Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0320
(440 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06477 Cluster: IFN-response element binding factor 2; ... 136 3e-31
UniRef50_Q8C671 Cluster: 0 day neonate head cDNA, RIKEN full-len... 116 2e-25
UniRef50_Q6NXQ0 Cluster: SFRS2 protein; n=4; Homo/Pan/Gorilla gr... 116 2e-25
UniRef50_Q9BRL6 Cluster: Splicing factor, arginine/serine-rich 2... 104 1e-21
UniRef50_Q09511 Cluster: Probable splicing factor, arginine/seri... 95 4e-19
UniRef50_UPI00005C16F5 Cluster: PREDICTED: similar to Sfrs2-prov... 77 2e-13
UniRef50_A4RXT9 Cluster: Predicted protein; n=1; Ostreococcus lu... 71 8e-12
UniRef50_Q018R2 Cluster: RSP4_CAEEL Probable splicing factor, ar... 70 3e-11
UniRef50_A7QII5 Cluster: Chromosome chr12 scaffold_103, whole ge... 69 4e-11
UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6; Mag... 68 1e-10
UniRef50_Q8II95 Cluster: Putative uncharacterized protein; n=1; ... 67 2e-10
UniRef50_UPI0000DBF0C6 Cluster: UPI0000DBF0C6 related cluster; n... 65 6e-10
UniRef50_A7ARN5 Cluster: Ser/Arg-rich splicing factor, putative;... 65 7e-10
UniRef50_A2APT2 Cluster: Novel protein; n=3; Murinae|Rep: Novel ... 64 1e-09
UniRef50_A5K4S8 Cluster: Putative uncharacterized protein; n=1; ... 63 2e-09
UniRef50_Q7RMQ4 Cluster: Dentin phosphoryn; n=5; Plasmodium (Vin... 62 5e-09
UniRef50_UPI0000D55448 Cluster: PREDICTED: similar to Splicing f... 62 7e-09
UniRef50_Q8WXF0 Cluster: 35 kDa SR repressor protein; n=18; Eute... 59 4e-08
UniRef50_Q9SEU4 Cluster: Serine/arginine-rich protein; n=22; Euk... 58 1e-07
UniRef50_Q9FYA9 Cluster: SC35-like splicing factor SCL30, 30 kD;... 58 1e-07
UniRef50_Q2QNB0 Cluster: RNA recognition motif family protein, e... 56 3e-07
UniRef50_Q5CF61 Cluster: Dentin phosphoryn; n=2; Cryptosporidium... 56 4e-07
UniRef50_O75494 Cluster: FUS-interacting serine-arginine-rich pr... 55 8e-07
UniRef50_A5KAW4 Cluster: Ser/Arg-rich splicing factor, putative;... 54 1e-06
UniRef50_Q1PDV2 Cluster: 28 kDa SC35-like splicing factor; n=9; ... 53 2e-06
UniRef50_Q4U9S0 Cluster: RNA-binding protein, putative; n=2; The... 52 5e-06
UniRef50_UPI000155BFA0 Cluster: PREDICTED: similar to FUSIP1 pro... 52 7e-06
UniRef50_Q8IIT2 Cluster: Nucleic acid binding factor, putative; ... 52 7e-06
UniRef50_Q9P4V6 Cluster: RNA-binding protein; n=3; Saccharomycet... 51 1e-05
UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of str... 51 1e-05
UniRef50_Q8DIY8 Cluster: RNA binding protein; n=3; Cyanobacteria... 50 2e-05
UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1; Op... 50 2e-05
UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protei... 50 2e-05
UniRef50_UPI0000D997C2 Cluster: PREDICTED: similar to FUS intera... 50 3e-05
UniRef50_Q9VVE5 Cluster: CG32169-PA; n=9; Endopterygota|Rep: CG3... 49 4e-05
UniRef50_A2E545 Cluster: Putative uncharacterized protein; n=1; ... 49 4e-05
UniRef50_O75821 Cluster: Eukaryotic translation initiation facto... 48 7e-05
UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1; Nitros... 48 9e-05
UniRef50_A2YR27 Cluster: Putative uncharacterized protein; n=3; ... 48 9e-05
UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459 ... 48 1e-04
UniRef50_UPI0000DB7622 Cluster: PREDICTED: similar to CG3335-PA;... 48 1e-04
UniRef50_Q8MYR4 Cluster: SD14970p; n=2; Drosophila melanogaster|... 48 1e-04
UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2... 48 1e-04
UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q2GTP8 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_A1DGG0 Cluster: Small subunit of nuclear cap-binding pr... 48 1e-04
UniRef50_P78795 Cluster: Probable eukaryotic translation initiat... 48 1e-04
UniRef50_Q9FIU6 Cluster: Similarity to RNA-binding protein; n=4;... 47 2e-04
UniRef50_A4RUB8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 47 2e-04
UniRef50_Q9P383 Cluster: Nuclear cap-binding complex small subun... 47 2e-04
UniRef50_Q96EP5 Cluster: DAZ-associated protein 1; n=39; Euteleo... 47 2e-04
UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome sh... 47 2e-04
UniRef50_A4RWB3 Cluster: Predicted protein; n=2; Ostreococcus|Re... 47 2e-04
UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein; ... 47 2e-04
UniRef50_Q4MZK1 Cluster: Nucleic acid binding factor, putative; ... 47 2e-04
UniRef50_A5K494 Cluster: Nucleic acid binding factor, putative; ... 47 2e-04
UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein, putat... 47 2e-04
UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10... 47 2e-04
UniRef50_UPI0000498562 Cluster: RNA-binding protein; n=1; Entamo... 46 3e-04
UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome sh... 46 3e-04
UniRef50_A7AT82 Cluster: RNA recognition motif containing protei... 46 3e-04
UniRef50_A5JZY0 Cluster: RNA binding protein, putative; n=2; Euk... 46 3e-04
UniRef50_Q2UQ21 Cluster: Predicted protein; n=3; Pezizomycotina|... 46 3e-04
UniRef50_P62995 Cluster: Splicing factor, arginine/serine-rich 1... 46 3e-04
UniRef50_Q9Y4C8 Cluster: Probable RNA-binding protein 19; n=30; ... 46 3e-04
UniRef50_UPI00015560CE Cluster: PREDICTED: similar to heterogene... 46 4e-04
UniRef50_Q5CX28 Cluster: RRM domain containing protein; T22E16.1... 46 4e-04
UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1; ... 46 4e-04
UniRef50_P09651 Cluster: Heterogeneous nuclear ribonucleoprotein... 46 4e-04
UniRef50_O14327 Cluster: Polyadenylate-binding protein 2 (Poly(A... 46 4e-04
UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN ... 46 5e-04
UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h... 46 5e-04
UniRef50_Q5TTQ2 Cluster: ENSANGP00000026814; n=3; Endopterygota|... 46 5e-04
UniRef50_Q5DF32 Cluster: SJCHGC06618 protein; n=2; Schistosoma j... 46 5e-04
UniRef50_Q23QD3 Cluster: Polyadenylate-binding protein 2; n=1; T... 46 5e-04
UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1; ... 46 5e-04
UniRef50_P51991 Cluster: Heterogeneous nuclear ribonucleoprotein... 46 5e-04
UniRef50_Q7ZWE3 Cluster: La-related protein 7; n=3; Clupeocephal... 46 5e-04
UniRef50_A7PHW6 Cluster: Chromosome chr13 scaffold_17, whole gen... 45 6e-04
UniRef50_Q6X9Z2 Cluster: HnRNP core protein A1; n=2; Laurasiathe... 45 6e-04
UniRef50_Q21911 Cluster: Putative uncharacterized protein msi-1;... 45 6e-04
UniRef50_Q08208 Cluster: Nucleolar protein 12; n=5; Saccharomyce... 45 6e-04
UniRef50_O43347 Cluster: RNA-binding protein Musashi homolog 1; ... 45 6e-04
UniRef50_UPI0000546443 Cluster: PREDICTED: hypothetical protein;... 45 8e-04
UniRef50_O45713 Cluster: Putative uncharacterized protein; n=5; ... 45 8e-04
UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11; Magnoliophyt... 44 0.001
UniRef50_Q6ID29 Cluster: At4g13860; n=9; cellular organisms|Rep:... 44 0.001
UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidop... 44 0.001
UniRef50_A7QJZ9 Cluster: Chromosome undetermined scaffold_109, w... 44 0.001
UniRef50_Q9VZE4 Cluster: CG1316-PA; n=5; Diptera|Rep: CG1316-PA ... 44 0.001
UniRef50_Q6ZR81 Cluster: CDNA FLJ46566 fis, clone THYMU3040829, ... 44 0.001
UniRef50_Q5KLP3 Cluster: Poly(A) binding protein, putative; n=1;... 44 0.001
UniRef50_Q14011 Cluster: Cold-inducible RNA-binding protein; n=6... 44 0.001
UniRef50_Q02AB7 Cluster: RNP-1 like RNA-binding protein; n=2; ce... 44 0.001
UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:... 44 0.001
UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH494... 44 0.001
UniRef50_Q7R874 Cluster: RNA recognition motif, putative; n=6; P... 44 0.001
UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Re... 44 0.001
UniRef50_P48810 Cluster: Heterogeneous nuclear ribonucleoprotein... 44 0.001
UniRef50_UPI00006CFFFC Cluster: RNA binding protein; n=1; Tetrah... 44 0.002
UniRef50_P73557 Cluster: RNA-binding protein; n=2; Chroococcales... 44 0.002
UniRef50_Q8I5N6 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_Q4UCX7 Cluster: RNA poly(A)-binding protein, putative; ... 44 0.002
UniRef50_Q24847 Cluster: Surface antigen protein; n=3; Entamoeba... 44 0.002
UniRef50_O44530 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A7SCX6 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.002
UniRef50_UPI00015B5DA3 Cluster: PREDICTED: similar to CG3335-PA;... 43 0.003
UniRef50_UPI00004996C0 Cluster: RNA-binding protein; n=1; Entamo... 43 0.003
UniRef50_Q66IT0 Cluster: MGC84815 protein; n=1; Xenopus laevis|R... 43 0.003
UniRef50_O35698 Cluster: RNA-binding protein; n=7; Mus musculus|... 43 0.003
UniRef50_Q9SJT4 Cluster: Expressed protein; n=1; Arabidopsis tha... 43 0.003
UniRef50_Q9CAE4 Cluster: Putative uncharacterized protein F13M14... 43 0.003
UniRef50_Q0ITI7 Cluster: Os11g0250000 protein; n=5; Oryza sativa... 43 0.003
UniRef50_Q6PNM9 Cluster: AUF1 similar protein; n=3; Paracentrotu... 43 0.003
UniRef50_A7SCR4 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.003
UniRef50_Q8IY53 Cluster: Putative uncharacterized protein; n=1; ... 43 0.003
UniRef50_Q8TBF4 Cluster: Zinc finger CCHC-type and RNA-binding m... 43 0.003
UniRef50_Q13148 Cluster: TAR DNA-binding protein 43; n=36; Coelo... 43 0.003
UniRef50_Q22037 Cluster: Heterogeneous nuclear ribonucleoprotein... 43 0.003
UniRef50_Q8IUH3 Cluster: RNA-binding protein 45; n=27; Euteleost... 43 0.003
UniRef50_UPI0000E47947 Cluster: PREDICTED: similar to GA10247-PA... 43 0.003
UniRef50_UPI000023E598 Cluster: hypothetical protein FG10156.1; ... 43 0.003
UniRef50_Q6DRI6 Cluster: KIAA0682-like; n=7; Danio rerio|Rep: KI... 43 0.003
UniRef50_Q9LU62 Cluster: Similarity to poly(A)-binding protein I... 43 0.003
UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2; Ostreococcus... 43 0.003
UniRef50_Q9U5E3 Cluster: CiMsi; n=1; Ciona intestinalis|Rep: CiM... 43 0.003
UniRef50_Q93233 Cluster: Putative uncharacterized protein pabp-2... 43 0.003
UniRef50_A7SIF0 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.003
UniRef50_Q13595 Cluster: Transformer-2 protein homolog; n=57; Eu... 43 0.003
UniRef50_P41891 Cluster: Protein gar2; n=12; Ascomycota|Rep: Pro... 43 0.003
UniRef50_Q6VYI5 Cluster: TARDBP S8; n=8; Coelomata|Rep: TARDBP S... 42 0.004
UniRef50_Q05C33 Cluster: Tardbp protein; n=14; Coelomata|Rep: Ta... 42 0.004
UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP... 42 0.004
UniRef50_Q8I2R8 Cluster: RNA-binding protein, putative; n=5; Pla... 42 0.004
UniRef50_Q54CU2 Cluster: RNA-binding region-containing protein; ... 42 0.004
UniRef50_Q4PBV1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.004
UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n... 42 0.004
UniRef50_A6RJZ8 Cluster: Putative uncharacterized protein; n=2; ... 42 0.004
UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;... 42 0.004
UniRef50_UPI0000DB6DF2 Cluster: PREDICTED: similar to squid CG16... 42 0.006
UniRef50_UPI00005A129E Cluster: PREDICTED: similar to Heterogene... 42 0.006
UniRef50_Q1LVU9 Cluster: Cold inducible RNA binding protein; n=8... 42 0.006
UniRef50_Q7XGR3 Cluster: RNA recognition motif family protein, e... 42 0.006
UniRef50_Q17DU7 Cluster: RNA binding motif protein; n=3; Culicid... 42 0.006
UniRef50_Q6FQ16 Cluster: Candida glabrata strain CBS138 chromoso... 42 0.006
UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41... 42 0.006
UniRef50_UPI000051A8B9 Cluster: PREDICTED: similar to CG1316-PA;... 42 0.008
UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidop... 42 0.008
UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:... 42 0.008
UniRef50_Q10RZ0 Cluster: RNA recognition motif family protein, e... 42 0.008
UniRef50_A7PNS9 Cluster: Chromosome chr8 scaffold_23, whole geno... 42 0.008
UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus lu... 42 0.008
UniRef50_Q5CWM4 Cluster: U2 snRNP. Hsh49p, RRM domain containing... 42 0.008
UniRef50_A7RXI1 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.008
UniRef50_A7RU25 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.008
UniRef50_Q1DZF7 Cluster: Putative uncharacterized protein; n=1; ... 42 0.008
UniRef50_A7TPL8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.008
UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplas... 42 0.008
UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=7... 42 0.008
UniRef50_Q2JXW7 Cluster: Putative RNA-binding protein; n=2; Syne... 41 0.010
UniRef50_Q0F212 Cluster: RNA-binding region RNP-1; n=1; Mariprof... 41 0.010
UniRef50_Q9SVM7 Cluster: RNA-binding protein like; n=1; Arabidop... 41 0.010
UniRef50_Q5K249 Cluster: Putative glycine-rich RNA-binding prote... 41 0.010
UniRef50_Q1PEP5 Cluster: Nucleolin; n=2; Arabidopsis thaliana|Re... 41 0.010
UniRef50_Q01B63 Cluster: RNA recognition motif; n=2; Ostreococcu... 41 0.010
UniRef50_A7P058 Cluster: Chromosome chr6 scaffold_3, whole genom... 41 0.010
UniRef50_A3AAN7 Cluster: Putative uncharacterized protein; n=2; ... 41 0.010
UniRef50_Q95ZH1 Cluster: RBD protein; n=1; Chironomus tentans|Re... 41 0.010
UniRef50_Q5DH48 Cluster: SJCHGC06087 protein; n=1; Schistosoma j... 41 0.010
UniRef50_Q5CWK5 Cluster: 5x RRM. Mrd1p like, splicing related; n... 41 0.010
UniRef50_Q1HE01 Cluster: Cbp20; n=6; Eukaryota|Rep: Cbp20 - Bomb... 41 0.010
UniRef50_A7RLV0 Cluster: Predicted protein; n=1; Nematostella ve... 41 0.010
UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia japon... 41 0.010
UniRef50_A0CBK1 Cluster: Chromosome undetermined scaffold_164, w... 41 0.010
UniRef50_Q5KC60 Cluster: Polyadenylation factor 64 kDa subunit, ... 41 0.010
UniRef50_A2QMQ9 Cluster: Function: AUF1 of H. sapiens is a compo... 41 0.010
UniRef50_Q09301 Cluster: Putative RNA-binding protein EEED8.12; ... 41 0.010
UniRef50_P19339 Cluster: Protein sex-lethal; n=41; Diptera|Rep: ... 41 0.010
UniRef50_Q57014 Cluster: Putative RNA-binding protein rbpA; n=70... 41 0.010
UniRef50_Q4SJ02 Cluster: Chromosome 21 SCAF14577, whole genome s... 41 0.014
UniRef50_Q7NHK5 Cluster: RNA-binding protein; n=10; cellular org... 41 0.014
UniRef50_Q6AWW6 Cluster: At2g47310; n=2; Arabidopsis thaliana|Re... 41 0.014
UniRef50_Q67W00 Cluster: Putative RRM-containing protein; n=2; O... 41 0.014
UniRef50_A7QT53 Cluster: Chromosome undetermined scaffold_165, w... 41 0.014
UniRef50_A7P7U7 Cluster: Chromosome chr3 scaffold_8, whole genom... 41 0.014
UniRef50_Q86EX2 Cluster: Clone ZZD1336 mRNA sequence; n=1; Schis... 41 0.014
UniRef50_Q3HM26 Cluster: Sex-lethal isoform 1; n=4; Bombyx mori|... 41 0.014
UniRef50_A7AWX7 Cluster: RNA recognition motif. (A.k.a. RRM, RBD... 41 0.014
UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, wh... 41 0.014
UniRef50_Q7SGB3 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 41 0.014
UniRef50_Q7RXY7 Cluster: Putative uncharacterized protein NCU004... 41 0.014
UniRef50_Q0CIN3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.014
UniRef50_Q06106 Cluster: Multiple RNA-binding domain-containing ... 41 0.014
UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein... 41 0.014
UniRef50_Q15717 Cluster: ELAV-like protein 1; n=28; Tetrapoda|Re... 41 0.014
UniRef50_UPI0000E4A86C Cluster: PREDICTED: hypothetical protein,... 40 0.018
UniRef50_UPI0000E47201 Cluster: PREDICTED: similar to developmen... 40 0.018
UniRef50_Q9FX45 Cluster: RNA-binding glycine-rich protein, putat... 40 0.018
UniRef50_Q9FFZ6 Cluster: Similarity to RNA-binding protein; n=2;... 40 0.018
UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6; c... 40 0.018
UniRef50_O81989 Cluster: Cp33Hv; n=4; BEP clade|Rep: Cp33Hv - Ho... 40 0.018
UniRef50_A7NUC5 Cluster: Chromosome chr18 scaffold_1, whole geno... 40 0.018
UniRef50_Q5BT94 Cluster: SJCHGC02233 protein; n=2; Bilateria|Rep... 40 0.018
UniRef50_Q4QA46 Cluster: RNA-binding protein, putative, UPB1; n=... 40 0.018
UniRef50_Q75E07 Cluster: ABL134Cp; n=1; Eremothecium gossypii|Re... 40 0.018
UniRef50_Q2H622 Cluster: Putative uncharacterized protein; n=1; ... 40 0.018
UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22; Endopt... 40 0.018
UniRef50_Q9BX46 Cluster: RNA-binding protein 24; n=52; Eumetazoa... 40 0.018
UniRef50_Q4WJT7 Cluster: Multiple RNA-binding domain-containing ... 40 0.018
UniRef50_UPI000049956B Cluster: RNA-binding protein; n=1; Entamo... 40 0.024
UniRef50_UPI000065DEA8 Cluster: RNA-binding protein 24 (RNA-bind... 40 0.024
UniRef50_Q569S7 Cluster: LOC443584 protein; n=5; Xenopus|Rep: LO... 40 0.024
UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1; Tre... 40 0.024
UniRef50_Q4UFE0 Cluster: Nucleolar, RNA-binding protein, putativ... 40 0.024
UniRef50_Q4QHE5 Cluster: Putative uncharacterized protein; n=3; ... 40 0.024
UniRef50_Q4QE23 Cluster: Putative uncharacterized protein; n=3; ... 40 0.024
UniRef50_Q245K5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.024
UniRef50_A7AW01 Cluster: RNA recognition motif domain containing... 40 0.024
UniRef50_A0BZZ4 Cluster: Chromosome undetermined scaffold_14, wh... 40 0.024
UniRef50_A6NDY0 Cluster: Uncharacterized protein ENSP00000367609... 40 0.024
UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1; ... 40 0.024
UniRef50_A5DDT0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.024
UniRef50_P19684 Cluster: 33 kDa ribonucleoprotein, chloroplast p... 40 0.024
UniRef50_Q6CEW9 Cluster: Multiple RNA-binding domain-containing ... 40 0.024
UniRef50_O13620 Cluster: Multiple RNA-binding domain-containing ... 40 0.024
UniRef50_Q39SC4 Cluster: RNA-binding region RNP-1; n=2; Geobacte... 40 0.031
UniRef50_Q9LNV4 Cluster: F22G5.31; n=12; Magnoliophyta|Rep: F22G... 40 0.031
UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1; ... 40 0.031
UniRef50_Q67XI5 Cluster: Putative uncharacterized protein At4g20... 40 0.031
UniRef50_Q2I310 Cluster: RNA recognition motif-containing protei... 40 0.031
UniRef50_A7NYH5 Cluster: Chromosome chr6 scaffold_3, whole genom... 40 0.031
UniRef50_A5BUJ6 Cluster: Putative uncharacterized protein; n=1; ... 40 0.031
UniRef50_Q9XU67 Cluster: Putative uncharacterized protein rbd-1;... 40 0.031
UniRef50_Q9XTZ2 Cluster: Putative uncharacterized protein rsp-8;... 40 0.031
UniRef50_Q9UAF2 Cluster: Musashi; n=1; Halocynthia roretzi|Rep: ... 40 0.031
UniRef50_Q8WSM6 Cluster: Putative uncharacterized protein; n=4; ... 40 0.031
UniRef50_Q8IE99 Cluster: Splicing factor, putative; n=1; Plasmod... 40 0.031
UniRef50_Q5CRV5 Cluster: SPAC25G10.01-like RRM domain containing... 40 0.031
