Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0320
         (440 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.74 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   2.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   6.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 0.74
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -2

Query: 379 ACDRNDSCMAMRGDHIAPSEREVPCRPTFVRPSCPG 272
           AC  N +C+   G        E  C P FV P C G
Sbjct: 268 ACHNNGTCLDKVGGF------ECKCPPGFVGPRCEG 297


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = -3

Query: 333 SRHLNAKFPAVQHSSVHRVQGFFSVTSSKNLTKAN 229
           ++HL      + ++ +H + G F++ + K L +AN
Sbjct: 410 AQHLQKTTTFMNYTDLHDLWGEFTLKALKRLERAN 444


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 402 GGNXTWTXPAIVTTPVW 352
           GG      P +VTTP W
Sbjct: 39  GGRRRAARPGVVTTPRW 55


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 323 RWRDMVAPHRHTGVV 367
           RWRD +    H+GVV
Sbjct: 310 RWRDRIYDAIHSGVV 324


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -2

Query: 295 FVRPSCPGLLQRHELEKPHEGESSTFPCVPISG 197
           F R S  GL+  H    PH    S+ P +   G
Sbjct: 221 FYRFSPTGLIPPHPGLSPHPPHLSSHPAIVTPG 253


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -2

Query: 295 FVRPSCPGLLQRHELEKPHEGESSTFPCVPISG 197
           F R S  GL+  H    PH    S+ P +   G
Sbjct: 113 FYRFSPTGLIPPHPGLSPHPPHLSSHPAIVTPG 145


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 224 YFPLCTDLWECRYHQLLRTFRKRGVSLQAS 135
           +F +C D        ++  FRKR V+ + S
Sbjct: 77  FFAICCDFIALIVVNIVHVFRKRRVNYKDS 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,567
Number of Sequences: 336
Number of extensions: 1819
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)