Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0319
         (644 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   2.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   2.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   2.5  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   3.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   7.7  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = -3

Query: 273 LLDVYACQYWLITSYLAEYLRNIFSCFILLVADWCVTSYLN 151
           +  ++ C+ WL    L      +  C I L   W +T  +N
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAIALDRYWAITDPIN 143


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = -3

Query: 273 LLDVYACQYWLITSYLAEYLRNIFSCFILLVADWCVTSYLN 151
           +  ++ C+ WL    L      +  C I L   W +T  +N
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAIALDRYWAITDPIN 143


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = -3

Query: 273 LLDVYACQYWLITSYLAEYLRNIFSCFILLVADWCVTSYLN 151
           +  ++ C+ WL    L      +  C I L   W +T  +N
Sbjct: 103 IFGIHLCKLWLTCDVLCCTASILNLCAIALDRYWAITDPIN 143


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +3

Query: 297 YLSHSKGNKSILLIY*VGNISLSNHVVRNFVGDWLPVFHKDVLFW 431
           Y+    GN S L+++      + +H+++ F    L V      FW
Sbjct: 178 YMLEKSGNFSRLVVFFRFERQIGHHLIQTFAPSTLVVMLSWFSFW 222


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 413 QRCPFLGNCFYYWINSII 466
           +RC F   C + ++N+I+
Sbjct: 141 ERCNFKAYCLFSFLNTIV 158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,796
Number of Sequences: 438
Number of extensions: 3425
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)