UniRef50_Q5BYS2 Cluster: SJCHGC02231 protein; n=3; Schistosoma j... 40 0.031
UniRef50_Q5BW90 Cluster: SJCHGC05136 protein; n=1; Schistosoma j... 40 0.031
UniRef50_Q57YP5 Cluster: RNA-binding protein, putative; n=1; Try... 40 0.031
UniRef50_A7AN88 Cluster: RNA recognition motif domain containing... 40 0.031
UniRef50_A5K747 Cluster: RNA binding protein, putative; n=4; Pla... 40 0.031
UniRef50_A0E382 Cluster: Chromosome undetermined scaffold_76, wh... 40 0.031
UniRef50_Q5K9M4 Cluster: Eukaryotic translation initiation facto... 40 0.031
UniRef50_A1DIK1 Cluster: Translation initiation factor 4B; n=8; ... 40 0.031
UniRef50_Q9H0Z9 Cluster: RNA-binding protein 38; n=16; Eutheria|... 40 0.031
UniRef50_Q86U42 Cluster: Polyadenylate-binding protein 2 (Poly(A... 40 0.031
UniRef50_UPI00015B6013 Cluster: PREDICTED: similar to GA12086-PA... 39 0.041
UniRef50_UPI0000E4688E Cluster: PREDICTED: similar to La ribonuc... 39 0.041
UniRef50_UPI0000D9F579 Cluster: PREDICTED: similar to testes-spe... 39 0.041
UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1; ... 39 0.041
UniRef50_Q9XFD1 Cluster: Nuclear cap-binding protein; n=16; Euka... 39 0.041
UniRef50_Q8RWQ1 Cluster: At2g44720/F16B22.21; n=5; Magnoliophyta... 39 0.041
UniRef50_A2YAR8 Cluster: Putative uncharacterized protein; n=1; ... 39 0.041
UniRef50_Q5CHR5 Cluster: Nuclear cap-binding protein; n=3; Crypt... 39 0.041
UniRef50_Q5BXS3 Cluster: SJCHGC01369 protein; n=2; Schistosoma j... 39 0.041
UniRef50_O76876 Cluster: CG3056-PA, isoform A; n=3; Neoptera|Rep... 39 0.041
UniRef50_Q9Y7Y3 Cluster: RNA-binding protein; n=1; Schizosacchar... 39 0.041
UniRef50_Q5KP81 Cluster: Transformer-2-beta isoform 3, putative;... 39 0.041
UniRef50_Q5KBA9 Cluster: Putative uncharacterized protein; n=1; ... 39 0.041
UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein... 39 0.041
UniRef50_Q4PC17 Cluster: Multiple RNA-binding domain-containing ... 39 0.041
UniRef50_O14979 Cluster: Heterogeneous nuclear ribonucleoprotein... 39 0.041
UniRef50_O04425 Cluster: Flowering time control protein FCA; n=1... 39 0.041
UniRef50_UPI0000E45F82 Cluster: PREDICTED: hypothetical protein;... 39 0.055
UniRef50_UPI0000515DAB Cluster: PREDICTED: similar to Polyadenyl... 39 0.055
UniRef50_Q7U7Q8 Cluster: PutativeRNA-binding protein RbpD; n=9; ... 39 0.055
UniRef50_Q48A10 Cluster: RNA-binding protein; n=2; Alteromonadal... 39 0.055
UniRef50_Q3B6Q3 Cluster: RNA-binding region RNP-1; n=6; Chlorobi... 39 0.055
UniRef50_A0WC53 Cluster: RNA-binding region RNP-1; n=2; Desulfur... 39 0.055
UniRef50_Q9LNP1 Cluster: F1L3.34; n=2; Arabidopsis thaliana|Rep:... 39 0.055
UniRef50_Q9FIB8 Cluster: Splicing factor-like protein; n=12; Mag... 39 0.055
UniRef50_Q8RWN5 Cluster: RNA-binding protein-like; n=3; Arabidop... 39 0.055
UniRef50_Q10N14 Cluster: RNA recognition motif family protein, e... 39 0.055
UniRef50_Q018A5 Cluster: Putativ; n=2; Ostreococcus|Rep: Putativ... 39 0.055
UniRef50_O24306 Cluster: Ribonucleoprotein; n=3; Pisum sativum|R... 39 0.055
UniRef50_A7P2N7 Cluster: Chromosome chr1 scaffold_5, whole genom... 39 0.055
UniRef50_A4RZ05 Cluster: Predicted protein; n=1; Ostreococcus lu... 39 0.055
UniRef50_Q9W4X7 Cluster: CG8636-PA; n=8; Endopterygota|Rep: CG86... 39 0.055
UniRef50_Q7RIJ3 Cluster: RNA recognition motif, putative; n=3; P... 39 0.055
UniRef50_Q5CFP8 Cluster: Poly(A) binding protein II; n=2; Crypto... 39 0.055
UniRef50_Q57W18 Cluster: RNA-binding protein, putative; n=1; Try... 39 0.055
UniRef50_Q553V5 Cluster: Putative uncharacterized protein; n=4; ... 39 0.055
UniRef50_Q4FXS0 Cluster: RNA-binding protein, putative; n=3; Lei... 39 0.055
UniRef50_A2EQG8 Cluster: Putative uncharacterized protein; n=1; ... 39 0.055
UniRef50_A2EJG8 Cluster: Putative uncharacterized protein; n=1; ... 39 0.055
UniRef50_Q16560 Cluster: U1-snRNP binding protein homolog; n=29;... 39 0.055
UniRef50_Q6CC04 Cluster: Yarrowia lipolytica chromosome C of str... 39 0.055
UniRef50_Q4PI99 Cluster: Putative uncharacterized protein; n=1; ... 39 0.055
UniRef50_O94290 Cluster: RNA-binding protein Cwf29; n=1; Schizos... 39 0.055
UniRef50_Q9NW13 Cluster: RNA-binding protein 28; n=26; Euteleost... 39 0.055
UniRef50_P48809 Cluster: Heterogeneous nuclear ribonucleoprotein... 39 0.055
UniRef50_O13741 Cluster: Nucleolar protein 12; n=1; Schizosaccha... 39 0.055
UniRef50_Q19706 Cluster: Probable eukaryotic translation initiat... 39 0.055
UniRef50_UPI0000DB6D53 Cluster: PREDICTED: similar to CG32169-PA... 38 0.072
UniRef50_UPI0000D5737C Cluster: PREDICTED: similar to RNA bindin... 38 0.072
UniRef50_UPI00005A4DCF Cluster: PREDICTED: similar to Heterogene... 38 0.072
UniRef50_Q6IRQ4 Cluster: MGC82187 protein; n=6; Tetrapoda|Rep: M... 38 0.072
UniRef50_Q83D11 Cluster: RNA-binding protein; n=3; Coxiella burn... 38 0.072
UniRef50_Q7MWI3 Cluster: RNA-binding protein; n=5; Bacteroidetes... 38 0.072
UniRef50_Q74DJ2 Cluster: RNA-binding protein; n=2; Geobacter|Rep... 38 0.072
UniRef50_Q5ZYW0 Cluster: RNA binding protein, cold-inducible rrm... 38 0.072
UniRef50_A6GJJ1 Cluster: Probable nucleic acid-binding protein; ... 38 0.072
UniRef50_A3XSE7 Cluster: RNA-binding protein; n=23; Gammaproteob... 38 0.072
UniRef50_A0HBM8 Cluster: RNA-binding region RNP-1; n=1; Comamona... 38 0.072
UniRef50_Q9SM01 Cluster: RNA binding protein; n=2; Arabidopsis t... 38 0.072
UniRef50_Q501B0 Cluster: At2g46780; n=3; core eudicotyledons|Rep... 38 0.072
UniRef50_Q0D9E5 Cluster: Os06g0724600 protein; n=3; Oryza sativa... 38 0.072
UniRef50_A7QE05 Cluster: Chromosome chr4 scaffold_83, whole geno... 38 0.072
UniRef50_A3BFI4 Cluster: Putative uncharacterized protein; n=4; ... 38 0.072
UniRef50_A2XEH7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.072
UniRef50_Q9VDI8 Cluster: CG17838-PD, isoform D; n=11; Endopteryg... 38 0.072
UniRef50_Q54WM9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.072
UniRef50_Q4QAF2 Cluster: Putative uncharacterized protein; n=5; ... 38 0.072
UniRef50_A7ST95 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.072
UniRef50_A0DWV5 Cluster: Chromosome undetermined scaffold_67, wh... 38 0.072
UniRef50_Q9HEH4 Cluster: Related to heterogeneous nuclear ribonu... 38 0.072
UniRef50_Q8SSA1 Cluster: NUCLEOLAR PROTEIN OF THE GAR FAMILY; n=... 38 0.072
UniRef50_Q5KPK3 Cluster: Putative uncharacterized protein; n=2; ... 38 0.072
UniRef50_Q0U9M6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.072
UniRef50_Q02926 Cluster: Ribonucleoprotein RB97D; n=7; Sophophor... 38 0.072
UniRef50_Q8WXF1 Cluster: Paraspeckle component 1; n=27; Euteleos... 38 0.072
UniRef50_Q99383 Cluster: Nuclear polyadenylated RNA-binding prot... 38 0.072
UniRef50_UPI00015B5E10 Cluster: PREDICTED: similar to CG4806-PA;... 38 0.096
UniRef50_UPI0000DB7056 Cluster: PREDICTED: similar to RNA bindin... 38 0.096
UniRef50_UPI0000498AD7 Cluster: enhancer binding protein 2; n=1;... 38 0.096
UniRef50_Q6MCT2 Cluster: Probable nucleic acid-binding protein; ... 38 0.096
UniRef50_Q1IV44 Cluster: RNA-binding protein, RNP-1; n=2; Bacter... 38 0.096
UniRef50_Q11SF1 Cluster: RNA binding protein; n=6; Bacteria|Rep:... 38 0.096
UniRef50_Q0EVV9 Cluster: RNA-binding protein; n=1; Mariprofundus... 38 0.096
UniRef50_A4CFR2 Cluster: Putative uncharacterized protein; n=3; ... 38 0.096
UniRef50_A1SSM5 Cluster: RNP-1 like RNA-binding protein precurso... 38 0.096
UniRef50_Q9ZUJ3 Cluster: T2K10.5 protein; n=3; Magnoliophyta|Rep... 38 0.096
UniRef50_Q1ENZ5 Cluster: RNA-binding protein, putative; n=2; Mag... 38 0.096
UniRef50_Q0IYS7 Cluster: Os10g0167500 protein; n=4; Oryza sativa... 38 0.096
UniRef50_A7PIB0 Cluster: Chromosome chr13 scaffold_17, whole gen... 38 0.096
UniRef50_A3C5F0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.096
UniRef50_A2YWJ2 Cluster: Putative uncharacterized protein; n=3; ... 38 0.096
UniRef50_Q4N6Y8 Cluster: RNA-binding protein, putative; n=2; The... 38 0.096
UniRef50_A7SM09 Cluster: Predicted protein; n=4; Eumetazoa|Rep: ... 38 0.096
UniRef50_A7RRA7 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.096
UniRef50_A5K320 Cluster: Splicing factor, putative; n=5; Plasmod... 38 0.096
UniRef50_Q7SFZ5 Cluster: Putative uncharacterized protein NCU030... 38 0.096
UniRef50_Q76IQ0 Cluster: Putative uncharacterized protein SGN1; ... 38 0.096
UniRef50_Q5KP11 Cluster: Single-stranded DNA binding protein, pu... 38 0.096
UniRef50_A5DYR4 Cluster: Putative uncharacterized protein; n=5; ... 38 0.096
UniRef50_A3LZT4 Cluster: Predicted protein; n=1; Pichia stipitis... 38 0.096
UniRef50_Q14498 Cluster: RNA-binding protein 39; n=55; Euteleost... 38 0.096
UniRef50_UPI00015B552E Cluster: PREDICTED: similar to bruno; n=1... 38 0.13
UniRef50_Q9M383 Cluster: Putative uncharacterized protein F24B22... 38 0.13
UniRef50_Q6YWP9 Cluster: RNA recognition motif (RRM)-containing ... 38 0.13
UniRef50_Q2QKB8 Cluster: Alternative splicing regulator; n=2; Ma... 38 0.13
UniRef50_A7Q8S8 Cluster: Chromosome chr5 scaffold_64, whole geno... 38 0.13
UniRef50_A7PZY6 Cluster: Chromosome chr8 scaffold_41, whole geno... 38 0.13
UniRef50_A3AB12 Cluster: Putative uncharacterized protein; n=1; ... 38 0.13
UniRef50_Q9VFT3 Cluster: CG9654-PA; n=4; Drosophila melanogaster... 38 0.13
UniRef50_Q86ER1 Cluster: Clone ZZD1516 mRNA sequence; n=2; Schis... 38 0.13
UniRef50_Q7RS26 Cluster: Eukaryotic translation initiation facto... 38 0.13
UniRef50_Q5TVV0 Cluster: ENSANGP00000028861; n=2; Culicidae|Rep:... 38 0.13
UniRef50_Q4W5P0 Cluster: Homologous to drosophila sqd (Squid) pr... 38 0.13
UniRef50_Q4UHB5 Cluster: RNA-binding protein, putative; n=2; The... 38 0.13
UniRef50_Q1JTC8 Cluster: Eukaryotic translation initiation facto... 38 0.13
UniRef50_O45189 Cluster: Suppressor protein 12; n=2; Caenorhabdi... 38 0.13
UniRef50_Q6CHX5 Cluster: Similar to sp|P53883 Saccharomyces cere... 38 0.13
UniRef50_Q6BMT1 Cluster: Similar to CA5935|IPF2798 Candida albic... 38 0.13
UniRef50_Q2HG12 Cluster: Putative uncharacterized protein; n=2; ... 38 0.13
UniRef50_A6SJV1 Cluster: Putative uncharacterized protein; n=2; ... 38 0.13
UniRef50_P31483 Cluster: Nucleolysin TIA-1 isoform p40 (RNA-bind... 38 0.13
UniRef50_UPI00015B48C0 Cluster: PREDICTED: similar to LOC443584 ... 37 0.17
UniRef50_UPI0001560A8A Cluster: PREDICTED: hypothetical protein;... 37 0.17
UniRef50_UPI0000F2CBBE Cluster: PREDICTED: similar to musashi ho... 37 0.17
UniRef50_UPI0000E4934F Cluster: PREDICTED: similar to musashi nr... 37 0.17
UniRef50_UPI0000E45F83 Cluster: PREDICTED: similar to neurotryps... 37 0.17
UniRef50_UPI0000D9F28C Cluster: PREDICTED: similar to poly(A)bin... 37 0.17
UniRef50_UPI0000498FA8 Cluster: peptidyl prolyl cis-trans isomer... 37 0.17
UniRef50_UPI000065FE7B Cluster: RNA-binding protein 38 (RNA-bind... 37 0.17
UniRef50_Q4SRQ3 Cluster: Chromosome undetermined SCAF14504, whol... 37 0.17
UniRef50_Q83CD7 Cluster: Nucleic acid binding domain protein; n=... 37 0.17
UniRef50_A3J7P1 Cluster: RNA-binding protein; n=4; Gammaproteoba... 37 0.17
UniRef50_Q9FM47 Cluster: Similarity to RNA binding protein; n=5;... 37 0.17
UniRef50_Q762A1 Cluster: BRI1-KD interacting protein 113; n=4; O... 37 0.17
UniRef50_Q69IN4 Cluster: Ribonucleoprotein antigen-like; n=5; Ma... 37 0.17
UniRef50_Q5JJM4 Cluster: Peptidylprolyl cis-trans isomerase-like... 37 0.17
UniRef50_Q531A8 Cluster: FCA gamma; n=1; Pisum sativum|Rep: FCA ... 37 0.17
UniRef50_Q494N5 Cluster: At4g35785; n=6; Embryophyta|Rep: At4g35... 37 0.17
UniRef50_A7QLH7 Cluster: Chromosome undetermined scaffold_119, w... 37 0.17
UniRef50_A5BIG2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.17
UniRef50_Q8IMX4 Cluster: CG5422-PD, isoform D; n=14; Endopterygo... 37 0.17
UniRef50_Q4N8H4 Cluster: RNA-binding protein, putative; n=2; The... 37 0.17
UniRef50_Q5JUB2 Cluster: ELAV (Embryonic lethal, abnormal vision... 37 0.17
UniRef50_Q59G98 Cluster: TIA1 protein variant; n=5; Euteleostomi... 37 0.17
UniRef50_Q9C222 Cluster: Putative uncharacterized protein B8L3.0... 37 0.17
UniRef50_A5E774 Cluster: Putative uncharacterized protein; n=1; ... 37 0.17
UniRef50_O13845 Cluster: RNA-binding protein rsd1; n=1; Schizosa... 37 0.17
UniRef50_UPI00015B431A Cluster: PREDICTED: similar to ZCRB1 prot... 37 0.22
UniRef50_UPI0000E4800D Cluster: PREDICTED: similar to RNA bindin... 37 0.22
UniRef50_UPI0000E475F4 Cluster: PREDICTED: similar to TRNA selen... 37 0.22
UniRef50_UPI00005A96C6 Cluster: PREDICTED: similar to Heterogene... 37 0.22
UniRef50_UPI0000211FC5 Cluster: PREDICTED: RNA binding motif pro... 37 0.22
UniRef50_Q5PPI5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.22
UniRef50_A5KRV2 Cluster: RNP-1 like RNA-binding protein; n=1; ca... 37 0.22
UniRef50_A0KRK6 Cluster: RNP-1-like RNA-binding protein; n=14; S... 37 0.22
UniRef50_Q9FVQ1 Cluster: NuM1 protein, putative; n=2; Arabidopsi... 37 0.22
UniRef50_Q7XI13 Cluster: Glycine-rich RNA-binding protein-like; ... 37 0.22
UniRef50_Q7XDI5 Cluster: RNA recognition motif family protein, e... 37 0.22
UniRef50_Q6XJQ7 Cluster: FCA protein; n=86; BEP clade|Rep: FCA p... 37 0.22
UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recogniti... 37 0.22
UniRef50_A7PCC5 Cluster: Chromosome chr2 scaffold_11, whole geno... 37 0.22
UniRef50_A2X750 Cluster: Putative uncharacterized protein; n=3; ... 37 0.22
UniRef50_A2X1B7 Cluster: Putative uncharacterized protein; n=2; ... 37 0.22
UniRef50_Q8ILQ0 Cluster: Spliceosome-associated protein, putativ... 37 0.22
UniRef50_Q5CXI3 Cluster: U1 snrp Snp1p. RRM domain containing pr... 37 0.22
UniRef50_Q5CLX5 Cluster: Poly(A)-binding protein fabm; n=3; Cryp... 37 0.22
UniRef50_Q55C97 Cluster: Putative uncharacterized protein; n=1; ... 37 0.22
UniRef50_Q54GS2 Cluster: Putative uncharacterized protein; n=1; ... 37 0.22
UniRef50_Q54G90 Cluster: Putative uncharacterized protein; n=1; ... 37 0.22
UniRef50_Q54CU3 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 37 0.22
UniRef50_Q4D4H5 Cluster: Putative uncharacterized protein; n=2; ... 37 0.22
UniRef50_Q23RL2 Cluster: Nucleolar phosphoprotein, putative; n=2... 37 0.22
UniRef50_A7T0E1 Cluster: Predicted protein; n=4; Nematostella ve... 37 0.22
UniRef50_A7AQH9 Cluster: Translation initiation factor 3 subunit... 37 0.22
UniRef50_A2DHI9 Cluster: Putative uncharacterized protein; n=1; ... 37 0.22
UniRef50_Q9Y7A8 Cluster: Pad-1; n=18; Pezizomycotina|Rep: Pad-1 ... 37 0.22
UniRef50_Q96V40 Cluster: Peptidyl-prolyl cis-trans isomerase; n=... 37 0.22
UniRef50_Q7S1F3 Cluster: Predicted protein; n=4; Pezizomycotina|... 37 0.22
UniRef50_Q7S0E6 Cluster: Putative uncharacterized protein NCU099... 37 0.22
UniRef50_Q6BL35 Cluster: Debaryomyces hansenii chromosome F of s... 37 0.22
UniRef50_O13829 Cluster: U1 snRNP-associated protein Usp101; n=1... 37 0.22
UniRef50_A5DUI5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.22
UniRef50_A3LZJ7 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 37 0.22
UniRef50_P40561 Cluster: RNA-binding protein SGN1; n=2; Saccharo... 37 0.22
UniRef50_Q00916 Cluster: U1 small nuclear ribonucleoprotein 70 k... 37 0.22
UniRef50_Q7SG09 Cluster: Multiple RNA-binding domain-containing ... 37 0.22
UniRef50_P26378 Cluster: ELAV-like protein 4; n=100; Euteleostom... 37 0.22
UniRef50_Q4T2L5 Cluster: Chromosome undetermined SCAF10235, whol... 36 0.29
UniRef50_A6VVI5 Cluster: RNP-1 like RNA-binding protein; n=3; Ga... 36 0.29
UniRef50_Q9LIH1 Cluster: Genomic DNA, chromosome 3, P1 clone:MFD... 36 0.29
UniRef50_Q8W034 Cluster: Ribonucleoprotein 1; n=5; core eudicoty... 36 0.29
UniRef50_Q014L5 Cluster: Cyclophilin-type peptidyl-prolyl cis-tr... 36 0.29
UniRef50_A5BSV4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.29
UniRef50_A3BDN9 Cluster: Putative uncharacterized protein; n=3; ... 36 0.29
UniRef50_Q7Q615 Cluster: ENSANGP00000020466; n=1; Anopheles gamb... 36 0.29
UniRef50_Q4N5B6 Cluster: Spliceosome associated protein, putativ... 36 0.29
UniRef50_A4V6K1 Cluster: DAZ-associated protein; n=2; Platyhelmi... 36 0.29
UniRef50_A2EWD1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.29
UniRef50_Q6FIQ5 Cluster: Candida glabrata strain CBS138 chromoso... 36 0.29
UniRef50_Q6CQW2 Cluster: Similarities with sp|Q8J1F4 Ashbya goss... 36 0.29
UniRef50_Q5KIS6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.29
UniRef50_A7F1A0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.29
UniRef50_A6S535 Cluster: Putative uncharacterized protein; n=2; ... 36 0.29
UniRef50_Q01085 Cluster: Nucleolysin TIAR; n=67; Euteleostomi|Re... 36 0.29
UniRef50_Q5AJS6 Cluster: Multiple RNA-binding domain-containing ... 36 0.29
UniRef50_O75526 Cluster: RNA-binding motif protein, X-linked-lik... 36 0.29
UniRef50_UPI0000E1183F Cluster: hypothetical protein OM2255_1662... 36 0.39
UniRef50_UPI00004997F9 Cluster: RNA-binding protein; n=1; Entamo... 36 0.39
UniRef50_UPI0000EB42F3 Cluster: UPI0000EB42F3 related cluster; n... 36 0.39
UniRef50_Q9SYP9 Cluster: F9H16.14 protein; n=6; core eudicotyled... 36 0.39
UniRef50_Q9SIX3 Cluster: Putative glycine-rich RNA-binding prote... 36 0.39
UniRef50_Q75KB4 Cluster: Putative RNA binding protein; n=4; Oryz... 36 0.39
UniRef50_A7QT40 Cluster: Chromosome undetermined scaffold_165, w... 36 0.39
UniRef50_Q8IM34 Cluster: RNA binding protein, putative; n=4; Pla... 36 0.39
UniRef50_Q4DDV5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.39
UniRef50_Q26658 Cluster: Stage specific activator protein; n=3; ... 36 0.39
UniRef50_Q18318 Cluster: Putative uncharacterized protein C30B5.... 36 0.39
UniRef50_A5K1G5 Cluster: RNA binding protein, putative; n=1; Pla... 36 0.39
UniRef50_A3FQ51 Cluster: Cutinase negative acting protein, putat... 36 0.39
UniRef50_A2E4P7 Cluster: Spliceosomal protein, putative; n=1; Tr... 36 0.39
UniRef50_Q75AJ0 Cluster: ADL063Wp; n=1; Eremothecium gossypii|Re... 36 0.39
UniRef50_Q6MVP3 Cluster: Related to heterogeneous nuclear ribonu... 36 0.39
UniRef50_A7EHY4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.39
UniRef50_A3M0M8 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 36 0.39
UniRef50_Q4G0J3 Cluster: La-related protein 7; n=42; Tetrapoda|R... 36 0.39
UniRef50_Q10572 Cluster: Sex determination protein fox-1; n=2; C... 36 0.39
UniRef50_UPI0001555B84 Cluster: PREDICTED: similar to PP239 prot... 36 0.51
