Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0319
         (644 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U38846-1|AAC50384.1|  539|Homo sapiens stimulator of TAR RNA bin...    34   0.50 
BC106934-1|AAI06935.1|  539|Homo sapiens chaperonin containing T...    34   0.50 
BC106933-1|AAI06934.1|  539|Homo sapiens chaperonin containing T...    34   0.50 
BC014676-1|AAH14676.1|  250|Homo sapiens Unknown (protein for IM...    34   0.50 
AF026291-1|AAC96010.1|  539|Homo sapiens chaperonin containing t...    34   0.50 
AC107081-1|AAY24140.1|  539|Homo sapiens unknown protein.              34   0.50 
BC019066-1|AAH19066.1|  437|Homo sapiens solute carrier family 1...    31   4.6  
BC012048-1|AAH12048.2|  437|Homo sapiens solute carrier family 1...    31   4.6  
AY704414-1|AAW30130.1|  437|Homo sapiens bile acid transporter S...    31   4.6  

>U38846-1|AAC50384.1|  539|Homo sapiens stimulator of TAR RNA
           binding protein.
          Length = 539

 Score = 33.9 bits (74), Expect = 0.50
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +1

Query: 4   LATETVRAILKIDDIIN 54
           LATETVR+ILKIDD++N
Sbjct: 521 LATETVRSILKIDDVVN 537


>BC106934-1|AAI06935.1|  539|Homo sapiens chaperonin containing
           TCP1, subunit 4 (delta) protein.
          Length = 539

 Score = 33.9 bits (74), Expect = 0.50
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +1

Query: 4   LATETVRAILKIDDIIN 54
           LATETVR+ILKIDD++N
Sbjct: 521 LATETVRSILKIDDVVN 537


>BC106933-1|AAI06934.1|  539|Homo sapiens chaperonin containing
           TCP1, subunit 4 (delta) protein.
          Length = 539

 Score = 33.9 bits (74), Expect = 0.50
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +1

Query: 4   LATETVRAILKIDDIIN 54
           LATETVR+ILKIDD++N
Sbjct: 521 LATETVRSILKIDDVVN 537


>BC014676-1|AAH14676.1|  250|Homo sapiens Unknown (protein for
           IMAGE:4158571) protein.
          Length = 250

 Score = 33.9 bits (74), Expect = 0.50
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +1

Query: 4   LATETVRAILKIDDIIN 54
           LATETVR+ILKIDD++N
Sbjct: 232 LATETVRSILKIDDVVN 248


>AF026291-1|AAC96010.1|  539|Homo sapiens chaperonin containing
           t-complex polypeptide 1, delta subunit protein.
          Length = 539

 Score = 33.9 bits (74), Expect = 0.50
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +1

Query: 4   LATETVRAILKIDDIIN 54
           LATETVR+ILKIDD++N
Sbjct: 521 LATETVRSILKIDDVVN 537


>AC107081-1|AAY24140.1|  539|Homo sapiens unknown protein.
          Length = 539

 Score = 33.9 bits (74), Expect = 0.50
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +1

Query: 4   LATETVRAILKIDDIIN 54
           LATETVR+ILKIDD++N
Sbjct: 521 LATETVRSILKIDDVVN 537


>BC019066-1|AAH19066.1|  437|Homo sapiens solute carrier family 10
           (sodium/bile acid cotransporter family), member 4
           protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 22/47 (46%), Positives = 26/47 (55%)
 Frame = -2

Query: 427 KRTSLWNTGSQSPTKFLTT*LDKLIFPTQ*MSKMDLFPLLCDKYVLF 287
           KRT    TGSQ+    L T + KL FP Q +  M +FPLL   Y LF
Sbjct: 329 KRTVCLETGSQNVQ--LCTAILKLAFPPQFIGSMYMFPLL---YALF 370


>BC012048-1|AAH12048.2|  437|Homo sapiens solute carrier family 10
           (sodium/bile acid cotransporter family), member 4
           protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 22/47 (46%), Positives = 26/47 (55%)
 Frame = -2

Query: 427 KRTSLWNTGSQSPTKFLTT*LDKLIFPTQ*MSKMDLFPLLCDKYVLF 287
           KRT    TGSQ+    L T + KL FP Q +  M +FPLL   Y LF
Sbjct: 329 KRTVCLETGSQNVQ--LCTAILKLAFPPQFIGSMYMFPLL---YALF 370


>AY704414-1|AAW30130.1|  437|Homo sapiens bile acid transporter
           SLC10A4 protein.
          Length = 437

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 22/47 (46%), Positives = 26/47 (55%)
 Frame = -2

Query: 427 KRTSLWNTGSQSPTKFLTT*LDKLIFPTQ*MSKMDLFPLLCDKYVLF 287
           KRT    TGSQ+    L T + KL FP Q +  M +FPLL   Y LF
Sbjct: 329 KRTVCLETGSQNVQ--LCTAILKLAFPPQFIGSMYMFPLL---YALF 370


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,408,154
Number of Sequences: 237096
Number of extensions: 1641501
Number of successful extensions: 2221
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2221
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)