 AMSSPTHSTLYPGSV 143
A +SPT + L G+V
Sbjct: 976 ASTSPTINYLSVGTV 990
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 359 EGMGPAPERLVDWKGQPWDPSKKTPAAHPN 448
+ +GP P DW + WD K A H N
Sbjct: 35 DSLGPWPSLTDDWDEESWDLEKAVAAMHRN 64
>SB_15898| Best HMM Match : Fork_head (HMM E-Value=0)
Length = 460
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -3
Query: 615 GSSHEHAVLPVPRLDYERYAGRPSAAQQDGGYRHTLELSHSPSIMGHCSAGVQ 457
GSS A+L PR ++Y+G P ++ Q ++ S S + H G++
Sbjct: 382 GSSQNTALLSSPRTPPQQYSGTPHSSLQGSRTSYSSSTSFSGNSSTHSVPGIK 434
>SB_58895| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1838
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = -2
Query: 490 VYHGTLLCRGAESGIWMCSRSFLAGVPGLTFPVDEALRSWSHAFPPHPTLRCFRHVSEHG 311
+Y L CRG E + C + VPG D + + + P H T R V G
Sbjct: 1383 IYLSALRCRGTEKSLVDCEHTGFHRVPGCDHIDDAGVVCANQSVPKHRT----RLVGGRG 1438
Query: 310 VFEHR 296
+E R
Sbjct: 1439 PYEGR 1443
>SB_52615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1154
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 608 PMNTPCCQSRDSTTSGTPAGRLPPSRMADIGTPSSSPTHR 489
P+ TP QS S+T AGR P S +A + SPT R
Sbjct: 180 PLKTPGNQSTVSSTR--IAGRSPQSTVASVTVEHDSPTQR 217
>SB_33574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 311 CF*TPSPLLSDS*RLTYLVNSKEPVFRVDGPQYAVLVELHPGYVVPHALYFVPGQCWRHH 132
CF P+ L+ S RL+ ++K P+F+ Y VL+E+ G +Y G W H+
Sbjct: 35 CFIGPA-LVVGSIRLSEKYDTK-PMFKTIEDVYEVLIEVERGIKERFRIYDTMGLNWTHN 92
>SB_33144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 452 RFCTPAEQCPMIDGEWESSRVCRYPPSCWAADGRP 556
RF P + P+ G +ES + PPS +A GRP
Sbjct: 314 RFGAPRAEPPIGRGRFESPAPQQAPPSRFAGGGRP 348
>SB_13565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 597
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 345 VGCGGKAWDQLRSASSTG 398
VGCGG A +Q+ +ASSTG
Sbjct: 435 VGCGGYADNQVAAASSTG 452
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 7.2
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Frame = -1
Query: 617 MEAPMNTPCCQSRDSTTSGTPAGRLPPSRMADIGTPSSSPTHRLSWDTAL-PGCRIWNLD 441
++ P NTP + S TP PPSR ++ P + P+ + + L P R N
Sbjct: 57 LKPPSNTPQQLTTPPHQSNTPRPLTPPSRQSNNPRPHTPPSCQSNTPRPLTPPPRQSNTT 116
Query: 440 VQPEFSCWGPRVDLSSRRGAP--ELVPCLPT------TPHPQVFPPR 324
P + PR + ++ P P PT TP P PPR
Sbjct: 117 QPPAYP---PRQSYALQQTTPLHTSQPLRPTPRRPSDTPQPFTPPPR 160
>SB_4879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -1
Query: 626 SDLMEAPMNTPCCQSRDSTTSGTPAGRLPPSRMADIGTPSSSPTH 492
S L + P + + +TTS T LP + A G P+ SP+H
Sbjct: 536 SSLSQPPPSKNQTTASITTTSTTGNPTLPQEQSATTGNPTPSPSH 580
>SB_33346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = -1
Query: 587 QSRDSTTSGTPAGRLP----PSRMADIGTP-SSSPTHRLSWDTALP 465
+ + +T S TPA RLP PS+ A P +S P+ + D ++P
Sbjct: 941 REKAATQSNTPASRLPPRGKPSKQARPNQPKASKPSKKAKHDQSIP 986
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,667,294
Number of Sequences: 59808
Number of extensions: 637480
Number of successful extensions: 2523
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2513
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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