UniRef50_UPI0000E468DC Cluster: PREDICTED: hypothetical protein;... 36 0.51
UniRef50_UPI00006CFA0A Cluster: hypothetical protein TTHERM_0042... 36 0.51
UniRef50_UPI000065D37A Cluster: ELAV-like protein 3 (Hu-antigen ... 36 0.51
UniRef50_Q4S0P4 Cluster: Chromosome 2 SCAF14781, whole genome sh... 36 0.51
UniRef50_Q9KVI6 Cluster: RNA-binding protein; n=17; Vibrionaceae... 36 0.51
UniRef50_Q7NCQ3 Cluster: RNA-binding protein; n=1; Gloeobacter v... 36 0.51
UniRef50_A6E971 Cluster: RNA binding protein; n=1; Pedobacter sp... 36 0.51
UniRef50_A3J4E6 Cluster: RNA binding protein; n=4; cellular orga... 36 0.51
UniRef50_Q9FI86 Cluster: Eukaryotic translation initiation facto... 36 0.51
UniRef50_Q8W555 Cluster: AT3g07810/F17A17_15; n=11; Magnoliophyt... 36 0.51
UniRef50_Q5ZAN1 Cluster: Putative uncharacterized protein OSJNBb... 36 0.51
UniRef50_Q259G3 Cluster: H0124B04.13 protein; n=5; Oryza sativa|... 36 0.51
UniRef50_Q10BX7 Cluster: RNA recognition motif family protein, e... 36 0.51
UniRef50_Q0DZR5 Cluster: Os02g0602600 protein; n=3; Oryza sativa... 36 0.51
UniRef50_A7PG82 Cluster: Chromosome chr6 scaffold_15, whole geno... 36 0.51
UniRef50_A5BKF9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.51
UniRef50_A2YHR7 Cluster: Putative uncharacterized protein; n=2; ... 36 0.51
UniRef50_Q5I705 Cluster: Transformer 2; n=2; Endopterygota|Rep: ... 36 0.51
UniRef50_Q5CXY1 Cluster: T8M16_190 RRM protein of possible plant... 36 0.51
UniRef50_Q1ECA2 Cluster: IP09238p; n=10; Coelomata|Rep: IP09238p... 36 0.51
UniRef50_A7AT74 Cluster: RNA-binding protein P22H7.02c, putative... 36 0.51
UniRef50_A7ART3 Cluster: Ribonucleoprotein, putative; n=1; Babes... 36 0.51
UniRef50_A4V6L6 Cluster: TLS-associated protein; n=2; root|Rep: ... 36 0.51
UniRef50_A4HMS6 Cluster: Putative uncharacterized protein; n=3; ... 36 0.51
UniRef50_A0E9I9 Cluster: Chromosome undetermined scaffold_84, wh... 36 0.51
>UniRef50_Q06477 Cluster: IFN-response element binding factor 2;
n=3; Murinae|Rep: IFN-response element binding factor 2
- Mus musculus (Mouse)
Length = 277
Score = 136 bits (328), Expect = 3e-31
Identities = 63/100 (63%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = +2
Query: 62 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ESRGFA
Sbjct: 47 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFASS 106
Query: 242 RFFELVTLKKPWTRWTDECWTAGNFAFRWRDMVA-PHRHT 358
T K PWT WT C TA ++ RWR A P R T
Sbjct: 107 GSTTSATPKTPWTPWTGRCSTAASYGCRWRATAARPTRTT 146
>UniRef50_Q8C671 Cluster: 0 day neonate head cDNA, RIKEN full-length
enriched library, clone:4833401I21 product:splicing
factor, arginine/serine-rich 2 (SC- 35), full insert
sequence; n=7; Mammalia|Rep: 0 day neonate head cDNA,
RIKEN full-length enriched library, clone:4833401I21
product:splicing factor, arginine/serine-rich 2 (SC-
35), full insert sequence - Mus musculus (Mouse)
Length = 254
Score = 116 bits (280), Expect = 2e-25
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +2
Query: 62 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 242 RFFE 253
RF +
Sbjct: 61 RFHD 64
Score = 46.0 bits (104), Expect = 4e-04
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +1
Query: 256 RDAEEALDTMDGRMLDGRELRVQMA 330
RDAE+A+D MDG +LDGRELRVQMA
Sbjct: 66 RDAEDAMDAMDGAVLDGRELRVQMA 90
>UniRef50_Q6NXQ0 Cluster: SFRS2 protein; n=4; Homo/Pan/Gorilla
group|Rep: SFRS2 protein - Homo sapiens (Human)
Length = 179
Score = 116 bits (280), Expect = 2e-25
Identities = 50/64 (78%), Positives = 58/64 (90%)
Frame = +2
Query: 62 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
MSYGRPPP ++GM SLKVDNLTYRT+P+ LRRVFE+ G VGD+YIPRDRYT+ESRGFAFV
Sbjct: 1 MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV 60
Query: 242 RFFE 253
RF +
Sbjct: 61 RFHD 64
>UniRef50_Q9BRL6 Cluster: Splicing factor, arginine/serine-rich 2B;
n=41; Eumetazoa|Rep: Splicing factor,
arginine/serine-rich 2B - Homo sapiens (Human)
Length = 282
Score = 104 bits (249), Expect = 1e-21
Identities = 44/64 (68%), Positives = 55/64 (85%)
Frame = +2
Query: 62 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
MS GRPPP +DGM++LKVDNLTYRT+P+ LRRVFE+ G VGD+YIPR+ +T+ RGFAFV
Sbjct: 1 MSCGRPPPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFV 60
Query: 242 RFFE 253
RF +
Sbjct: 61 RFHD 64
Score = 36.7 bits (81), Expect = 0.22
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1
Query: 256 RDAEEALDTMDGRMLDGRELRVQMA 330
RDA++A MDG LDGRELRVQ+A
Sbjct: 66 RDAQDAEAAMDGAELDGRELRVQVA 90
>UniRef50_Q09511 Cluster: Probable splicing factor,
arginine/serine-rich 4; n=10; Bilateria|Rep: Probable
splicing factor, arginine/serine-rich 4 - Caenorhabditis
elegans
Length = 196
Score = 95.5 bits (227), Expect = 4e-19
Identities = 38/60 (63%), Positives = 52/60 (86%)
Frame = +2
Query: 74 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
R P I+G+ SLK+DNL+Y+TTP DLRR FER G++GD++IPRD+Y+R+S+GF FVRF+E
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Score = 40.7 bits (91), Expect = 0.014
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 247 FRARDAEEALDTMDGRMLDGRELRVQMA 330
+ RDAE ALD DG+++DGRELRV +A
Sbjct: 68 YERRDAEHALDRTDGKLVDGRELRVTLA 95
>UniRef50_UPI00005C16F5 Cluster: PREDICTED: similar to Sfrs2-prov
protein; n=4; Bos taurus|Rep: PREDICTED: similar to
Sfrs2-prov protein - Bos taurus
Length = 194
Score = 77.0 bits (181), Expect = 2e-13
Identities = 33/64 (51%), Positives = 46/64 (71%)
Frame = +2
Query: 62 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
M+Y RPPP + ++SLKVDNLT + LR +FE+ G + D+YI RDR+T+ESR FAF+
Sbjct: 1 MNYSRPPPNVGDLISLKVDNLTDPISHSTLRCIFEKYGPISDVYILRDRFTQESRDFAFI 60
Query: 242 RFFE 253
F +
Sbjct: 61 CFHD 64
Score = 35.9 bits (79), Expect = 0.39
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 262 AEEALDTMDGRMLDGRELRVQMA 330
AEEA+D +DG MLDG L+VQMA
Sbjct: 68 AEEAMDALDGVMLDGHVLQVQMA 90
>UniRef50_A4RXT9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 98
Score = 71.3 bits (167), Expect = 8e-12
Identities = 29/55 (52%), Positives = 42/55 (76%)
Frame = +2
Query: 83 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
P I +VS+K+DN++Y EDLR FE+ G+VGD+YIP++R + +RGFAFVR+
Sbjct: 1 PDISNLVSVKIDNVSYELREEDLREAFEKFGDVGDVYIPKERGSYRARGFAFVRY 55
>UniRef50_Q018R2 Cluster: RSP4_CAEEL Probable splicing factor,
arginine/serine-rich 4; n=1; Ostreococcus tauri|Rep:
RSP4_CAEEL Probable splicing factor,
arginine/serine-rich 4 - Ostreococcus tauri
Length = 100
Score = 69.7 bits (163), Expect = 3e-11
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +2
Query: 74 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAF 238
R P ++ +VS+K+DNL+Y EDLR F R GE+GD+Y+P DR TR RGF F
Sbjct: 43 RERPDVNDLVSVKIDNLSYDAREEDLREAFSRYGEIGDVYVPLDRETRRPRGFCF 97
>UniRef50_A7QII5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=11; Magnoliophyta|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 284
Score = 68.9 bits (161), Expect = 4e-11
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = +2
Query: 68 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 244
+GR PP I SL V N+T+RTT +DL F++ G+V DI+IPRDR T ESRGFAFVR
Sbjct: 4 FGRSGPPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFAFVR 63
Query: 245 F 247
+
Sbjct: 64 Y 64
Score = 35.5 bits (78), Expect = 0.51
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +1
Query: 253 ARDAEEALDTMDGRMLDGRELRVQMA 330
A +A++A+D +DGR++DGRE+ VQ A
Sbjct: 67 ADEAQKAVDRLDGRIVDGREITVQFA 92
>UniRef50_Q9FMG4 Cluster: Similarity to splicing factor; n=6;
Magnoliophyta|Rep: Similarity to splicing factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 303
Score = 67.7 bits (158), Expect = 1e-10
Identities = 33/61 (54%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Frame = +2
Query: 68 YGRP-PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 244
+GR PP I SL V N+T+RTT +DL +F + G+V D++IPRDR T +SRGFAFVR
Sbjct: 4 FGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVR 63
Query: 245 F 247
+
Sbjct: 64 Y 64
Score = 32.3 bits (70), Expect = 4.7
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +1
Query: 259 DAEEALDTMDGRMLDGRELRVQMA 330
+A +A++ +DGR++DGRE+ VQ A
Sbjct: 69 EAHKAVERLDGRVVDGREITVQFA 92
>UniRef50_Q8II95 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 914
Score = 66.9 bits (156), Expect = 2e-10
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = +2
Query: 89 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
+D S+ + NL Y T+P+ +R++FE G+V D+Y+P D YTR+ RGF FV +FE
Sbjct: 2 VDSGCSILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLDHYTRKPRGFGFVEYFE 56
>UniRef50_UPI0000DBF0C6 Cluster: UPI0000DBF0C6 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF0C6 UniRef100 entry -
Rattus norvegicus
Length = 197
Score = 65.3 bits (152), Expect = 6e-10
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +2
Query: 89 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 250
+DGM LKV+NL Y T+ L+ +FE G VGD+++PR+ T E+ GFAF+ F+
Sbjct: 10 VDGMTCLKVENLAYHTSSYTLKLIFEDYGAVGDVFVPRNHLTEENYGFAFIHFY 63
>UniRef50_A7ARN5 Cluster: Ser/Arg-rich splicing factor, putative;
n=1; Babesia bovis|Rep: Ser/Arg-rich splicing factor,
putative - Babesia bovis
Length = 188
Score = 64.9 bits (151), Expect = 7e-10
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 250
SL V NL Y T+P+ LR F R GE+ D+Y+P D YTR+ RGF FV FF
Sbjct: 13 SLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYYTRKPRGFGFVEFF 61
>UniRef50_A2APT2 Cluster: Novel protein; n=3; Murinae|Rep: Novel
protein - Mus musculus (Mouse)
Length = 829
Score = 64.5 bits (150), Expect = 1e-09
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +2
Query: 89 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 250
+DGM LKV+NL + T+ L+ VFE G +GD+YIPR+ T E GFAF+ F+
Sbjct: 10 VDGMTCLKVENLAHHTSSYTLKHVFEDYGPLGDVYIPRNHLTEEHYGFAFIHFY 63
>UniRef50_A5K4S8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1057
Score = 63.3 bits (147), Expect = 2e-09
Identities = 23/55 (41%), Positives = 38/55 (69%)
Frame = +2
Query: 89 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
++ SL + NL++ T+PE +R++F+ G + D+Y+P D YTR RGF FV ++E
Sbjct: 2 VENGCSLLIKNLSFHTSPEKIRKIFQSFGRIRDVYLPLDHYTRRPRGFGFVEYYE 56
>UniRef50_Q7RMQ4 Cluster: Dentin phosphoryn; n=5; Plasmodium
(Vinckeia)|Rep: Dentin phosphoryn - Plasmodium yoelii
yoelii
Length = 793
Score = 62.1 bits (144), Expect = 5e-09
Identities = 22/55 (40%), Positives = 39/55 (70%)
Frame = +2
Query: 89 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
++ SL + NL++ T+P+ +R++FE G++ D+Y+P D YTR RGF FV +++
Sbjct: 2 VENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYD 56
>UniRef50_UPI0000D55448 Cluster: PREDICTED: similar to Splicing
factor, arginine/serine-rich 2 (Splicing factor SC35)
(SC-35) (Splicing component, 35 kDa); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Splicing factor,
arginine/serine-rich 2 (Splicing factor SC35) (SC-35)
(Splicing component, 35 kDa) - Tribolium castaneum
Length = 231
Score = 61.7 bits (143), Expect = 7e-09
Identities = 25/48 (52%), Positives = 35/48 (72%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
++K+ NL Y+ EDL+++F G + DIY+PR RYT +RGFAFVRF
Sbjct: 132 TVKITNLNYKIDEEDLKKIFSGIGPIADIYVPRLRYTHLNRGFAFVRF 179
Score = 36.7 bits (81), Expect = 0.22
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFEL 256
++V NL + TT L+ F CG+V + I R+ T SRG V++ +
Sbjct: 25 VRVANLDFGTTEATLKSFFSSCGDVHECVISRNIDTNTSRGIGHVKYLRV 74
>UniRef50_Q8WXF0 Cluster: 35 kDa SR repressor protein; n=18;
Euteleostomi|Rep: 35 kDa SR repressor protein - Homo
sapiens (Human)
Length = 261
Score = 59.3 bits (137), Expect = 4e-08
Identities = 31/60 (51%), Positives = 37/60 (61%)
Frame = +2
Query: 68 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
Y RPP SL + N+ T PEDLRR F R G + D+YIP D YTR RGFA+V+F
Sbjct: 4 YTRPPN-----TSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQF 58
>UniRef50_Q9SEU4 Cluster: Serine/arginine-rich protein; n=22;
Eukaryota|Rep: Serine/arginine-rich protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 287
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
SL V NL + EDLR+ FE+ G V DIY+PRD YT + RGF FV+F +
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMD 86
>UniRef50_Q9FYA9 Cluster: SC35-like splicing factor SCL30, 30 kD;
n=10; Magnoliophyta|Rep: SC35-like splicing factor
SCL30, 30 kD - Arabidopsis thaliana (Mouse-ear cress)
Length = 262
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
SL V N+ PE+LR FER G V D+YIPRD Y+ + RGFAFV F +
Sbjct: 48 SLLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVD 97
>UniRef50_Q2QNB0 Cluster: RNA recognition motif family protein,
expressed; n=3; Magnoliophyta|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 263
Score = 56.0 bits (129), Expect = 3e-07
Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Frame = +2
Query: 71 GRPPPRI-------DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 229
GR PPR G SL V N+ EDLR FER G V D+Y+P+D Y+ E RG
Sbjct: 20 GRSPPRRGYGGRREQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRG 79
Query: 230 FAFVRFFE 253
FAFV F +
Sbjct: 80 FAFVEFVD 87
>UniRef50_Q5CF61 Cluster: Dentin phosphoryn; n=2;
Cryptosporidium|Rep: Dentin phosphoryn - Cryptosporidium
hominis
Length = 286
Score = 55.6 bits (128), Expect = 4e-07
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
SL V NL + T+P +R FER G V D+Y+P D YTR RGF FV + +
Sbjct: 91 SLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTRRPRGFGFVEYMD 140
Score = 31.5 bits (68), Expect = 8.3
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 241 EVFRARDAEEALDTMDGRMLDGRELRVQMA 330
E RDA++A++ +DG +LDG +RV +A
Sbjct: 137 EYMDPRDAQDAVNRLDGSLLDGSTIRVVVA 166
>UniRef50_O75494 Cluster: FUS-interacting serine-arginine-rich
protein 1; n=55; Tetrapoda|Rep: FUS-interacting
serine-arginine-rich protein 1 - Homo sapiens (Human)
Length = 262
Score = 54.8 bits (126), Expect = 8e-07
Identities = 30/60 (50%), Positives = 36/60 (60%)
Frame = +2
Query: 68 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
Y RPP SL V N+ T EDLRR F R G + D+Y+P D YTR RGFA+V+F
Sbjct: 4 YLRPPN-----TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 58
>UniRef50_A5KAW4 Cluster: Ser/Arg-rich splicing factor, putative;
n=6; Plasmodium|Rep: Ser/Arg-rich splicing factor,
putative - Plasmodium vivax
Length = 328
Score = 54.4 bits (125), Expect = 1e-06
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
+SL + L Y T+P +R F++ G + D+Y+P D YT+E RGF FV F++
Sbjct: 12 MSLLIRKLKYDTSPSMVREKFKKYGAIKDVYLPIDYYTKEPRGFGFVEFYD 62
>UniRef50_Q1PDV2 Cluster: 28 kDa SC35-like splicing factor; n=9;
Magnoliophyta|Rep: 28 kDa SC35-like splicing factor -
Arabidopsis thaliana (Mouse-ear cress)
Length = 236
Score = 53.2 bits (122), Expect = 2e-06
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +2
Query: 95 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
G L + NL P DLR FER G + DIY+PR+ YT E RGF FV++
Sbjct: 45 GPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKY 95
>UniRef50_Q4U9S0 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
annulata
Length = 245
Score = 52.0 bits (119), Expect = 5e-06
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
NL + T+P+ +R FE+ G++ D+Y+P D TR RGF FV F++
Sbjct: 13 NLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYD 57
>UniRef50_UPI000155BFA0 Cluster: PREDICTED: similar to FUSIP1
protein, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to FUSIP1 protein, partial -
Ornithorhynchus anatinus
Length = 224
Score = 51.6 bits (118), Expect = 7e-06
Identities = 28/59 (47%), Positives = 34/59 (57%)
Frame = +2
Query: 71 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
G P P ID SL+ EDLRR F R G + D+Y+P D YTR RGFA+V+F
Sbjct: 82 GDPGP-IDDAGSLRCVPAFVLERSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 139
>UniRef50_Q8IIT2 Cluster: Nucleic acid binding factor, putative;
n=1; Plasmodium falciparum 3D7|Rep: Nucleic acid binding
factor, putative - Plasmodium falciparum (isolate 3D7)
Length = 580
Score = 51.6 bits (118), Expect = 7e-06
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLK 268
L V L TT E LR FE+ GE+ DIY+P D YT RG AFV F + ++K
Sbjct: 504 LFVTKLNSATTIEKLRNYFEKFGEIIDIYMPNDVYTNRPRGIAFVTFLDNESVK 557
Score = 37.9 bits (84), Expect = 0.096
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +2
Query: 122 LTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
L + + +DL + F + G++ DIY+ R+ +++GF FV F + ++ K
Sbjct: 233 LPFEASKKDLEKYFSKFGKIVDIYVSRNISNNKNKGFGFVSFEKQESMNK 282
>UniRef50_Q9P4V6 Cluster: RNA-binding protein; n=3;
Saccharomycetales|Rep: RNA-binding protein - Candida
boidinii (Yeast)
Length = 255
Score = 50.8 bits (116), Expect = 1e-05
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
S+ + NL Y TP++L++ FE CG + I IP +++T +GFA++ F
Sbjct: 125 SVYIGNLDYAATPDELQKHFESCGSINRITIPTNKFTGNPKGFAYIEF 172
>UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 294
Score = 50.8 bits (116), Expect = 1e-05
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
D ++L+V NL+ T +DLRR+F + G + +Y+ +DR T RGFAFV +
Sbjct: 211 DDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTY 262
>UniRef50_Q8DIY8 Cluster: RNA binding protein; n=3;
Cyanobacteria|Rep: RNA binding protein - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 90
Score = 50.0 bits (114), Expect = 2e-05
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
++L + NL+Y T DLR VFE+ G + I +P DR T + RGFAFV
Sbjct: 1 MTLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGKRRGFAFV 47
>UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1;
Opitutaceae bacterium TAV2|Rep: RNP-1 like RNA-binding
protein - Opitutaceae bacterium TAV2
Length = 106
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V NL++ T+ DLR F CG + D+++ DR T RGFAFV F
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTF 51
>UniRef50_Q1PES4 Cluster: RNA recognition motif-containing protein;
n=2; Arabidopsis thaliana|Rep: RNA recognition
motif-containing protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 317
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/50 (44%), Positives = 33/50 (66%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVT 262
V NLT+RTT +DLRR FE+ G+V D + + Y S+G+ F+ F + V+
Sbjct: 16 VGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFITFRDYVS 65
>UniRef50_UPI0000D997C2 Cluster: PREDICTED: similar to FUS
interacting protein (serine-arginine rich) 1; n=1;
Macaca mulatta|Rep: PREDICTED: similar to FUS
interacting protein (serine-arginine rich) 1 - Macaca
mulatta
