Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0319
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113371-1|AAM29376.1| 1237|Drosophila melanogaster LP01827p pro...    40   0.002
AE014298-2399|AAF48606.2| 1342|Drosophila melanogaster CG4301-PA...    40   0.002
AY128484-1|AAM75077.1|  533|Drosophila melanogaster RE61939p pro...    34   0.19 
AE014134-2227|AAF53210.1|  533|Drosophila melanogaster CG5525-PA...    34   0.19 

>AY113371-1|AAM29376.1| 1237|Drosophila melanogaster LP01827p protein.
          Length = 1237

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
 Frame = -3

Query: 324  IYSPYYAINTCFSIENTLLDVY-ACQYWLITSYLAEYLRNI-FSCFILLVADWCVTSYLN 151
            ++ PY+ +   F+I ++++  Y A  ++   + L  Y + + FSCF  L+  W V   +N
Sbjct: 1072 LHWPYFLMWVLFAIYHSVIIFYFAFCFFYYNNVLLNYGQTVAFSCFGTLLM-WTVVVVVN 1130

Query: 150  IKLS*NNYVVD*QD*YFVKIHFLVFTFLANSWIYNVINFEYST 22
            +KL   +  +     Y   I   +  F+  + IYNVIN +Y T
Sbjct: 1131 LKLWLESMYLSFW--YIFTIIISILGFVVTTVIYNVINLDYDT 1171


>AE014298-2399|AAF48606.2| 1342|Drosophila melanogaster CG4301-PA
            protein.
          Length = 1342

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
 Frame = -3

Query: 324  IYSPYYAINTCFSIENTLLDVY-ACQYWLITSYLAEYLRNI-FSCFILLVADWCVTSYLN 151
            ++ PY+ +   F+I ++++  Y A  ++   + L  Y + + FSCF  L+  W V   +N
Sbjct: 1177 LHWPYFLMWVLFAIYHSVIIFYFAFCFFYYNNVLLNYGQTVAFSCFGTLLM-WTVVVVVN 1235

Query: 150  IKLS*NNYVVD*QD*YFVKIHFLVFTFLANSWIYNVINFEYST 22
            +KL   +  +     Y   I   +  F+  + IYNVIN +Y T
Sbjct: 1236 LKLWLESMYLSFW--YIFTIIISILGFVVTTVIYNVINLDYDT 1276


>AY128484-1|AAM75077.1|  533|Drosophila melanogaster RE61939p
           protein.
          Length = 533

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +1

Query: 4   LATETVRAILKIDDIIN 54
           LATET+R+ILKIDDI+N
Sbjct: 514 LATETIRSILKIDDIVN 530


>AE014134-2227|AAF53210.1|  533|Drosophila melanogaster CG5525-PA
           protein.
          Length = 533

 Score = 33.9 bits (74), Expect = 0.19
 Identities = 14/17 (82%), Positives = 17/17 (100%)
 Frame = +1

Query: 4   LATETVRAILKIDDIIN 54
           LATET+R+ILKIDDI+N
Sbjct: 514 LATETIRSILKIDDIVN 530


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,463,437
Number of Sequences: 53049
Number of extensions: 488062
Number of successful extensions: 884
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)