Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0319
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75554-9|CAA99952.2|  278|Caenorhabditis elegans Hypothetical pr...    32   0.30 
AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA ...    30   1.2  
AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid de...    30   1.2  
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...    30   1.6  
Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U64834-3|AAB04824.1|  437|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z83216-2|CAB05673.1|  315|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z68004-3|CAA91983.2|  380|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z75554-9|CAA99952.2|  278|Caenorhabditis elegans Hypothetical
           protein ZC455.11 protein.
          Length = 278

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 17/40 (42%), Positives = 26/40 (65%)
 Frame = +3

Query: 279 SLSKSTYLSHSKGNKSILLIY*VGNISLSNHVVRNFVGDW 398
           +LS + Y+ HS G   IL+I+   N+ L+ H++R FV DW
Sbjct: 3   NLSTAYYVFHSVG---ILMIF--SNLVLNLHILRKFVNDW 37


>AF260243-1|AAF97549.1|  338|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-7 protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -3

Query: 294 CFSIENTLLDVYACQYWLITSYLAEYLRNIFSCFILLVADWCVTS 160
           CF +  T++ VY   +W  T+++A Y+   F     L A WC+ S
Sbjct: 202 CFILP-TIIPVY---FWKETAFIAFYVAGTFRYCFTLHATWCINS 242


>AF022972-8|AAC48239.1|  338|Caenorhabditis elegans Fatty acid
           desaturase protein 7 protein.
          Length = 338

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -3

Query: 294 CFSIENTLLDVYACQYWLITSYLAEYLRNIFSCFILLVADWCVTS 160
           CF +  T++ VY   +W  T+++A Y+   F     L A WC+ S
Sbjct: 202 CFILP-TIIPVY---FWKETAFIAFYVAGTFRYCFTLHATWCINS 242


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 294 CFSIENTLLDVYACQYWLITSYLAEYLRNIFSCFILLVADWCVTS 160
           C  I  T++ VY   +W  T+++A Y    F     L A WC+ S
Sbjct: 202 CCFILPTIIPVY---FWKETAFIAFYTAGTFRYCFTLHATWCINS 243


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 294 CFSIENTLLDVYACQYWLITSYLAEYLRNIFSCFILLVADWCVTS 160
           C  I  T++ VY   +W  T+++A Y    F     L A WC+ S
Sbjct: 202 CCFILPTIIPVY---FWKETAFIAFYTAGTFRYCFTLHATWCINS 243


>Z79754-1|CAB02090.1|  457|Caenorhabditis elegans Hypothetical
           protein F25H2.1 protein.
          Length = 457

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -3

Query: 351 FPLSR*VRWIYSPYYAINTCFSIENTLLDVYACQ--YWLIT 235
           + L   +R IY+ Y  +N C SI   ++DV  CQ  Y+ IT
Sbjct: 323 YALQEKIRSIYAEY-PVNECMSITEYVMDVLNCQLNYFQIT 362


>U64834-3|AAB04824.1|  437|Caenorhabditis elegans Hypothetical
           protein F54D11.1 protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = +3

Query: 309 SKGNKSILLIY*VGNISLSNHVVRNFVGDWLPVFHKDVLFWATASII 449
           S GN + L +Y V  +  SN+V +NF+ D++ VF K V    T + I
Sbjct: 131 SDGNNTGLDLYTVDQVEHSNYVEQNFL-DFIFVFRKKVFAPTTDATI 176


>Z83216-2|CAB05673.1|  315|Caenorhabditis elegans Hypothetical
           protein C08F11.2 protein.
          Length = 315

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +2

Query: 401 TGIPQRCPFLGNCFYYWINSIISHFQIASKQ*NL-KPFQLIIYIMMQFVSNFFL*FFTYN 577
           T I     F+  CFYY +  +I+      K  NL   F  I ++ M ++    +  FTY 
Sbjct: 195 TAIFSSMTFITGCFYYHMQKLIAKLSPDIKVNNLIYQFFPIYFVQMLYIFTCAVRIFTYE 254

Query: 578 SHVH 589
              H
Sbjct: 255 LSGH 258


>Z68004-3|CAA91983.2|  380|Caenorhabditis elegans Hypothetical
           protein F47B10.3 protein.
          Length = 380

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -3

Query: 105 YFVKIHFLVFTFLANSWIY-NVINFEYSTHSF 13
           YF+ I+F   ++   SWI+ +V++F YS+  F
Sbjct: 80  YFISIYFYTSSYTFWSWIHDSVVSFCYSSFLF 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,684,101
Number of Sequences: 27780
Number of extensions: 274665
Number of successful extensions: 594
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)