Length = 465
Score = 49.6 bits (113), Expect = 3e-05
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 143 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
EDLRR F R G + D+Y+P D YTR RGFA+V+F
Sbjct: 392 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQF 426
>UniRef50_Q9VVE5 Cluster: CG32169-PA; n=9; Endopterygota|Rep:
CG32169-PA - Drosophila melanogaster (Fruit fly)
Length = 369
Score = 49.2 bits (112), Expect = 4e-05
Identities = 23/61 (37%), Positives = 37/61 (60%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKKPWTRWTD 292
+ L+++T+PE LR F R G++ + + +D TR SRGF FV F + ++ K T+ T
Sbjct: 33 IGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTH 92
Query: 293 E 295
E
Sbjct: 93 E 93
Score = 37.9 bits (84), Expect = 0.096
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +2
Query: 80 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
P + + V L+ TT ED++ FE+ G + D + D+ T RGF FV F
Sbjct: 111 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTF 166
>UniRef50_A2E545 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 576
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKKPW 277
L V N+ Y++T E+++ FE G V D+ +P E+RGFAFV+F +L + K +
Sbjct: 194 LYVKNIPYKSTAEEIKARFEEFGPVEDVSLPTSEVPGENRGFAFVKFADLESATKAY 250
>UniRef50_O75821 Cluster: Eukaryotic translation initiation factor 3
subunit 4; n=36; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 4 - Homo sapiens (Human)
Length = 320
Score = 48.4 bits (110), Expect = 7e-05
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +2
Query: 74 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+P R D +++V NL+ T DL+ +F G + IY+ +D+ T +S+GFAF+ F
Sbjct: 230 QPNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISF 287
>UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1;
Nitrosococcus oceani ATCC 19707|Rep: RNA-binding
protein, RNP-1 - Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848)
Length = 119
Score = 48.0 bits (109), Expect = 9e-05
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +2
Query: 98 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
+V++ V NL+Y+ T EDLR FE GEV + D+++ S+GF FV
Sbjct: 17 IVNIYVGNLSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFV 64
>UniRef50_A2YR27 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 221
Score = 48.0 bits (109), Expect = 9e-05
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +2
Query: 77 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
PPP+ D +L + L+ RTT + L+ F + GEV + DR T S+GF F+R+
Sbjct: 28 PPPKADPSPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRY 84
>UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
LOC561459 protein - Danio rerio
Length = 329
Score = 47.6 bits (108), Expect = 1e-04
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
D + L V L + TT E LR F + GEV D I +D+ T +SRGF FV+F
Sbjct: 20 DEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKF 71
>UniRef50_UPI0000DB7622 Cluster: PREDICTED: similar to CG3335-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG3335-PA
- Apis mellifera
Length = 816
Score = 47.6 bits (108), Expect = 1e-04
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+ NL+Y TT +D+R++FE+ G + ++ +P DR TR+ +GF + F
Sbjct: 306 IRNLSYTTTEDDIRKLFEKYGPLTEVNLPIDRITRKLKGFGTITF 350
>UniRef50_Q8MYR4 Cluster: SD14970p; n=2; Drosophila
melanogaster|Rep: SD14970p - Drosophila melanogaster
(Fruit fly)
Length = 918
Score = 47.6 bits (108), Expect = 1e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
NL Y TT EDLR++FE+ G V ++ +P D+ TR+ +GF V +
Sbjct: 370 NLAYTTTEEDLRKLFEQFGPVVEVNLPLDKLTRKIKGFGTVTY 412
>UniRef50_Q4UI71 Cluster: RNA-binding (SR) protein, putative; n=2;
Theileria|Rep: RNA-binding (SR) protein, putative -
Theileria annulata
Length = 303
Score = 47.6 bits (108), Expect = 1e-04
Identities = 26/50 (52%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +2
Query: 104 SLKV--DNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
SLK+ LT TTPEDL+ F + GEV I RD+ T SRGF FV F
Sbjct: 27 SLKIFAGGLTRSTTPEDLKEYFSKYGEVTHTEIVRDKNTGRSRGFGFVTF 76
>UniRef50_Q4PBU3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 588
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
+ L + TT + LRR F + GEVG+ I RD T SRGFAF+ F +
Sbjct: 173 IGGLNWDTTEDSLRRYFSQFGEVGNCAIMRDNMTGRSRGFAFLNFVD 219
Score = 31.9 bits (69), Expect = 6.3
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V L TP R FE+ G + D DR T + RGF F+ +
Sbjct: 280 LFVGGLPPSVTPATFRTFFEQFGTLSDCTCMMDRETGKPRGFGFLTY 326
>UniRef50_Q2GTP8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 250
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
S+ V N+ Y T+PE+L+ F+ CG + + I D++T + +G+A+V F E
Sbjct: 128 SIFVGNVDYSTSPEELQAHFQSCGSINRVTILLDKFTGQPKGYAYVEFSE 177
>UniRef50_A1DGG0 Cluster: Small subunit of nuclear cap-binding
protein complex; n=8; Pezizomycotina|Rep: Small subunit
of nuclear cap-binding protein complex - Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 196
Score = 47.6 bits (108), Expect = 1e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 77 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 250
P ++ +L V NL++ TT E + +F +CGE+ + + DRY + GF FV ++
Sbjct: 59 PVDKLKDATTLYVGNLSFYTTEEQIHELFSKCGEIKRLVMGLDRYNKTPCGFCFVEYY 116
>UniRef50_P78795 Cluster: Probable eukaryotic translation initiation
factor 3 RNA-binding subunit; n=1; Schizosaccharomyces
pombe|Rep: Probable eukaryotic translation initiation
factor 3 RNA-binding subunit - Schizosaccharomyces pombe
(Fission yeast)
Length = 282
Score = 47.6 bits (108), Expect = 1e-04
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
D +L+V NL+ T E+LR +F R G + +Y+ +D+ T ++GFAFV +++
Sbjct: 199 DDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYD 252
>UniRef50_Q9FIU6 Cluster: Similarity to RNA-binding protein; n=4;
Magnoliophyta|Rep: Similarity to RNA-binding protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 156
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +2
Query: 83 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFEL 256
P+ + +L V L+ RTT E LR F + GEV D + DR + S+GF FVR+ L
Sbjct: 50 PQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATL 107
>UniRef50_A4RUB8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 319
Score = 47.2 bits (107), Expect = 2e-04
Identities = 23/48 (47%), Positives = 30/48 (62%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+L V N++ R LRR+FE CGEV + RD T +SRGF FV+F
Sbjct: 21 NLYVKNISERVDELTLRRLFEACGEVQSCCVIRDVSTNKSRGFGFVKF 68
>UniRef50_Q9P383 Cluster: Nuclear cap-binding complex small subunit;
n=1; Schizosaccharomyces pombe|Rep: Nuclear cap-binding
complex small subunit - Schizosaccharomyces pombe
(Fission yeast)
Length = 182
Score = 47.2 bits (107), Expect = 2e-04
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
V NL++ TT E + +F +CGE+ I + DR+T+ GF FV +FE
Sbjct: 36 VGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRFTKTPCGFCFVEYFE 82
>UniRef50_Q96EP5 Cluster: DAZ-associated protein 1; n=39;
Euteleostomi|Rep: DAZ-associated protein 1 - Homo
sapiens (Human)
Length = 407
Score = 47.2 bits (107), Expect = 2e-04
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
D + L V L + TT E LR F + GEV D I +D+ T +SRGF FV+F
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 58
>UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 476
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V L + TT E LR F + GEV D I +D+ T +SRGF FV+F
Sbjct: 2 LFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKF 48
>UniRef50_A4RWB3 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 92
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
VS+ V N+++ +D+R F+ G V D+Y+P+DR T RG AFV++
Sbjct: 1 VSVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVKY 49
>UniRef50_Q54PB2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 895
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V NL+Y T EDL +VF + G++ +I+IP D +++S+G AF+ +
Sbjct: 365 VRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILY 409
Score = 34.3 bits (75), Expect = 1.2
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 65 SYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 244
S G P + + +K NL + +T +++R++F GE+ + IP+ + RGF FV
Sbjct: 785 SNGGQPNKPSSKIIIK--NLPFESTIKEIRKLFTAYGEIQSVRIPK-KPNGGHRGFGFVE 841
Query: 245 F 247
F
Sbjct: 842 F 842
>UniRef50_Q4MZK1 Cluster: Nucleic acid binding factor, putative;
n=2; Theileria|Rep: Nucleic acid binding factor,
putative - Theileria parva
Length = 421
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V + + T+ LR F + GEV D+YIP+D +T++ +GF F+ F
Sbjct: 340 LFVGRIAFETSVHSLRTYFSQFGEVIDVYIPKDPHTQKGKGFGFITF 386
Score = 35.9 bits (79), Expect = 0.39
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPR-DRYTRESRGFAFVRFFELVTLKK 271
+ + + T +DL F++ G V D Y PR + Y+ ++GF F+ F +++K
Sbjct: 122 ITRIAFEATKDDLEDYFKKFGTVYDAYCPRQNNYSGLNKGFGFISFENEDSIRK 175
>UniRef50_A5K494 Cluster: Nucleic acid binding factor, putative;
n=2; Plasmodium|Rep: Nucleic acid binding factor,
putative - Plasmodium vivax
Length = 753
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 30/55 (54%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
L V L TT E LR FE GE+ DIY+P D T RG AFV F + +KK
Sbjct: 665 LFVTKLNSVTTIETLRNYFEAFGEIIDIYMPNDVCTNRPRGIAFVTFLDNDCVKK 719
Score = 37.5 bits (83), Expect = 0.13
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2
Query: 89 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLK 268
+ G + V L + +DL + F + G++ DIY+ ++ +++GF FV F + ++
Sbjct: 359 LKGYPRIFVTRLPFEAGKKDLEKYFSKYGKIVDIYVSKNLSNNKNKGFGFVSFEKQSSMD 418
Query: 269 K 271
K
Sbjct: 419 K 419
>UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein,
putative; n=2; Aspergillus|Rep: Glycine-rich RNA-binding
protein, putative - Aspergillus clavatus
Length = 133
Score = 46.8 bits (106), Expect = 2e-04
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +2
Query: 98 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
M L + L + TT + LR+ FE+ G+V + + +DR T SRGF FVRF
Sbjct: 1 MSKLFIGGLAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRF 50
>UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10;
Bacteria|Rep: Putative RNA-binding protein rbpF -
Anabaena sp. (strain PCC 7120)
Length = 105
Score = 46.8 bits (106), Expect = 2e-04
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
+S+ V NL+Y T ED+ VF G V + +P DR T RGFAFV
Sbjct: 1 MSIYVGNLSYEVTQEDISNVFAEYGSVKRVVLPTDRETGRLRGFAFV 47
>UniRef50_UPI0000498562 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 135
Score = 46.4 bits (105), Expect = 3e-04
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
S+ V N+ Y TT E+L +FERCG V + IP +++T+ + G+A + F
Sbjct: 40 SVHVSNVEYTTTKEELEDLFERCGVVLKVNIPINQFTQTTMGYANIEF 87
>UniRef50_Q4S8N9 Cluster: Chromosome 7 SCAF14703, whole genome
shotgun sequence; n=4; Clupeocephala|Rep: Chromosome 7
SCAF14703, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 157
Score = 46.4 bits (105), Expect = 3e-04
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
+ L+++T+P+ LR F + GE+ + + RD T+ SRGF FV F + ++ K
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDK 77
>UniRef50_A7AT82 Cluster: RNA recognition motif containing protein;
n=1; Babesia bovis|Rep: RNA recognition motif containing
protein - Babesia bovis
Length = 253
Score = 46.4 bits (105), Expect = 3e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
S+ + NL Y T ++R FE G++ D+Y+P+D + RGF FV F E
Sbjct: 10 SVLIRNLKYSTRASEVREAFECFGKIRDVYLPQDYSSGMPRGFGFVEFVE 59
>UniRef50_A5JZY0 Cluster: RNA binding protein, putative; n=2;
Eukaryota|Rep: RNA binding protein, putative - Plasmodium
vivax
Length = 1127
Score = 46.4 bits (105), Expect = 3e-04
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V NL ++ T E+LR++F G + + IP++ Y R SRG+AFV F
Sbjct: 988 LLVKNLAFQVTKEELRKLFSAFGNIKSVRIPKNAYNR-SRGYAFVEF 1033
>UniRef50_Q2UQ21 Cluster: Predicted protein; n=3;
Pezizomycotina|Rep: Predicted protein - Aspergillus
oryzae
Length = 127
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +2
Query: 98 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
M L + L + TT E LR FE+ G V + + +DR T SRGF FVRF
Sbjct: 1 MSKLFIGGLAWHTTDESLRSGFEKYGAVEEAIVVKDRDTGRSRGFGFVRF 50
>UniRef50_P62995 Cluster: Splicing factor, arginine/serine-rich 10;
n=30; Bilateria|Rep: Splicing factor,
arginine/serine-rich 10 - Homo sapiens (Human)
Length = 288
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V L+ TT DLR VF + G + D+ I D+ +R SRGFAFV F
Sbjct: 120 LGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYF 166
>UniRef50_Q9Y4C8 Cluster: Probable RNA-binding protein 19; n=30;
Deuterostomia|Rep: Probable RNA-binding protein 19 -
Homo sapiens (Human)
Length = 960
Score = 46.4 bits (105), Expect = 3e-04
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V NL Y +T EDL ++F + G + +++ P D T++ +GFAF+ F
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITF 450
>UniRef50_UPI00015560CE Cluster: PREDICTED: similar to heterogeneous
nuclear ribonucleoprotein A1; n=4; Mammalia|Rep:
PREDICTED: similar to heterogeneous nuclear
ribonucleoprotein A1 - Ornithorhynchus anatinus
Length = 280
Score = 46.0 bits (104), Expect = 4e-04
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 62 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
MS P + + L + L++ TT E LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
Query: 242 RF 247
+
Sbjct: 61 TY 62
>UniRef50_Q5CX28 Cluster: RRM domain containing protein; T22E16.120
Sc35-like splicing factor; n=3; Cryptosporidium|Rep: RRM
domain containing protein; T22E16.120 Sc35-like splicing
factor - Cryptosporidium parvum Iowa II
Length = 344
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
SL + +L + T +RR FER G + D+Y+P D +R RGF FV + E
Sbjct: 28 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVE 77
>UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 308
Score = 46.0 bits (104), Expect = 4e-04
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
D + +L+V NL+ +DLR +F R G V +Y+ RDR T +G+AFV F
Sbjct: 222 DDLPTLRVTNLSEDADDDDLRELFMRFGRVVRVYVGRDRETGICKGYAFVSF 273
>UniRef50_P09651 Cluster: Heterogeneous nuclear ribonucleoprotein
A1; n=390; Euteleostomi|Rep: Heterogeneous nuclear
ribonucleoprotein A1 - Homo sapiens (Human)
Length = 372
Score = 46.0 bits (104), Expect = 4e-04
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 62 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
MS P + + L + L++ TT E LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
Query: 242 RF 247
+
Sbjct: 61 TY 62
Score = 32.3 bits (70), Expect = 4.7
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 134 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
T LR FE+ G++ I I DR + + RGFAFV F
Sbjct: 116 TEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 153
>UniRef50_O14327 Cluster: Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)- binding protein
II); n=22; Eukaryota|Rep: Polyadenylate-binding protein
2 (Poly(A)-binding protein 2) (Poly(A)- binding protein
II) - Schizosaccharomyces pombe (Fission yeast)
Length = 166
Score = 46.0 bits (104), Expect = 4e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
S+ V N+ Y TPE+L+ F CG V + I D++T +GFA++ F E
Sbjct: 56 SVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSE 105
>UniRef50_Q8CD63 Cluster: 13 days embryo male testis cDNA, RIKEN
full-length enriched library, clone:6030413L18
product:Musashi homolog 2 (Drosophila), full insert
sequence; n=3; Deuterostomia|Rep: 13 days embryo male
testis cDNA, RIKEN full-length enriched library,
clone:6030413L18 product:Musashi homolog 2 (Drosophila),
full insert sequence - Mus musculus (Mouse)
Length = 192
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
+ L+++T+P+ LR F + GE+ + + RD T+ SRGF FV F + ++ K
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDPASVDK 77
>UniRef50_Q32LZ4 Cluster: Msi2h protein; n=4; Eutheria|Rep: Msi2h
protein - Mus musculus (Mouse)
Length = 193
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
+ L+++T+P+ LR F + GE+ + + RD T+ SRGF FV F + ++ K
Sbjct: 25 IGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 77
>UniRef50_Q5TTQ2 Cluster: ENSANGP00000026814; n=3;
Endopterygota|Rep: ENSANGP00000026814 - Anopheles
gambiae str. PEST
Length = 358
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L + L YRTT + L+ FE+ G+V D+ + +D T+ SRGF F+ +
Sbjct: 29 LFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITY 75
>UniRef50_Q5DF32 Cluster: SJCHGC06618 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06618 protein - Schistosoma
japonicum (Blood fluke)
Length = 281
Score = 45.6 bits (103), Expect = 5e-04
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLK 268
+++V NL TT +DL+ +F G V IY +D+ T+++RGFAF+ F L K
Sbjct: 201 TVRVTNLAPDTTVDDLKAMFSAFGHVMRIYPAKDKLTQQNRGFAFISFKTLEEAK 255
>UniRef50_Q23QD3 Cluster: Polyadenylate-binding protein 2; n=1;
Tetrahymena thermophila SB210|Rep: Polyadenylate-binding
protein 2 - Tetrahymena thermophila SB210
Length = 180
Score = 45.6 bits (103), Expect = 5e-04
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
S+ V N+ Y TT E+L +F+ CGE+ I IP+ R + +GFA+++F +
Sbjct: 60 SIFVQNVEYNTTKEELMDIFKDCGEIEKITIPQTR-QGQGKGFAYIQFVD 108
>UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 147
Score = 45.6 bits (103), Expect = 5e-04
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 98 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
M L + L + TT E LR+ F + G + + + +DR T SRGF FVRF
Sbjct: 1 MSKLFIGGLAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRF 50
>UniRef50_P51991 Cluster: Heterogeneous nuclear ribonucleoprotein
A3; n=98; Coelomata|Rep: Heterogeneous nuclear
ribonucleoprotein A3 - Homo sapiens (Human)
Length = 378
Score = 45.6 bits (103), Expect = 5e-04
Identities = 21/59 (35%), Positives = 32/59 (54%)
Frame = +2
Query: 71 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
G P + + L + L++ TT + LR FE+ G + D + RD T+ SRGF FV +
Sbjct: 25 GHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTY 83
Score = 35.5 bits (78), Expect = 0.51
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 134 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
T +LR FE+ G++ I + DR + + RGFAFV F + T+ K
Sbjct: 137 TEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDK 182
>UniRef50_Q7ZWE3 Cluster: La-related protein 7; n=3;
Clupeocephala|Rep: La-related protein 7 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 555
Score = 45.6 bits (103), Expect = 5e-04
