Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0319
(644 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 24 0.93
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 3.8
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 5.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.0
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 6.6
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 6.6
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 6.6
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 21 8.7
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 21 8.7
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 24.2 bits (50), Expect = 0.93
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 252 GTHKRPAGCSLSKSTYLSHSKGNKS 326
G K P GC + + ++SH N S
Sbjct: 217 GKRKNPNGCDIKATFFVSHKYTNYS 241
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 22.2 bits (45), Expect = 3.8
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 240 STNIGTHKRPAGCSLSKSTYLSHSKGNKSILL 335
S N G H S +K + S GN I+L
Sbjct: 115 SPNFGAHWMKESISFAKVKLTNKSNGNGQIML 146
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = -1
Query: 479 FENAK*YYLSNNRSSCPEKDIFVEYR*PIAYEVPNY 372
+ ++K + + R +CP+ EY+ + Y + N+
Sbjct: 218 WNHSKVHIREDKRLTCPKCPFITEYKHHLEYHLRNH 253
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 440 SSCPEKDIFVEYR*PIAYEVPNYMIRQTNI 351
SS P KD+F A+E NY R+ ++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSL 1541
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 440 SSCPEKDIFVEYR*PIAYEVPNYMIRQTNI 351
SS P KD+F A+E NY R+ ++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSL 1541
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 440 SSCPEKDIFVEYR*PIAYEVPNYMIRQTNI 351
SS P KD+F A+E NY R+ ++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSL 1541
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 440 SSCPEKDIFVEYR*PIAYEVPNYMIRQTNI 351
SS P KD+F A+E NY R+ ++
Sbjct: 1512 SSIPAKDVFENGHVNKAFEEDNYDHRRNSL 1541
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +3
Query: 252 GTHKRPAGCSLSKSTYLSHSKGNKS 326
G P GC + + ++SH N S
Sbjct: 209 GNRANPNGCQIRGTFFVSHKYTNYS 233
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 21.4 bits (43), Expect = 6.6
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +3
Query: 252 GTHKRPAGCSLSKSTYLSHSKGNKS 326
G P GC + + ++SH N S
Sbjct: 216 GNRANPNGCQIRGTFFVSHKYTNYS 240
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 301 KYVLFDREHPAGRLCV 254
+YVL + ++P R CV
Sbjct: 34 EYVLLNEDNPCARKCV 49
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -3
Query: 267 DVYACQYWLITSYLAEYLRNIFSCFILLV 181
D++ + L T Y + L + SC + L+
Sbjct: 276 DIFGWSFLLFTLYSSLLLLDYVSCVVALI 304
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 21.0 bits (42), Expect = 8.7
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -3
Query: 267 DVYACQYWLITSYLAEYLRNIFSCFILLV 181
D++ + L T Y + L + SC + L+
Sbjct: 202 DIFGWSFLLFTLYSSLLLLDYVSCVVALI 230
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,976
Number of Sequences: 336
Number of extensions: 3113
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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