Identities = 27/63 (42%), Positives = 34/63 (53%)
Frame = +2
Query: 59 KMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAF 238
K G P +D ++ V+ L T L RVF +CG V I IPR + TR S+GFAF
Sbjct: 120 KEPLGETPKDVDSR-TVYVELLPKTVTHIWLERVFSKCGHVVYISIPRYKSTRHSKGFAF 178
Query: 239 VRF 247
V F
Sbjct: 179 VEF 181
>UniRef50_A7PHW6 Cluster: Chromosome chr13 scaffold_17, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr13 scaffold_17, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 45.2 bits (102), Expect = 6e-04
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V NL Y T DL +F G+V + I +DR+TR SRG AFV F
Sbjct: 118 VSNLDYTLTNSDLFTIFSTFGKVAKVTILKDRHTRHSRGVAFVLF 162
>UniRef50_Q6X9Z2 Cluster: HnRNP core protein A1; n=2;
Laurasiatheria|Rep: HnRNP core protein A1 - Equus
caballus (Horse)
Length = 61
Score = 45.2 bits (102), Expect = 6e-04
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2
Query: 62 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
MS P + + L + L++ TT E LR FE+ G + D + RD T+ SRGF FV
Sbjct: 1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV 60
>UniRef50_Q21911 Cluster: Putative uncharacterized protein msi-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein msi-1 - Caenorhabditis elegans
Length = 320
Score = 45.2 bits (102), Expect = 6e-04
Identities = 20/53 (37%), Positives = 33/53 (62%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
+ L+++TT E+LR F R GEV + + RD T+ +RGF F+ F + ++ K
Sbjct: 49 IGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDK 101
Score = 37.5 bits (83), Expect = 0.13
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+ L+ +T ED+++ FE G+V D + D+ T+ RGF FV F
Sbjct: 138 IGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
>UniRef50_Q08208 Cluster: Nucleolar protein 12; n=5;
Saccharomycetales|Rep: Nucleolar protein 12 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 459
Score = 45.2 bits (102), Expect = 6e-04
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = +2
Query: 65 SYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 244
S P P D S+ V NL + E L + FE CG++ + I RD T +GFA+V+
Sbjct: 268 SVAHPAPH-DKKRSIFVGNLDFEEIEESLWKHFEPCGDIEYVRIIRDSKTNMGKGFAYVQ 326
Query: 245 FFELVTLKK 271
F +L ++ K
Sbjct: 327 FKDLQSVNK 335
>UniRef50_O43347 Cluster: RNA-binding protein Musashi homolog 1;
n=65; Euteleostomi|Rep: RNA-binding protein Musashi
homolog 1 - Homo sapiens (Human)
Length = 362
Score = 45.2 bits (102), Expect = 6e-04
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
+ L+++TT E LR F + GEV + + RD T+ SRGF FV F + + K
Sbjct: 24 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Score = 41.5 bits (93), Expect = 0.008
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2
Query: 80 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
P + + V L+ TT ED+++ FE+ G+V D + D+ T RGF FV F
Sbjct: 102 PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTF 157
>UniRef50_UPI0000546443 Cluster: PREDICTED: hypothetical protein;
n=3; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 163
Score = 44.8 bits (101), Expect = 8e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
S+ V N+ Y T ++L F CG V + IP +R+T +GFA++ F
Sbjct: 38 SIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYIEF 85
>UniRef50_O45713 Cluster: Putative uncharacterized protein; n=5;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 85
Score = 44.8 bits (101), Expect = 8e-04
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
S+ V N ++TT +DL F + G V ++ I DR T RGFAFV F E
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTE 54
>UniRef50_Q94AC3 Cluster: AT4g36960/C7A10_400; n=11;
Magnoliophyta|Rep: AT4g36960/C7A10_400 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 379
Score = 44.4 bits (100), Expect = 0.001
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 YGRPPPRIDGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 244
YGR P G+ + + V L + +DLR F R G + D YIP+D RGF FV
Sbjct: 228 YGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVT 287
Query: 245 FFE 253
F E
Sbjct: 288 FAE 290
Score = 39.9 bits (89), Expect = 0.024
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 146 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
D R FER GE+ D+Y+P+D +++ RG F+ F
Sbjct: 106 DFRSHFERYGEITDLYMPKDYNSKQHRGIGFITF 139
>UniRef50_Q6ID29 Cluster: At4g13860; n=9; cellular organisms|Rep:
At4g13860 - Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 44.4 bits (100), Expect = 0.001
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V NL+ TT + LR F G V D + RDRYT SRGF FV +
Sbjct: 7 VGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTY 51
>UniRef50_O23189 Cluster: RNA-binding like protein; n=1; Arabidopsis
thaliana|Rep: RNA-binding like protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 306
Score = 44.4 bits (100), Expect = 0.001
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 YGRPPPRIDGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 244
YGR P G+ + + V L + +DLR F R G + D YIP+D RGF FV
Sbjct: 172 YGRGEPTTRGIGNKIFVGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVT 231
Query: 245 FFE 253
F E
Sbjct: 232 FAE 234
>UniRef50_A7QJZ9 Cluster: Chromosome undetermined scaffold_109,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_109, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 170
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V L++RTT E LR FE G++ ++ + D+ RGFAF+R+
Sbjct: 81 LYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRY 127
>UniRef50_Q9VZE4 Cluster: CG1316-PA; n=5; Diptera|Rep: CG1316-PA -
Drosophila melanogaster (Fruit fly)
Length = 470
Score = 44.4 bits (100), Expect = 0.001
Identities = 23/75 (30%), Positives = 40/75 (53%)
Frame = +2
Query: 137 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKKPWTRWTDECWTAGNF 316
T ED R F GE+ DI++ +D++T+E++G A+V+F + K + T G
Sbjct: 39 TEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEEMNGK--TIGKM 96
Query: 317 AFRWRDMVAPHRHTG 361
+ +VA +R+ G
Sbjct: 97 DRTLKVLVAANRNQG 111
Score = 32.7 bits (71), Expect = 3.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 137 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
T ED+R F + G+V + I +++ +GF +VRF
Sbjct: 134 TEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYVRF 170
>UniRef50_Q6ZR81 Cluster: CDNA FLJ46566 fis, clone THYMU3040829,
moderately similar to Cold- inducible RNA-binding
protein; n=1; Homo sapiens|Rep: CDNA FLJ46566 fis, clone
THYMU3040829, moderately similar to Cold- inducible
RNA-binding protein - Homo sapiens (Human)
Length = 135
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V L++ T + L +VF + G++ ++ + +DR T+ SRGF FV F
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTF 54
>UniRef50_Q5KLP3 Cluster: Poly(A) binding protein, putative; n=1;
Filobasidiella neoformans|Rep: Poly(A) binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 210
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +2
Query: 98 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
M S+ + N+ Y TPE+++ F+ CG + + I D++T +G+A+V F E
Sbjct: 92 MRSVFIGNVDYGATPEEIQAHFQACGTINRVTILCDKFTGHPKGYAYVEFAE 143
>UniRef50_Q14011 Cluster: Cold-inducible RNA-binding protein; n=62;
Eukaryota|Rep: Cold-inducible RNA-binding protein - Homo
sapiens (Human)
Length = 172
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V L++ T + L +VF + G++ ++ + +DR T+ SRGF FV F
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTF 54
>UniRef50_Q02AB7 Cluster: RNP-1 like RNA-binding protein; n=2;
cellular organisms|Rep: RNP-1 like RNA-binding protein -
Solibacter usitatus (strain Ellin6076)
Length = 132
Score = 44.0 bits (99), Expect = 0.001
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +2
Query: 98 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
M ++ V NL + + E +R +FER G+V I DR T SRGFAFV
Sbjct: 1 MKNIFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGRSRGFAFV 48
>UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:
RNA-binding protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 95
Score = 44.0 bits (99), Expect = 0.001
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +2
Query: 89 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
+DGM + V NL+YR T ++L VF + G+V + I DR T +S+GF F+
Sbjct: 1 MDGM-KIYVGNLSYRMTADELTTVFSQFGQVDKVDIIIDRDTGQSKGFGFI 50
>UniRef50_Q8MS04 Cluster: RH49436p; n=9; Endopterygota|Rep: RH49436p
- Drosophila melanogaster (Fruit fly)
Length = 634
Score = 44.0 bits (99), Expect = 0.001
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
L V L+++T+ + L+ F G V D+ I +D T+ SRGF F+ F E T++K
Sbjct: 205 LFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEK 259
>UniRef50_Q7R874 Cluster: RNA recognition motif, putative; n=6;
Plasmodium (Vinckeia)|Rep: RNA recognition motif,
putative - Plasmodium yoelii yoelii
Length = 767
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V NL ++ T E+L+++F G + ++ IP++ Y R SRG+ FV F
Sbjct: 630 LLVKNLAFQVTKEELKKLFSAFGNIKNVRIPKNAYNR-SRGYGFVEF 675
>UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Rep:
PRM10 protein - Dugesia japonica (Planarian)
Length = 325
Score = 44.0 bits (99), Expect = 0.001
Identities = 25/60 (41%), Positives = 31/60 (51%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
D L V L++ TT EDL+ FE G+V I D+ T SRGF FV +LKK
Sbjct: 69 DDSRKLFVGGLSWETTEEDLKNYFETWGKVAHCVIKLDKMTGNSRGFGFVTMDTEDSLKK 128
>UniRef50_P48810 Cluster: Heterogeneous nuclear ribonucleoprotein
87F; n=16; Coelomata|Rep: Heterogeneous nuclear
ribonucleoprotein 87F - Drosophila melanogaster (Fruit
fly)
Length = 385
Score = 44.0 bits (99), Expect = 0.001
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L + L YRTT + L+ FE+ G + D+ + +D T+ SRGF F+ +
Sbjct: 26 LFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 72
Score = 31.5 bits (68), Expect = 8.3
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 143 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
E LR F+ G++ + I D+ T + RGFAF+ F
Sbjct: 129 ECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEF 163
>UniRef50_UPI00006CFFFC Cluster: RNA binding protein; n=1;
Tetrahymena thermophila SB210|Rep: RNA binding protein -
Tetrahymena thermophila SB210
Length = 451
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +2
Query: 89 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
+D ++ V NL ++ + E LR FE CG++ ++ + RD T E +GF +V F E
Sbjct: 179 LDYTRTIFVGNLHFKISEEQLRHHFESCGDILNVRVIRDPKTHEGKGFGYVFFKE 233
>UniRef50_P73557 Cluster: RNA-binding protein; n=2;
Chroococcales|Rep: RNA-binding protein - Synechocystis
sp. (strain PCC 6803)
Length = 83
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
+S+ V NL+Y+ T +D+ VF G V + +P DR T RGF FV
Sbjct: 1 MSIYVGNLSYQATEDDVLTVFSEYGTVKRVQLPTDRETGRMRGFGFV 47
>UniRef50_Q8I5N6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1119
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V NL ++ E+LR++F G V + IP++ Y R SRG+AF+ F
Sbjct: 985 LVVKNLAFQVNKEELRKLFSAFGNVKSVRIPKNVYNR-SRGYAFIEF 1030
>UniRef50_Q4UCX7 Cluster: RNA poly(A)-binding protein, putative;
n=3; Piroplasmida|Rep: RNA poly(A)-binding protein,
putative - Theileria annulata
Length = 176
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
S+ V N+ Y T P++L+ F+ G++ I I D+YT +G+A+V F
Sbjct: 43 SIYVGNVDYSTKPQELQEFFKSSGQINRITIMVDKYTGHPKGYAYVEF 90
>UniRef50_Q24847 Cluster: Surface antigen protein; n=3; Entamoeba
histolytica|Rep: Surface antigen protein - Entamoeba
histolytica
Length = 294
Score = 43.6 bits (98), Expect = 0.002
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+ NL + T ++ R+ F+R G + +I++P D+ T++S+GF V F
Sbjct: 190 ITNLPFNCTEDEFRKEFDRFGNIAEIHLPIDKITKKSKGFGKVLF 234
>UniRef50_O44530 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 177
Score = 43.6 bits (98), Expect = 0.002
Identities = 18/55 (32%), Positives = 35/55 (63%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLK 268
S+ V N+ +++T ++ F CG+V + IP+D++T + FAFV F +L +++
Sbjct: 47 SVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQ 101
>UniRef50_A7SCX6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 305
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
D + L V L+Y TT E L+ F + GE+ + I D T RGFAFV+F
Sbjct: 26 DDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQF 77
>UniRef50_UPI00015B5DA3 Cluster: PREDICTED: similar to CG3335-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG3335-PA - Nasonia vitripennis
Length = 909
Score = 43.2 bits (97), Expect = 0.003
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
NL+Y T +D+R++FE G + ++ +P D TR+ +GF V F
Sbjct: 365 NLSYTATEDDIRKLFETYGPLSEVNLPIDMVTRKPKGFGTVTF 407
Score = 35.9 bits (79), Expect = 0.39
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYI-----PRDRYTRESRGFAFVRF 247
+L V NL +RTT E LR+ F +CG++ + P++ + S G+ FVR+
Sbjct: 677 TLFVKNLDFRTTEEQLRKHFSKCGKLHYASVSTKKDPKNPGNKLSMGYGFVRY 729
>UniRef50_UPI00004996C0 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 98 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
M L + +L Y T E L+ FE+ G V D + DR ++ S+GF FV F
Sbjct: 1 MTRLYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTF 50
>UniRef50_Q66IT0 Cluster: MGC84815 protein; n=1; Xenopus laevis|Rep:
MGC84815 protein - Xenopus laevis (African clawed frog)
Length = 291
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2
Query: 83 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVT 262
P+ D L V L +T + LR + + GE+ D+ + +D + +SRGF FV F E +
Sbjct: 7 PKADQDKKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASS 66
Query: 263 LKK 271
+ K
Sbjct: 67 VDK 69
Score = 33.9 bits (74), Expect = 1.6
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
V L T EDL F + G V D I + T SRGFAFV F + ++ K
Sbjct: 107 VGGLKKDVTNEDLAEYFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDK 159
>UniRef50_O35698 Cluster: RNA-binding protein; n=7; Mus
musculus|Rep: RNA-binding protein - Mus musculus (Mouse)
Length = 380
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLK 268
+ L +T + L+ +F R G V + + RDR T++SRGFAF+ F L K
Sbjct: 12 IGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAK 63
>UniRef50_Q9SJT4 Cluster: Expressed protein; n=1; Arabidopsis
thaliana|Rep: Expressed protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1003
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L + NL ++ P D++ VF G V D++IP++ T +GFAFV+F
Sbjct: 333 LIIRNLPFQAKPSDIKVVFSAVGFVWDVFIPKNFETGLPKGFAFVKF 379
Score = 32.7 bits (71), Expect = 3.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V L Y T L F G V ++ ++ + E RGFAFV+F
Sbjct: 24 VSGLPYSITNAQLEEAFSEVGPVRRCFLVTNKGSDEHRGFAFVKF 68
Score = 31.5 bits (68), Expect = 8.3
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+L + NL + T E++++ F GEV + + + T+ G AFV+F
Sbjct: 562 TLFIRNLPFDVTKEEVKQRFTVFGEVESLSLVLHKVTKRPEGTAFVKF 609
>UniRef50_Q9CAE4 Cluster: Putative uncharacterized protein
F13M14.33; n=5; Magnoliophyta|Rep: Putative
uncharacterized protein F13M14.33 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 261
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+L V NL + T D+ +F G+V + + +DR+TR+SRG AFV +
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLY 105
>UniRef50_Q0ITI7 Cluster: Os11g0250000 protein; n=5; Oryza
sativa|Rep: Os11g0250000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 500
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+ L TT EDLR + + GE+ ++ + +D+ T+E++GFAFV F
Sbjct: 108 IGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFVNF 152
Score = 31.5 bits (68), Expect = 8.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
++ V NL + E ++ +FE+ GEV + +P + R F FV F E
Sbjct: 316 TIYVKNLPENASKEKIKEIFEKHGEVTKVVLPPAK-DGHKRDFGFVHFAE 364
>UniRef50_Q6PNM9 Cluster: AUF1 similar protein; n=3; Paracentrotus
lividus|Rep: AUF1 similar protein - Paracentrotus
lividus (Common sea urchin)
Length = 361
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V L + TTPE L++ F G V D I +D+ T++ RGF F+ F
Sbjct: 52 LFVGGLAWNTTPETLQQYFSAYGTVQDCEIKKDQVTKKPRGFGFILF 98
>UniRef50_A7SCR4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 607
Score = 43.2 bits (97), Expect = 0.003
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
SL V NL+Y TT + L FE C I+ DR + ESRGF FV + ++ T KK
Sbjct: 478 SLIVRNLSYDTTTDSLGAAFEGCSNAKVIF---DRESGESRGFGFVDYDDVETAKK 530
>UniRef50_Q8IY53 Cluster: Putative uncharacterized protein; n=1;
Homo sapiens|Rep: Putative uncharacterized protein -
Homo sapiens (Human)
Length = 248
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 137 TPED-LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
TPE LR F G++ DI++ RD++T+ES+G AFV+F
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKF 73
>UniRef50_Q8TBF4 Cluster: Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; n=32; Eumetazoa|Rep: Zinc
finger CCHC-type and RNA-binding motif-containing
protein 1 - Homo sapiens (Human)
Length = 217
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
V NL + T DL R+F + G+V + I +D+ TR+S+G AF+ F +
Sbjct: 14 VSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLD 60
>UniRef50_Q13148 Cluster: TAR DNA-binding protein 43; n=36;
Coelomata|Rep: TAR DNA-binding protein 43 - Homo sapiens
(Human)
Length = 414
Score = 43.2 bits (97), Expect = 0.003
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
L V L ++TT +DL+ F GEV + + +D T S+GF FVRF E T K
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
>UniRef50_Q22037 Cluster: Heterogeneous nuclear ribonucleoprotein
A1; n=5; Caenorhabditis|Rep: Heterogeneous nuclear
ribonucleoprotein A1 - Caenorhabditis elegans
Length = 346
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V LT TT + +R + + GE+ DI + RD T+ SRGF FV F
Sbjct: 27 VGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
>UniRef50_Q8IUH3 Cluster: RNA-binding protein 45; n=27;
Euteleostomi|Rep: RNA-binding protein 45 - Homo sapiens
(Human)
Length = 476
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 137 TPED-LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
TPE LR F G++ DI++ RD++T+ES+G AFV+F
Sbjct: 36 TPESVLRERFSPFGDIQDIWVVRDKHTKESKGIAFVKF 73
Score = 31.5 bits (68), Expect = 8.3
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 137 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
T EDLR F+ G++ I +++ T ES+G +VR+ +
Sbjct: 132 TEEDLREKFKVYGDIEYCSIIKNKVTGESKGLGYVRYLK 170
>UniRef50_UPI0000E47947 Cluster: PREDICTED: similar to GA10247-PA;
n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to GA10247-PA - Strongylocentrotus purpuratus
Length = 519
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V L V L Y TT E+++ F + GE+ ++ RD T++S+GF F+R+
Sbjct: 119 VDLIVLGLDYNTTDEEMKEYFGKYGELLMAHVKRDPVTQKSKGFGFIRY 167
Score = 37.1 bits (82), Expect = 0.17
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
L + LT TT EDL +F + GEV D++IP + RGFAFV
Sbjct: 207 LFIGRLTSDTTKEDLFDIFSKYGEVVDVFIP-----KPFRGFAFV 246
>UniRef50_UPI000023E598 Cluster: hypothetical protein FG10156.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10156.1 - Gibberella zeae PH-1
Length = 420
Score = 42.7 bits (96), Expect = 0.003
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
V N+ ++TT EDL R FE+CGE+ + + T + +G+ +V+F E
Sbjct: 236 VGNMGFKTTDEDLSRNFEKCGEIEWVKVATFEDTGKCKGYGWVKFVE 282
>UniRef50_Q6DRI6 Cluster: KIAA0682-like; n=7; Danio rerio|Rep:
KIAA0682-like - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 927
Score = 42.7 bits (96), Expect = 0.003
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L + N+ Y T EDL+ +F + G + ++ P D T++ +GFAFV +
Sbjct: 401 LFIRNMPYTCTEEDLKELFSKHGPLSEVLFPIDSLTKKPKGFAFVTY 447
Score = 33.9 bits (74), Expect = 1.6
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKKPWT 280
V N+ ++ T ++LR +F GE+ + +P+ RGF F+ F KK ++
Sbjct: 809 VRNIPFQATVKELRELFCTFGELKTVRLPKKGIGGSHRGFGFIDFLTKQDAKKAFS 864
>UniRef50_Q9LU62 Cluster: Similarity to poly(A)-binding protein II;
n=17; Magnoliophyta|Rep: Similarity to poly(A)-binding
protein II - Arabidopsis thaliana (Mouse-ear cress)
Length = 267
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFEL 256
S+ V N+ Y TPE++++ F+ CG V + I D++ + +GFA+V F E+
Sbjct: 104 SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVEV 153
>UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2;
Ostreococcus|Rep: Initiation factor 3g - Ostreococcus
tauri
Length = 311
Score = 42.7 bits (96), Expect = 0.003
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
S++V NL+ T +DL+ +F G V IY+ +R T E+RGFAFV
Sbjct: 229 SIRVSNLSEDTREQDLQELFRPFGPVTRIYVAINRDTGEARGFAFV 274
>UniRef50_Q9U5E3 Cluster: CiMsi; n=1; Ciona intestinalis|Rep: CiMsi
- Ciona intestinalis (Transparent sea squirt)
Length = 393
Score = 42.7 bits (96), Expect = 0.003
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V L +TT E LR FE GEV D + +D+ T SRGF FV F
Sbjct: 14 VGGLARQTTLEGLRSYFENYGEVSDCVLMKDKETGFSRGFGFVTF 58
>UniRef50_Q93233 Cluster: Putative uncharacterized protein pabp-2;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein pabp-2 - Caenorhabditis elegans
Length = 205
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
S+ V N+ Y T E++ + F CG V + I DR++ +GFA+V F E
Sbjct: 79 SVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTE 128
>UniRef50_A7SIF0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 190
Score = 42.7 bits (96), Expect = 0.003
Identities = 22/52 (42%), Positives = 28/52 (53%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
D L V L TT E LR FE GE+ D+ + D T++SRGF +V F
Sbjct: 11 DPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTF 62
>UniRef50_Q13595 Cluster: Transformer-2 protein homolog; n=57;
Eumetazoa|Rep: Transformer-2 protein homolog - Homo
sapiens (Human)
Length = 282
Score = 42.7 bits (96), Expect = 0.003
Identities = 25/64 (39%), Positives = 32/64 (50%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
D L V L+ TT DLR VF R G + + + D+ T SRGFAFV F + K+
Sbjct: 116 DPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKE 175
Query: 272 PWTR 283
R
Sbjct: 176 AMER 179
>UniRef50_P41891 Cluster: Protein gar2; n=12; Ascomycota|Rep:
Protein gar2 - Schizosaccharomyces pombe (Fission yeast)
Length = 500
Score = 42.7 bits (96), Expect = 0.003
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
V NL++ T +DL F CG++ I +P D + +GF +V F ++ + KK
Sbjct: 370 VGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKK 422
>UniRef50_Q6VYI5 Cluster: TARDBP S8; n=8; Coelomata|Rep: TARDBP S8 -
Mus musculus (Mouse)
Length = 302
Score = 42.3 bits (95), Expect = 0.004
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
L V L ++TT +DL+ F GEV + + +D T S+GF FVRF E T K
Sbjct: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
>UniRef50_Q05C33 Cluster: Tardbp protein; n=14; Coelomata|Rep:
Tardbp protein - Mus musculus (Mouse)
Length = 288
Score = 42.3 bits (95), Expect = 0.004
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
L V L ++TT +DL+ F GEV + + +D T S+GF FVRF E T K
Sbjct: 106 LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVK 160
>UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP1;
n=3; Arabidopsis thaliana|Rep:
Phragmoplastin-interacting protein PHIP1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 597
Score = 42.3 bits (95), Expect = 0.004
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +2
Query: 59 KMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAF 238
K S G P +DG + + NL + TT D+R++F C + + + +++ T E +G+A
Sbjct: 248 KTSSGFAPEMVDGYNRVYIGNLAWDTTERDIRKLFSDC-VINSVRLGKNKETGEFKGYAH 306
Query: 239 VRFFELV 259
V F + V
Sbjct: 307 VDFKDSV 313
>UniRef50_Q8I2R8 Cluster: RNA-binding protein, putative; n=5;
Plasmodium|Rep: RNA-binding protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 202
Score = 42.3 bits (95), Expect = 0.004
Identities = 17/55 (30%), Positives = 34/55 (61%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLK 268
S+ V N+ Y T PE+L+ +F CG + + I ++ T S+G+A++ F + +++
Sbjct: 72 SIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADASSVR 126
>UniRef50_Q54CU2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 306
Score = 42.3 bits (95), Expect = 0.004
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+L V NL RT DLR F G+V D I D T+ESRGF FV +
Sbjct: 72 TLHVSNLNPRTRESDLRDTFASIGKVIDCTILLDPNTKESRGFGFVTY 119
>UniRef50_Q4PBV1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 192
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V NL++ TT + L F G++ D + +DR T SRGF FV F
Sbjct: 7 VGNLSWNTTDDSLAHAFSTYGQLTDYIVMKDRETGRSRGFGFVTF 51
>UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n=1;
Schizosaccharomyces pombe|Rep: mRNA cleavage factor
complex subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 474
Score = 42.3 bits (95), Expect = 0.004
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = +2
Query: 77 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
P R DG + + L + TT + LR FE+ GEV D + RD T SRGF F+ F
Sbjct: 157 PFNREDG--KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTF 211
>UniRef50_A6RJZ8 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 790
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
++ V N+ T E+ R +FE+ G+V + RD T +SRGF FV F
Sbjct: 243 NIYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNF 290
>UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;
Bacteria|Rep: Putative RNA-binding protein rbpA -
Anabaena sp. (strain PCC 7120)
Length = 102
Score = 42.3 bits (95), Expect = 0.004
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
+S+ V NL+Y T + L VF G V + +P DR T + RGF FV
Sbjct: 1 MSIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFV 47
>UniRef50_UPI0000DB6DF2 Cluster: PREDICTED: similar to squid
CG16901-PC, isoform C; n=2; Apocrita|Rep: PREDICTED:
similar to squid CG16901-PC, isoform C - Apis mellifera
Length = 320
Score = 41.9 bits (94), Expect = 0.006
Identities = 25/63 (39%), Positives = 33/63 (52%)
Frame = +2
Query: 83 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVT 262
P D L V L+ TT ++LR F + GE+ I + D YT SRGFAF+ F T
Sbjct: 53 PGKDDERKLFVGGLSRNTTDKELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFTNPKT 112
Query: 263 LKK 271
+ K
Sbjct: 113 IDK 115
Score = 33.9 bits (74), Expect = 1.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V LT T ED++ F + G + ++ P D+ + +GF F+ F
Sbjct: 145 VGGLTPEITDEDIKTYFGQYGTIVELQAPFDKVKNQRKGFCFITF 189
>UniRef50_UPI00005A129E Cluster: PREDICTED: similar to Heterogeneous
nuclear ribonucleoprotein A1 (Helix-destabilizing
protein) (Single-strand binding protein) (hnRNP core
protein A1) (HDP); n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to Heterogeneous nuclear
ribonucleoprotein A1 (Helix-destabilizing protein)
(Single-strand binding protein) (hnRNP core protein A1)
(HDP) - Canis familiaris
Length = 200
Score = 41.9 bits (94), Expect = 0.006
Identities = 23/60 (38%), Positives = 31/60 (51%)
Frame = +2
Query: 62 MSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
MS P + + L + L++ TT E LR FE+ G + D RD T+ SRGF FV
Sbjct: 26 MSKSESPKEPEQLRKLFMGGLSFETTDESLRSHFEQWGTLTDCVEMRDPNTKRSRGFGFV 85
Score = 34.3 bits (75), Expect = 1.2
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 89 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+D ++ V + T LR FE+ G++ I I DR + + RGFAFV F
Sbjct: 93 VDAARNIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTF 145
>UniRef50_Q1LVU9 Cluster: Cold inducible RNA binding protein; n=8;
Clupeocephala|Rep: Cold inducible RNA binding protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 223
Score = 41.9 bits (94), Expect = 0.006
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L + L+Y TT + L F + G + + + RDR T SRGF FV F
Sbjct: 24 LFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTF 70
>UniRef50_Q7XGR3 Cluster: RNA recognition motif family protein,
expressed; n=2; Oryza sativa|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 472
Score = 41.9 bits (94), Expect = 0.006
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+ L TT +DL + E GE+ ++ + +D+ T+E++GFAFV F
Sbjct: 113 IGGLPRDTTEDDLHELCEAFGEISEVRLMKDKETKENKGFAFVTF 157
>UniRef50_Q17DU7 Cluster: RNA binding motif protein; n=3;
Culicidae|Rep: RNA binding motif protein - Aedes aegypti
(Yellowfever mosquito)
Length = 860
Score = 41.9 bits (94), Expect = 0.006
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
NL Y +DL+++FE+ G V +I +P D TR+ +GF V F
Sbjct: 309 NLAYSVKEDDLKQLFEKYGPVAEIDLPIDSNTRKLKGFGMVTF 351
>UniRef50_Q6FQ16 Cluster: Candida glabrata strain CBS138 chromosome
I complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome I complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 211
Score = 41.9 bits (94), Expect = 0.006
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 250
D ++ V N+ + T E L +F + G+V + P+D+ ++E +GFAF+ FF
Sbjct: 3 DPEATIYVGNIDTKVTKELLYELFTQVGQVKKVKYPKDKISQEYQGFAFIEFF 55
>UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41;
Bacteria|Rep: Putative RNA-binding protein rbpB -
Anabaena sp. (strain PCC 7120)
Length = 103
Score = 41.9 bits (94), Expect = 0.006
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
+S+ V NL+Y T E L VF G V + +P DR T RGF FV
Sbjct: 1 MSIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFV 47
>UniRef50_UPI000051A8B9 Cluster: PREDICTED: similar to CG1316-PA;
n=2; Endopterygota|Rep: PREDICTED: similar to CG1316-PA
- Apis mellifera
Length = 482
Score = 41.5 bits (93), Expect = 0.008
Identities = 14/35 (40%), Positives = 27/35 (77%)
Frame = +2
Query: 143 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+DLR+ FE+ G++ DI++ +DR T E++G +++F
Sbjct: 39 DDLRKAFEKFGKIEDIWVVKDRITGENKGVTYIKF 73
Score = 31.9 bits (69), Expect = 6.3
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2
Query: 137 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
T +L++ F + G + + +DR T ES+GF +V+F ++ + K
Sbjct: 132 TDSELQQEFLKFGPIEYATVVKDRNTNESKGFGYVKFKKVSSAAK 176
>UniRef50_Q9ZVW9 Cluster: Putative splicing factor; n=3; Arabidopsis
thaliana|Rep: Putative splicing factor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 561
Score = 41.5 bits (93), Expect = 0.008
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +2
Query: 83 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFEL 256
P G L V NL + +DLR+VFE G V + +PRD T +GF FV+F L
Sbjct: 279 PYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDE-TGLCKGFGFVQFARL 335
>UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:
F3F9.20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 302
Score = 41.5 bits (93), Expect = 0.008
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2
Query: 65 SYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 244
SY R P + V L + T +++RR FE+ GE+ + I D+ T +S+G+ FV
Sbjct: 5 SYYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVT 64
Query: 245 FFE 253
F E
Sbjct: 65 FRE 67
>UniRef50_Q10RZ0 Cluster: RNA recognition motif family protein,
expressed; n=2; Oryza sativa|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 110
Score = 41.5 bits (93), Expect = 0.008
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 134 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
T EDLRR F+ G V +++P DR+T GFAF++F
Sbjct: 18 TGDEDLRRHFQLFGYVASVHMPIDRHTGRHHGFAFIQF 55
>UniRef50_A7PNS9 Cluster: Chromosome chr8 scaffold_23, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr8 scaffold_23, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 293
Score = 41.5 bits (93), Expect = 0.008
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+++V NL+ T DLR +F R G++ +Y+ D T SRGF +V F
Sbjct: 213 AVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGFGYVNF 260
>UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 288
Score = 41.5 bits (93), Expect = 0.008
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 89 IDGMVS--LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+DG S L V N+ + TT EDLR +F CG V + IP R R SRG+ V F
Sbjct: 3 VDGGSSARLYVGNIPWSTTIEDLRELFAECGGVTRVDIPTGRQGR-SRGYGLVEF 56
Score = 33.5 bits (73), Expect = 2.1
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 83 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
P + + V NL + TT EDLR+VF++ G V + T S+G+ V F
Sbjct: 203 PENSSGLQIVVRNLPWTTTSEDLRQVFQQVGNVVNAVAVCHTDTGRSKGWGTVLF 257
>UniRef50_Q5CWM4 Cluster: U2 snRNP. Hsh49p, RRM domain containing
protein; n=3; Cryptosporidium|Rep: U2 snRNP. Hsh49p, RRM
domain containing protein - Cryptosporidium parvum Iowa
II
Length = 216
Score = 41.5 bits (93), Expect = 0.008
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+L NL + E L +F +CG V ++IPRD+ T GF F+ F
Sbjct: 24 TLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHHSGFGFIEF 71
>UniRef50_A7RXI1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 424
Score = 41.5 bits (93), Expect = 0.008
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 131 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
R ED+R FE+ G + D+++ +D+ T+E+RG +V+F
Sbjct: 27 RHNAEDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 65
Score = 39.1 bits (87), Expect = 0.041
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 143 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVT 262
EDLR FE G++ + I RD TRE++G+ +V+F + T
Sbjct: 126 EDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSST 165
>UniRef50_A7RU25 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 291
Score = 41.5 bits (93), Expect = 0.008
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V L Y TT +++ F R GE+ + D TR SRGF FVRF
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRF 163
Score = 32.3 bits (70), Expect = 4.7
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +2
Query: 53 LLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 232
L ++ RP ++ L V L TT + L F + GEV D+YIP + R F
Sbjct: 183 LCEVRLPRPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIP-----KPFRHF 237
Query: 233 AFVRF 247
FV F
Sbjct: 238 GFVTF 242
>UniRef50_Q1DZF7 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 334
Score = 41.5 bits (93), Expect = 0.008
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +2
Query: 59 KMSYGRPPPRIDGMVSLK----VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESR 226
+ S RP P DG ++ K V NL + T DL+ F +CG V + + D Y S+
Sbjct: 125 RFSIRRPKP--DGYIAPKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYD-YRGVSK 181
Query: 227 GFAFVRFFELVTLKK 271
GF +V+F ++ T +K
Sbjct: 182 GFGYVKFHDVETAEK 196
>UniRef50_A7TPL8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 467
Score = 41.5 bits (93), Expect = 0.008
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
S+ V N+ + E L FE CGE+ + I RD T +GFA+++F +L ++ K
Sbjct: 296 SIFVGNMDFEQDEETLWSHFESCGEIEYVRIIRDSKTNLGKGFAYIQFKDLQSVNK 351
>UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=11;
Pezizomycotina|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Coccidioides immitis
Length = 768
Score = 41.5 bits (93), Expect = 0.008
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V N+ TT E+ R +FE+ GE+ + RD + +SRGF FV F
Sbjct: 240 VKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNF 284
Score = 33.1 bits (72), Expect = 2.7
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
SL V L T L +F G+V I + RD TR S G+A+V +
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 103
>UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=74;
cellular organisms|Rep: Glycine-rich RNA-binding protein
8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 169
Score = 41.5 bits (93), Expect = 0.008
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V L + T EDL+R F + G+V D I DR + SRGF FV F
Sbjct: 10 VGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTF 54
>UniRef50_Q2JXW7 Cluster: Putative RNA-binding protein; n=2;
Synechococcus|Rep: Putative RNA-binding protein -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 83
Score = 41.1 bits (92), Expect = 0.010
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
+++ V NL Y+ + E+L F++ V + IP DR T ++RGFAFV
Sbjct: 1 MTIFVGNLNYKASTEELAAFFQQRWNVKSVTIPIDRETGQTRGFAFV 47
>UniRef50_Q0F212 Cluster: RNA-binding region RNP-1; n=1;
Mariprofundus ferrooxydans PV-1|Rep: RNA-binding region
RNP-1 - Mariprofundus ferrooxydans PV-1
Length = 81
Score = 41.1 bits (92), Expect = 0.010
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
+++ V N+++ T+ E+LR +F R G V + + T +SRGF FV
Sbjct: 1 MNINVGNMSFSTSDEELRELFSRFGTVASATVVTNNETNQSRGFGFV 47
>UniRef50_Q9SVM7 Cluster: RNA-binding protein like; n=1; Arabidopsis
thaliana|Rep: RNA-binding protein like - Arabidopsis
thaliana (Mouse-ear cress)
Length = 126
Score = 41.1 bits (92), Expect = 0.010
Identities = 20/43 (46%), Positives = 25/43 (58%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+L+ TT + LR F G V D + RDRYT SRGF FV +
Sbjct: 48 DLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTY 90
>UniRef50_Q5K249 Cluster: Putative glycine-rich RNA-binding protein;
n=1; Guillardia theta|Rep: Putative glycine-rich
RNA-binding protein - Guillardia theta (Cryptomonas phi)
Length = 152
Score = 41.1 bits (92), Expect = 0.010
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
V L + T EDLR +F G + D + DR T SRGF FV F E
Sbjct: 65 VSGLPWALTSEDLRDLFAEFGAIQDANVVYDRETGRSRGFGFVTFAE 111
>UniRef50_Q1PEP5 Cluster: Nucleolin; n=2; Arabidopsis thaliana|Rep:
Nucleolin - Arabidopsis thaliana (Mouse-ear cress)
Length = 636
Score = 41.1 bits (92), Expect = 0.010
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2
Query: 143 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
++LR F +CGEV +++P DR T SRGFA++
Sbjct: 497 KELRSHFSKCGEVTRVHVPTDRETGASRGFAYI 529
>UniRef50_Q01B63 Cluster: RNA recognition motif; n=2;
Ostreococcus|Rep: RNA recognition motif - Ostreococcus
tauri
Length = 907
Score = 41.1 bits (92), Expect = 0.010
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V NL Y T E++ +FE+ G++ ++I DR T+ S+G A+V F
Sbjct: 366 VRNLPYTATEEEVAELFEQFGKLSAVHILVDRSTKRSKGLAYVTF 410
>UniRef50_A7P058 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 272
Score = 41.1 bits (92), Expect = 0.010
Identities = 23/49 (46%), Positives = 27/49 (55%)
Frame = +2
Query: 68 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 214
YG D SL V NL + EDLRR F + G + DIY+PRD YT
Sbjct: 27 YGGRGSARDLPTSLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPRDYYT 75
>UniRef50_A3AAN7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 304
Score = 41.1 bits (92), Expect = 0.010
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV---RFFELV 259
V L + TT E LRR ++R GE+ + + DR++ S+G+ FV RFF V
Sbjct: 41 VGGLAWETTSERLRRFYDRFGEILEAVVITDRHSGRSKGYGFVSALRFFAAV 92
>UniRef50_Q95ZH1 Cluster: RBD protein; n=1; Chironomus tentans|Rep:
RBD protein - Chironomus tentans (Midge)
Length = 849
Score = 41.1 bits (92), Expect = 0.010
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
NL Y T +D++ VFE+ G V ++ +P D TR+ +GF V F
Sbjct: 323 NLPYTVTEDDVQTVFEKYGNVVEVNVPIDPTTRKIKGFGTVTF 365
Score = 34.7 bits (76), Expect = 0.89
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+G + V N+ ++ ++R++F+ GE+ + +P+ + RGF F+ F
Sbjct: 718 EGSTKIMVRNIPFQANANEIRQLFQVFGELKAVRLPKKPGIDQHRGFGFIDF 769
>UniRef50_Q5DH48 Cluster: SJCHGC06087 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06087 protein - Schistosoma
japonicum (Blood fluke)
Length = 390
Score = 41.1 bits (92), Expect = 0.010
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
D L V L++ T DL+ F R G+V I DR+T SRGF FV
Sbjct: 56 DDSRKLFVGGLSWETNESDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFV 105
>UniRef50_Q5CWK5 Cluster: 5x RRM. Mrd1p like, splicing related; n=3;
Cryptosporidium|Rep: 5x RRM. Mrd1p like, splicing
related - Cryptosporidium parvum Iowa II
Length = 806
Score = 41.1 bits (92), Expect = 0.010
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V N++Y TT EDL + F + GEV + I R + S+G+ FV++
Sbjct: 289 LMVVNISYSTTEEDLNKFFSKWGEVKSVNIIRSPESGVSKGYGFVQY 335
>UniRef50_Q1HE01 Cluster: Cbp20; n=6; Eukaryota|Rep: Cbp20 - Bombyx
mori (Silk moth)
Length = 154
Score = 41.1 bits (92), Expect = 0.010
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFF 250
+L + NL++ TT E + ++ RCG++ + + D+Y + GF FV ++
Sbjct: 31 TLYMGNLSFYTTEEQIYELYSRCGDIRRVIMGLDKYKKTPCGFCFVEYY 79
>UniRef50_A7RLV0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 862
Score = 41.1 bits (92), Expect = 0.010
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
NL Y + ED++ +FE+ G + ++ +P D++T ++ G FV F
Sbjct: 369 NLAYSCSEEDIQHLFEKFGPLSEVNLPLDKHTNKTIGIGFVTF 411
>UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia
japonica|Rep: HnRNP A2/B1 protein - Dugesia japonica
(Planarian)
Length = 386
Score = 41.1 bits (92), Expect = 0.010
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
V L +TT D+R+ F + G+V D+ RD+ +SRGF FV F E
Sbjct: 22 VGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTGNKSRGFGFVVFKE 68
Score = 36.3 bits (80), Expect = 0.29
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +2
Query: 137 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
T +DL+ F GE+ D I RD + SRGFAF+ F
Sbjct: 121 TEDDLKDYFSTFGEIVDCTIKRDNVSGLSRGFAFITF 157
>UniRef50_A0CBK1 Cluster: Chromosome undetermined scaffold_164,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_164,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 601
Score = 41.1 bits (92), Expect = 0.010
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
V NL++ T + L +FE CG++ ++ I +D +SRGF +V +F+ + +K
Sbjct: 451 VGNLSFYATEDSLYPIFEDCGKIKEVRIAKDA-EGKSRGFGYVEYFDNASAQK 502
>UniRef50_Q5KC60 Cluster: Polyadenylation factor 64 kDa subunit,
putative; n=2; Filobasidiella neoformans|Rep:
Polyadenylation factor 64 kDa subunit, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 455
Score = 41.1 bits (92), Expect = 0.010
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVT 262
V N+ Y + E L VF G V ++ I D T S+G+AFV+F++ T
Sbjct: 11 VANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEAT 60
>UniRef50_A2QMQ9 Cluster: Function: AUF1 of H. sapiens is a
component of the ribonucleosomes; n=16;
Pezizomycotina|Rep: Function: AUF1 of H. sapiens is a
component of the ribonucleosomes - Aspergillus niger
Length = 315
Score = 41.1 bits (92), Expect = 0.010
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 244
+L V + R T D+ R+FE+ G+V + I D +T+ESRGF FV+
Sbjct: 68 NLFVTGIHPRLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVK 114
>UniRef50_Q09301 Cluster: Putative RNA-binding protein EEED8.12;
n=4; Caenorhabditis|Rep: Putative RNA-binding protein
EEED8.12 - Caenorhabditis elegans
Length = 197
Score = 41.1 bits (92), Expect = 0.010
Identities = 14/48 (29%), Positives = 31/48 (64%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
S+ + N+ + +T E++ F+ CG + IP+D++T++ + FA++ F
Sbjct: 62 SVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEF 109
>UniRef50_P19339 Cluster: Protein sex-lethal; n=41; Diptera|Rep:
Protein sex-lethal - Drosophila melanogaster (Fruit fly)
Length = 354
Score = 41.1 bits (92), Expect = 0.010
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +2
Query: 56 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 235
LK+SY RP +L V NL T + L +F + G + I RD+ T RG A
Sbjct: 196 LKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 255
Query: 236 FVRF 247
FVR+
Sbjct: 256 FVRY 259
>UniRef50_Q57014 Cluster: Putative RNA-binding protein rbpA; n=70;
cellular organisms|Rep: Putative RNA-binding protein
rbpA - Synechocystis sp. (strain PCC 6803)
Length = 101
Score = 41.1 bits (92), Expect = 0.010
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 101 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
+S+ V NL+Y + DL VF G V + +P DR T RGF FV
Sbjct: 1 MSIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFV 47
>UniRef50_Q4SJ02 Cluster: Chromosome 21 SCAF14577, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 21 SCAF14577, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 278
Score = 40.7 bits (91), Expect = 0.014
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
V L Y TT LR+ FE GE+ + + DR T +SRG+ FV
Sbjct: 15 VGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFV 57
>UniRef50_Q7NHK5 Cluster: RNA-binding protein; n=10; cellular
organisms|Rep: RNA-binding protein - Gloeobacter
violaceus
Length = 123
Score = 40.7 bits (91), Expect = 0.014
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
V NL + T +D+ F G V + IP DR T RGFAFV
Sbjct: 5 VGNLPFSVTEQDITEAFSEYGTVKSVKIPTDRETGRPRGFAFV 47
>UniRef50_Q6AWW6 Cluster: At2g47310; n=2; Arabidopsis thaliana|Rep:
At2g47310 - Arabidopsis thaliana (Mouse-ear cress)
Length = 512
Score = 40.7 bits (91), Expect = 0.014
Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 92 DGMVS-LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
DG ++ L V ++ T D+R+VFE+ G V +I +P+D+ T E + F+++
Sbjct: 106 DGSIAKLYVAPISKTATEYDIRQVFEKYGNVTEIILPKDKMTGERAAYCFIKY 158
>UniRef50_Q67W00 Cluster: Putative RRM-containing protein; n=2;
Oryza sativa|Rep: Putative RRM-containing protein -
Oryza sativa subsp. japonica (Rice)
Length = 343
Score = 40.7 bits (91), Expect = 0.014
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
V L + T E LRR FE+ GE+ + + DR T S+G+ FV F E
Sbjct: 43 VGGLAWETPSEGLRRHFEQYGEILEAVVIADRLTGRSKGYGFVTFRE 89
>UniRef50_A7QT53 Cluster: Chromosome undetermined scaffold_165,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_165, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 209
Score = 40.7 bits (91), Expect = 0.014
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
S+ V N+ Y TPE++++ F+ CG V + I ++Y + +G+A+V F E
Sbjct: 35 SVFVGNVDYSCTPEEVQQHFQACGTVNRVTIRSNKY-GQPKGYAYVEFLE 83
>UniRef50_A7P7U7 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 939
Score = 40.7 bits (91), Expect = 0.014
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V NL ++ +++ +F G V D +IP++ T SRGFAFV+F
Sbjct: 269 LIVRNLPFKAKVTEIKDIFSSAGFVWDAFIPQNSETGLSRGFAFVKF 315
>UniRef50_Q86EX2 Cluster: Clone ZZD1336 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD1336 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 210
Score = 40.7 bits (91), Expect = 0.014
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
SL + +L +DLRR F R G + D+ IP D +T +G+AF+ F
Sbjct: 7 SLYIRHLPDTCRHDDLRRCFGRYGRIVDVTIPLDFFTGRMKGYAFIEF 54
>UniRef50_Q3HM26 Cluster: Sex-lethal isoform 1; n=4; Bombyx
mori|Rep: Sex-lethal isoform 1 - Bombyx mori (Silk moth)
Length = 336
Score = 40.7 bits (91), Expect = 0.014
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = +2
Query: 56 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 235
LK+SY RP +L V NL T + L +F + G + +I RD+ + RG A
Sbjct: 134 LKVSYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVA 193
Query: 236 FVRF 247
FVR+
Sbjct: 194 FVRY 197
>UniRef50_A7AWX7 Cluster: RNA recognition motif. (A.k.a. RRM, RBD,
or RNP) domain containing protein; n=1; Babesia
bovis|Rep: RNA recognition motif. (A.k.a. RRM, RBD, or
RNP) domain containing protein - Babesia bovis
Length = 110
Score = 40.7 bits (91), Expect = 0.014
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L + L T+ +R F + GE+ + YIPRD YT + +GF F+ F
Sbjct: 31 LFIGRLDPDTSVGTMRHYFGQFGEIAEAYIPRDSYTLKGKGFGFLTF 77
>UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 40.7 bits (91), Expect = 0.014
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+ NL Y D+ VF + GE+ D+++ RD+ T +S+GF F+ +
Sbjct: 33 IANLNYAMNEGDIAIVFSQYGEIVDVHLVRDKITGKSKGFCFLAY 77
>UniRef50_Q7SGB3 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Neurospora crassa
Length = 193
Score = 40.7 bits (91), Expect = 0.014
Identities = 21/50 (42%), Positives = 27/50 (54%)
Frame = +2
Query: 98 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
M L V L++ T LR FE G V + + +DR T SRGF FVR+
Sbjct: 1 MAKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRY 50
>UniRef50_Q7RXY7 Cluster: Putative uncharacterized protein
NCU00457.1; n=3; Pezizomycotina|Rep: Putative
uncharacterized protein NCU00457.1 - Neurospora crassa
Length = 559
Score = 40.7 bits (91), Expect = 0.014
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKKPWTR 283
NL+Y T E + FE C +V ++ I DR T+ +GFA+ F ++ LK TR
Sbjct: 87 NLSYNATAESVTEFFEGC-DVVNVRIIEDRETQRPKGFAYAEFKDVEGLKTALTR 140
>UniRef50_Q0CIN3 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 306
Score = 40.7 bits (91), Expect = 0.014
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 244
+L V + R T D+ R+FE+ G+V + I D +T+ESRGF FV+
Sbjct: 56 NLFVTGIHPRLTEADISRLFEKYGDVENCSIMVDPHTKESRGFGFVK 102
>UniRef50_Q06106 Cluster: Multiple RNA-binding domain-containing
protein 1; n=7; Saccharomycetales|Rep: Multiple
RNA-binding domain-containing protein 1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 887
Score = 40.7 bits (91), Expect = 0.014
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
N+ Y + ED R++F GE+ ++++ D T +S+GFA+V F
Sbjct: 351 NILYTSKEEDFRKLFSPFGELEEVHVALDTRTGQSKGFAYVLF 393
Score = 36.3 bits (80), Expect = 0.29
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V NL + T +D+ +F G++ + +P+ ++ + +RGFAFV F
Sbjct: 767 VKNLPFEATRKDVFELFNSFGQLKSVRVPK-KFDKSARGFAFVEF 810
>UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein
D0; n=123; Deuterostomia|Rep: Heterogeneous nuclear
ribonucleoprotein D0 - Homo sapiens (Human)
Length = 355
Score = 40.7 bits (91), Expect = 0.014
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
+ L++ TT +DL+ F + GEV D + D T SRGF FV F E ++ K
Sbjct: 101 IGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDK 153
Score = 38.7 bits (86), Expect = 0.055
Identities = 21/53 (39%), Positives = 27/53 (50%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
V L+ T E +R F GEV I +P D T + RGF F+ F E +KK
Sbjct: 186 VGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
>UniRef50_Q15717 Cluster: ELAV-like protein 1; n=28; Tetrapoda|Rep:
ELAV-like protein 1 - Homo sapiens (Human)
Length = 326
Score = 40.7 bits (91), Expect = 0.014
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 56 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 235
+K+SY RP + +L + L T +D+ +F R G + + + D+ T SRG A
Sbjct: 91 IKVSYARPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVA 150
Query: 236 FVRF 247
F+RF
Sbjct: 151 FIRF 154
Score = 34.3 bits (75), Expect = 1.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 95 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
G +L V+ L T ++LR +F GEV + RD+ S G+ FV +
Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNY 68
>UniRef50_UPI0000E4A86C Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 352
Score = 40.3 bits (90), Expect = 0.018
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V L+ TT DLR V+E G + ++ + D T SRGFAFV F
Sbjct: 116 LGVFGLSLYTTERDLRDVYEHYGTLTNVNVVYDHQTGRSRGFAFVMF 162
>UniRef50_UPI0000E47201 Cluster: PREDICTED: similar to
developmentally regulated RNA-binding protein 1; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
developmentally regulated RNA-binding protein 1 -
Strongylocentrotus purpuratus
Length = 507
Score = 40.3 bits (90), Expect = 0.018
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +2
Query: 137 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
T DL+ F + GEV D+++ +D+ TRE +G A+V+F
Sbjct: 39 TESDLKDYFGQFGEVEDVFLVKDKVTREPKGVAYVKF 75
>UniRef50_Q9FX45 Cluster: RNA-binding glycine-rich protein,
putative; n=1; Arabidopsis thaliana|Rep: RNA-binding
glycine-rich protein, putative - Arabidopsis thaliana
(Mouse-ear cress)
Length = 181
Score = 40.3 bits (90), Expect = 0.018
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 47 SILLKMSYGRPPPRIDG-MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 223
S L S PP G L V L++RTT + LR FE+ G + + + D+
Sbjct: 58 SCLSTDSSSSPPSSSSGPKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRP 117
Query: 224 RGFAFVRF 247
+GFAF+R+
Sbjct: 118 KGFAFLRY 125
>UniRef50_Q9FFZ6 Cluster: Similarity to RNA-binding protein; n=2;
core eudicotyledons|Rep: Similarity to RNA-binding
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 40.3 bits (90), Expect = 0.018
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L + L++ TT + L F +CG+V + I DR + S+GF FV F
Sbjct: 36 LFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTF 82
>UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6;
cellular organisms|Rep: Glycin-rich RNA binding protein
- Polytomella sp. Pringsheim 198.80
Length = 177
Score = 40.3 bits (90), Expect = 0.018
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
L V NL++ EDLR F + GEV + I DR + SRGF FV
Sbjct: 5 LYVGNLSWNAKEEDLRTYFGKFGEVEEASIALDRESGRSRGFGFV 49
>UniRef50_O81989 Cluster: Cp33Hv; n=4; BEP clade|Rep: Cp33Hv -
Hordeum vulgare (Barley)
Length = 344
Score = 40.3 bits (90), Expect = 0.018
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
V NL Y T +L F G V D+ I D+ T SRGFAFV
Sbjct: 112 VGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFV 154
>UniRef50_A7NUC5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 494
Score = 40.3 bits (90), Expect = 0.018
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V L+ T E+ + FER G + D+ + D TR RGF F+ F
Sbjct: 127 VGGLSSNLTEEEFKNYFERFGRITDVVVMHDSATRRPRGFGFITF 171
>UniRef50_Q5BT94 Cluster: SJCHGC02233 protein; n=2; Bilateria|Rep:
SJCHGC02233 protein - Schistosoma japonicum (Blood
fluke)
Length = 65
Score = 40.3 bits (90), Expect = 0.018
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V NL Y T ++L ++F G + DI++ D +++ S+GFAFV +
Sbjct: 7 LFVRNLPYDCTEKELEKLFSPYGSLSDIHLAFDSWSQVSKGFAFVTY 53
>UniRef50_Q4QA46 Cluster: RNA-binding protein, putative, UPB1; n=12;
Trypanosomatidae|Rep: RNA-binding protein, putative,
UPB1 - Leishmania major
Length = 177
Score = 40.3 bits (90), Expect = 0.018
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +2
Query: 83 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
P + + +L V+ + LR++FER G + + I DR TR+SRG+ FV++
Sbjct: 33 PEPEALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRETRQSRGYGFVKY 87
>UniRef50_Q75E07 Cluster: ABL134Cp; n=1; Eremothecium gossypii|Rep:
ABL134Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 375
Score = 40.3 bits (90), Expect = 0.018
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +2
Query: 53 LLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 232
L+ MS PP RI L V NL++ TT E L++ F+ CGE+ I + + + + +GF
Sbjct: 206 LISMSKN-PPSRI-----LFVGNLSFDTTDELLKKHFQHCGEIVKIRMATFQDSGKCKGF 259
Query: 233 AFVRF 247
AFV F
Sbjct: 260 AFVDF 264
>UniRef50_Q2H622 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 361
Score = 40.3 bits (90), Expect = 0.018
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L + N+ Y TT +L R+F+ G V D+ + DR T RGFA F
Sbjct: 233 LFIGNIPYETTDAELNRIFQGMGNVKDVRVAVDRTTGWPRGFAHADF 279
>UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22;
Endopterygota|Rep: RNA-binding protein squid -
Drosophila melanogaster (Fruit fly)
Length = 344
Score = 40.3 bits (90), Expect = 0.018
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
L V L++ TT ++LR F + GE+ I + D T SRGFAF+ F + K
Sbjct: 58 LFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDK 112
>UniRef50_Q9BX46 Cluster: RNA-binding protein 24; n=52;
Eumetazoa|Rep: RNA-binding protein 24 - Homo sapiens
(Human)
Length = 236
Score = 40.3 bits (90), Expect = 0.018
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
V L Y TT LR+ FE GE+ + + DR T +SRG+ FV
Sbjct: 15 VGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFV 57
>UniRef50_Q4WJT7 Cluster: Multiple RNA-binding domain-containing
protein 1; n=8; Eurotiomycetidae|Rep: Multiple
RNA-binding domain-containing protein 1 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 825
Score = 40.3 bits (90), Expect = 0.018
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
L V NL Y + DL VF + G++ +I++ D + S+GFA+V++ E
Sbjct: 303 LFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIE 351
Score = 35.9 bits (79), Expect = 0.39
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+ NL ++ T +D+R +F G++ + +P+ ++ R +RGF F F
Sbjct: 706 IKNLPFQATKKDVRSLFGAYGQLRSVRVPK-KFDRSARGFGFADF 749
>UniRef50_UPI000049956B Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 297
Score = 39.9 bits (89), Expect = 0.024
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +2
Query: 56 LKMSYGRPPP----RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 223
+K++Y P +++ + V ++ TT L ++F +CG+V + IP R T +
Sbjct: 93 MKLNYKHLPKTTQKKMNNSYCIFVGKVSSITTESTLVKIFAKCGKVLRVTIPIWRNTNKR 152
Query: 224 RGFAFVRFFELVTLKK 271
RGFA V F L +++K
Sbjct: 153 RGFAVVEFASLASVEK 168
>UniRef50_UPI000065DEA8 Cluster: RNA-binding protein 24 (RNA-binding
motif protein 24) (RNA-binding region-containing protein
6).; n=1; Takifugu rubripes|Rep: RNA-binding protein 24
(RNA-binding motif protein 24) (RNA-binding
region-containing protein 6). - Takifugu rubripes
Length = 258
Score = 39.9 bits (89), Expect = 0.024
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV---RFFELVTLKKPWTR 283
V L Y TT LR+ FE G++ + + DR T +SRG+ FV F + + P TR
Sbjct: 15 VGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVSSNMFRSIRHFRSPGTR 74
>UniRef50_Q569S7 Cluster: LOC443584 protein; n=5; Xenopus|Rep:
LOC443584 protein - Xenopus laevis (African clawed frog)
Length = 414
Score = 39.9 bits (89), Expect = 0.024
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
D S V NL Y E +R+ F +CG+V + I RD+ T +GF +V F
Sbjct: 270 DNKRSAFVGNLPYDIEEESIRKHFSQCGDVQGVRIIRDQKTGIGKGFGYVLF 321
>UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1;
Treponema pallidum|Rep: RNA-binding protein, putative -
Treponema pallidum
Length = 105
Score = 39.9 bits (89), Expect = 0.024
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
V NL Y TT L +F + GEV + + +D+ T+ S+GF FV
Sbjct: 23 VGNLNYATTEAGLASLFSQFGEVLSVAVIKDKLTQRSKGFGFV 65
>UniRef50_Q4UFE0 Cluster: Nucleolar, RNA-binding protein, putative;
n=2; Theileria|Rep: Nucleolar, RNA-binding protein,
putative - Theileria annulata
Length = 560
Score = 39.9 bits (89), Expect = 0.024
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
+ NL + ++ E LR +F CG+V Y+P+ + T + G F+ F + K+
Sbjct: 425 IRNLNFNSSEEGLRELFSECGQVTRCYVPKFQDTGKPMGIGFISFTTVEAAKR 477
>UniRef50_Q4QHE5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 950
Score = 39.9 bits (89), Expect = 0.024
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = +2
Query: 65 SYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT----RES--R 226
S R PP D L V NL + T +D+R +F E+ + +PR +T RE+ R
Sbjct: 853 SASRVPPGSDPQ-KLIVKNLPFEATEKDVRELFSAFSEIRTVRVPRKSHTFSSHRENNHR 911
Query: 227 GFAFVRF 247
GFAFV F
Sbjct: 912 GFAFVEF 918
Score = 34.3 bits (75), Expect = 1.2
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRR-VFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+++ N+ Y T E L++ G V ++IP + TR+++G AFVRF
Sbjct: 369 IRLGNIPYIATEEHLKQFAASLVGPVEAVHIPLTKDTRQNKGAAFVRF 416
>UniRef50_Q4QE23 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 342
Score = 39.9 bits (89), Expect = 0.024
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 71 GRPP--PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 244
GRP D ++L V L + R FE GE+ + RD +T ESRGF FVR
Sbjct: 12 GRPSVATAADSKLNLLVRFLDHGVDDSQFRVFFEPFGEITSSMVMRDIFTGESRGFGFVR 71
Query: 245 F 247
F
Sbjct: 72 F 72
>UniRef50_Q245K5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 284
Score = 39.9 bits (89), Expect = 0.024
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
++ V +L Y E L+ FE+ G + +I + R R T S+GFAF++F
Sbjct: 126 TIYVGHLPYGLLEEQLKTYFEQYGTIVNIKVARSRKTARSKGFAFIQF 173
>UniRef50_A7AW01 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 279
Score = 39.9 bits (89), Expect = 0.024
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V NL Y T +LR + + CG + I +DR T +S+G+A V +
Sbjct: 25 VGNLPYEITEIELRNILQGCGNIRFAIIRKDRQTNKSKGYAHVEY 69
>UniRef50_A0BZZ4 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_14, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 260
Score = 39.9 bits (89), Expect = 0.024
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
++ + NL + T + + +F +CG V +++IP+D+ + E +G+ FV F
Sbjct: 20 TIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEF 67
>UniRef50_A6NDY0 Cluster: Uncharacterized protein ENSP00000367609;
n=5; Catarrhini|Rep: Uncharacterized protein
ENSP00000367609 - Homo sapiens (Human)
Length = 278
Score = 39.9 bits (89), Expect = 0.024
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 71 GRPPPRIDG-MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
G P +++ S+ V N+ Y + E+L F RCGEV + I D+++ +G+A++ F
Sbjct: 136 GTPEEKVEADHRSVYVGNVDYGGSAEELEAHFSRCGEVHRVTILCDKFSGHPKGYAYIEF 195
>UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 341
Score = 39.9 bits (89), Expect = 0.024
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+L + NL Y T E L++VF R GEV + I D SRGF +V F
Sbjct: 150 TLYIGNLYYEVTTEQLQKVFSRFGEVASVKIVYDN-RGMSRGFGYVEF 196
>UniRef50_A5DDT0 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 886
Score = 39.9 bits (89), Expect = 0.024
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Frame = +2
Query: 47 SILLKMSYGRPPPRIDGMVSLK-----VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRY 211
S L ++ RPP +I+ + V NL Y TT +LR VFE+ GE+ +I +P +
Sbjct: 666 SFKLVVAISRPPKKIETRKQVMHRQVCVKNLDYYTTESELRTVFEKHGELEEISLPIKKD 725
Query: 212 TRE----SRGFAFVRF 247
R + G+AFV F
Sbjct: 726 MRNKGHVNGGYAFVTF 741
Score = 33.1 bits (72), Expect = 2.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 74 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGD 187
+P R + +KV+N+ T DL+ +F CGE+ D
Sbjct: 510 KPAARNRESLKIKVENIPKSATENDLKLIFSDCGEIAD 547
>UniRef50_P19684 Cluster: 33 kDa ribonucleoprotein, chloroplast
precursor; n=8; core eudicotyledons|Rep: 33 kDa
ribonucleoprotein, chloroplast precursor - Nicotiana
sylvestris (Wood tobacco)
Length = 324
Score = 39.9 bits (89), Expect = 0.024
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
L V NL + T L +F G V ++ I DR T SRGFAFV
Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFV 160
>UniRef50_Q6CEW9 Cluster: Multiple RNA-binding domain-containing
protein 1; n=1; Yarrowia lipolytica|Rep: Multiple
RNA-binding domain-containing protein 1 - Yarrowia
lipolytica (Candida lipolytica)
Length = 828
Score = 39.9 bits (89), Expect = 0.024
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
NL Y ED R++F + GE+ ++++P + T + +GFA V+F
Sbjct: 307 NLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQF 349
Score = 37.1 bits (82), Expect = 0.17
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +2
Query: 89 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
ID + +K NL + T +D++++F G + + +P+ ++ ESRGFAF +
Sbjct: 701 IDSKILIK--NLPFEATKKDVQKLFGAFGSLKTVRVPK-KFNSESRGFAFAEY 750
>UniRef50_O13620 Cluster: Multiple RNA-binding domain-containing
protein 1; n=1; Schizosaccharomyces pombe|Rep: Multiple
RNA-binding domain-containing protein 1 -
Schizosaccharomyces pombe (Fission yeast)
Length = 833
Score = 39.9 bits (89), Expect = 0.024
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 253
NLTY +DL+ +F G++ +++P D+ T +GFA++ F +
Sbjct: 329 NLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHD 373
Score = 33.9 bits (74), Expect = 1.6
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+ NL + T +D++ + G++ + +P+ ++ R +RGFAF F
Sbjct: 725 IKNLPFEATKKDVQSLLGAYGQLRSVRVPK-KFDRSARGFAFAEF 768
>UniRef50_Q39SC4 Cluster: RNA-binding region RNP-1; n=2;
Geobacter|Rep: RNA-binding region RNP-1 - Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
Length = 134
Score = 39.5 bits (88), Expect = 0.031
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
L V +++Y T +DLRR+F G V +++ DR T E +G +VR + K+
Sbjct: 7 LYVGHMSYEATEDDLRRLFTVAGTVTSVHLITDRDTGEFKGCGYVRMATIEEAKE 61
>UniRef50_Q9LNV4 Cluster: F22G5.31; n=12; Magnoliophyta|Rep:
F22G5.31 - Arabidopsis thaliana (Mouse-ear cress)
Length = 415
Score = 39.5 bits (88), Expect = 0.031
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCG---EVGDIYIPRDRYTRESRGFAFV 241
SL V L++R T DL F + G +V D+++ D +TRESRGF F+
Sbjct: 108 SLYVTGLSHRVTERDLEDHFAKEGKVVDVTDVHLVLDPWTRESRGFGFI 156
>UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1;
Physcomitrella patens|Rep: Glycine-rich RNA-binding
protein - Physcomitrella patens (Moss)
Length = 155
Score = 39.5 bits (88), Expect = 0.031
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V L + TT ++++ F GEV ++ I DR T SRGF FV F
Sbjct: 44 LFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTF 90
>UniRef50_Q67XI5 Cluster: Putative uncharacterized protein
At4g20030; n=3; Arabidopsis thaliana|Rep: Putative
uncharacterized protein At4g20030 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 152
Score = 39.5 bits (88), Expect = 0.031
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+ V NL + T+ + L+R F GE+ ++ + +D + S+G+AF++F
Sbjct: 42 IMVRNLPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQF 88
>UniRef50_Q2I310 Cluster: RNA recognition motif-containing protein;
n=9; Magnoliophyta|Rep: RNA recognition motif-containing
protein - Vitis pseudoreticulata
Length = 194
Score = 39.5 bits (88), Expect = 0.031
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
S+ + NL R + L + + G V D+YIPRD+ T +GFAF +
Sbjct: 8 SVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEY 55
>UniRef50_A7NYH5 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=12; Eukaryota|Rep: Chromosome chr6
scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 429
Score = 39.5 bits (88), Expect = 0.031
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V + + T DL VF + GE+ D+ + RD+ T +S+GFAFV +
Sbjct: 40 VGGIPFDLTEGDLLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAY 84
>UniRef50_A5BUJ6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 312
Score = 39.5 bits (88), Expect = 0.031
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
V NL + T E L +F + G V ++Y+P+DR T +G+ FV F
Sbjct: 29 VGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEF 73
>UniRef50_Q9XU67 Cluster: Putative uncharacterized protein rbd-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein rbd-1 - Caenorhabditis elegans
Length = 872
Score = 39.5 bits (88), Expect = 0.031
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 119 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
NL Y T +DL+ +F++ GEV ++ + D+ T +GFA V F
Sbjct: 285 NLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEF 327
>UniRef50_Q9XTZ2 Cluster: Putative uncharacterized protein rsp-8;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein rsp-8 - Caenorhabditis elegans
Length = 309
Score = 39.5 bits (88), Expect = 0.031
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELV 259
L V NL+ TT +DLR VF GE+ + DR + SRGF F+ +F L+
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFI-YFNLI 127
>UniRef50_Q9UAF2 Cluster: Musashi; n=1; Halocynthia roretzi|Rep:
Musashi - Halocynthia roretzi (Sea squirt)
Length = 335
Score = 39.5 bits (88), Expect = 0.031
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
D + + + L +T + LR FE GEV + + +D+ T SRGF FV+F + ++ K
Sbjct: 6 DEVGKIFIGGLARQTEDDGLRAYFESFGEVVESIVMKDKVTGFSRGFGFVKFSDQQSVSK 65
>UniRef50_Q8WSM6 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 336
Score = 39.5 bits (88), Expect = 0.031
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L + L++ TT E L F + G V D + RD T+ SRGF FV F
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
>UniRef50_Q8IE99 Cluster: Splicing factor, putative; n=1; Plasmodium
falciparum 3D7|Rep: Splicing factor, putative -
Plasmodium falciparum (isolate 3D7)
Length = 864
Score = 39.5 bits (88), Expect = 0.031
Identities = 15/37 (40%), Positives = 27/37 (72%)
Frame = +2
Query: 137 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
T ++L+++F G++ D+ I RD YT +S+GF F++F
Sbjct: 601 TEQELKQLFNPFGDILDVEIHRDPYTGKSKGFGFIQF 637
>UniRef50_Q5CRV5 Cluster: SPAC25G10.01-like RRM domain containing
protein; n=2; Cryptosporidium|Rep: SPAC25G10.01-like RRM
domain containing protein - Cryptosporidium parvum Iowa
II
Length = 253
Score = 39.5 bits (88), Expect = 0.031
Identities = 21/50 (42%), Positives = 30/50 (60%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
D +L V L+ +T +DLRR+FE GEV D ++ + + ESR F FV
Sbjct: 68 DPSCTLYVCRLSLKTKEDDLRRLFEDYGEVTDCHLVTNPLSGESRCFGFV 117
>UniRef50_Q5BYS2 Cluster: SJCHGC02231 protein; n=3; Schistosoma
japonicum|Rep: SJCHGC02231 protein - Schistosoma
japonicum (Blood fluke)
Length = 216
Score = 39.5 bits (88), Expect = 0.031
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 107 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
L V NL Y T +L ++F G + DI++ D +++ S+GFAFV +
Sbjct: 110 LFVRNLPYDCTENELEKLFSPYGPLSDIHLAFDSWSQVSKGFAFVTY 156
>UniRef50_Q5BW90 Cluster: SJCHGC05136 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05136 protein - Schistosoma
japonicum (Blood fluke)
Length = 184
Score = 39.5 bits (88), Expect = 0.031
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 98 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
+ + V L Y TT E LR F++ G + + + DR T +SRG+ FV
Sbjct: 11 LTKIFVGGLPYHTTDESLRCFFDQFGPIDEAVVITDRQTGKSRGYGFV 58
>UniRef50_Q57YP5 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 184
Score = 39.5 bits (88), Expect = 0.031
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 110 KVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
K DN TTPE+L +F CG + + + RDR T E +G A+V F
Sbjct: 113 KGDNGGPTTTPEELAHLFADCGPILNCTLLRDRTTGELKGTAYVEF 158
>UniRef50_A7AN88 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 643
Score = 39.5 bits (88), Expect = 0.031
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
+ NL+Y TT E +R +F CGEV IP+ +S G F+ F
Sbjct: 481 IRNLSYNTTEETMRELFSECGEVIRCVIPKFEENGKSMGRCFIGF 525
>UniRef50_A5K747 Cluster: RNA binding protein, putative; n=4;
Plasmodium|Rep: RNA binding protein, putative -
Plasmodium vivax
Length = 322
Score = 39.5 bits (88), Expect = 0.031
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
DG +L V NL+ + T L+ +FE G + Y+ + TRESR F FV F
Sbjct: 88 DG-TTLYVSNLSSKITTSRLQDIFEEYGTIEKCYVISNPITRESRNFGFVTF 138
>UniRef50_A0E382 Cluster: Chromosome undetermined scaffold_76, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_76,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 39.5 bits (88), Expect = 0.031
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKKPWTR 283
+L V L Y TT + LR+ FE G + I I RD + RG+AF+ + ++K+ +
Sbjct: 147 TLFVGRLNYATTDKKLRKEFEEYGPIKSIRIIRDSTQDKPRGYAFIEYESKNSVKQAYKY 206
Query: 284 WTDE 295
D+
Sbjct: 207 AVDK 210
>UniRef50_Q5K9M4 Cluster: Eukaryotic translation initiation factor
3, subunit 4 delta, 44kDa, putative; n=1; Filobasidiella
neoformans|Rep: Eukaryotic translation initiation factor
3, subunit 4 delta, 44kDa, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 290
Score = 39.5 bits (88), Expect = 0.031
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +2
Query: 92 DGMVSLKVDNLTYRTTPEDLRRVFE---RCGEVGDIYIPRDRYTRESRGFAFVRF 247
D + +L+V +L+ +DLR +F+ + G++G I RDR TR S+G AFV F
Sbjct: 201 DELPTLRVTSLSIDAEEDDLRALFQPFAKNGKLGRANIVRDRNTRVSKGLAFVSF 255
>UniRef50_A1DIK1 Cluster: Translation initiation factor 4B; n=8;
Eurotiomycetidae|Rep: Translation initiation factor 4B -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 512
Score = 39.5 bits (88), Expect = 0.031
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFELVTLKK 271
V NL++ T D+ +F CG V ++ I D+ TR +GF +V F + LKK
Sbjct: 90 VGNLSFEATSADINDLFAGCG-VTNVRIVEDKLTRTPKGFGYVEFETVDGLKK 141
>UniRef50_Q9H0Z9 Cluster: RNA-binding protein 38; n=16;
Eutheria|Rep: RNA-binding protein 38 - Homo sapiens
(Human)
Length = 216
Score = 39.5 bits (88), Expect = 0.031
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 113 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFV 241
V L Y TT LR+ FE G++ + + DR T +SRG+ FV
Sbjct: 15 VGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFV 57
>UniRef50_Q86U42 Cluster: Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)- binding protein
II) (PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1); n=58;
Coelomata|Rep: Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)- binding protein
II) (PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) - Homo sapiens
(Human)
Length = 306
Score = 39.5 bits (88), Expect = 0.031
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 104 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
S+ V N+ Y T E+L F CG V + I D+++ +GFA++ F
Sbjct: 173 SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEF 220
>UniRef50_UPI00015B6013 Cluster: PREDICTED: similar to GA12086-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA12086-PA - Nasonia vitripennis
Length = 489
Score = 39.1 bits (87), Expect = 0.041
Identities = 13/35 (37%), Positives = 26/35 (74%)
Frame = +2
Query: 143 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
E+LR+ FE+ G + DI++ +DR T E++G ++++
Sbjct: 40 EELRKAFEKFGNIEDIWVVKDRNTGENKGVTYIKY 74
Score = 34.3 bits (75), Expect = 1.2
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 137 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 247
T +L++ F + G + + + +DR T ES+GF +V+F
Sbjct: 133 TDSELQQEFSKFGAIEYVTVVKDRSTNESKGFGYVKF 169
>UniRef50_UPI0000E4688E Cluster: PREDICTED: similar to La
ribonucleoprotein domain family, member 7; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
La ribonucleoprotein domain family, member 7 -
Strongylocentrotus purpuratus
Length = 638
Score = 39.1 bits (87), Expect = 0.041
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 11 IVLFNLFDLS*ISILLKMSYGRPPPRID-GMVSLKVDNLTYRTTPEDLRRVFERCGEVGD 187
I L + LS + +K PP+ D ++ V+ L + + LR+ F CG+V
Sbjct: 89 IQLSAILKLSEDQLFVKRRKTLKPPKYDPDDCTVYVECLPKKADHDLLRKAFSYCGKVVY 148
Query: 188 IYIPRDRYTRESRGFAFVRF 247
+ +PR + T + +GFAF+ F
Sbjct: 149 VSLPRYKSTSDIKGFAFIEF 168
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,895,461
Number of Sequences: 1657284
Number of extensions: 7489593
Number of successful extensions: 22003
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 21181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21991
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -